←Back to structures
MK448451.1__QBX09593.1__JavanS358_0016__00016
Bact-VirMK448451.1__QBX09593.1__JavanS358_0016__00016
Identity
- Accession:
- MK448451 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-219
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jzaA03 | 1.20.120.1720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 28.0 | 3.22e-01 | 84.5% | 65.4% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.54 | 25.0 | 2.95e-01 | 94.1% | 60.5% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 34.0 | 4.02e-01 | 85.8% | 94.5% |
| 1tu9A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 28.0 | 3.49e-01 | 80.4% | 83.2% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.50 | 27.0 | 2.90e-01 | 94.1% | 58.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3418934 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.57 | 34.0 | 3.48e-01 | 88.1% | 59.1% |
| 3571710 | 5054.1.1.2 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans | 0.57 | 36.0 | 4.03e-01 | 86.8% | 80.0% |
| 3248160 | 5054.1.1.107 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PF26726 | 0.55 | 35.0 | 3.43e-01 | 87.2% | 56.3% |
| 4999598 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.53 | 27.0 | 3.40e-01 | 93.2% | 80.0% |
| 3255942 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 27.0 | 2.56e-01 | 74.4% | 39.2% |
| 3404018 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.52 | 37.0 | 3.12e-01 | 70.3% | 81.4% |
| 3568113 | 174.1.1.14 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN | 0.52 | 24.0 | 3.17e-01 | 90.4% | 76.7% |
| 3336107 | 3562.1.1.11 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG | 0.52 | 28.0 | 3.05e-01 | 96.8% | 61.1% |
| 1108268 | 3770.1.1.1 ↗ | alpha arrays › Flax-rust effector AvrM › Flax-rust effector AvrM › Flax-rust effector AvrM › AvrM-A | 0.51 | 33.0 | 4.00e-01 | 86.3% | 100.0% |
D2
medium
residues 220-367
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.78 | 43.0 | 5.09e-01 | 77.7% | 77.5% |
| 6byoA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.70 | 47.0 | 5.20e-01 | 97.3% | 84.2% |
| 3thxB03 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.64 | 48.0 | 4.47e-01 | 100.0% | 62.0% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.64 | 48.0 | 5.21e-01 | 97.3% | 95.8% |
| 1h6gA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.64 | 51.0 | 5.50e-01 | 96.6% | 100.0% |
| 2l6hA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.64 | 51.0 | 5.12e-01 | 96.6% | 82.5% |
| 1nzeA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.64 | 45.0 | 4.98e-01 | 94.6% | 94.6% |
| 3thxA03 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.64 | 58.0 | 5.04e-01 | 100.0% | 85.1% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.63 | 54.0 | 5.69e-01 | 95.3% | 100.0% |
| 1z23A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.63 | 56.0 | 5.44e-01 | 95.9% | 95.1% |
| 6t0bc02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.63 | 54.0 | 4.94e-01 | 98.6% | 71.7% |
| 5figA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.62 | 36.0 | 4.24e-01 | 89.2% | 83.0% |
| 2yevA03 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.62 | 55.0 | 5.09e-01 | 98.6% | 76.6% |
| 2l81A00 | 1.20.120.830 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Serine-rich domain | 0.61 | 55.0 | 5.24e-01 | 100.0% | 94.9% |
| 4mndA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.60 | 44.0 | 4.09e-01 | 97.3% | 59.2% |
| 6qumA04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.60 | 38.0 | 3.82e-01 | 79.1% | 62.4% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.60 | 45.0 | 4.65e-01 | 97.3% | 82.5% |
| 4oo2A02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 44.0 | 3.93e-01 | 76.4% | 80.1% |
| 2etsA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.59 | 43.0 | 4.78e-01 | 98.0% | 97.4% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.59 | 37.0 | 4.11e-01 | 89.2% | 79.5% |
| 3vr4B04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.58 | 37.0 | 3.73e-01 | 79.7% | 62.3% |
| 2oexA02 | 1.20.140.50 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › alix/aip1 like domains | 0.58 | 44.0 | 4.02e-01 | 79.1% | 83.2% |
| 3am6A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 53.0 | 4.62e-01 | 100.0% | 83.0% |
| 3ddlA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 53.0 | 4.41e-01 | 100.0% | 84.1% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 37.0 | 4.48e-01 | 86.5% | 98.0% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.57 | 36.0 | 4.32e-01 | 87.2% | 94.8% |
| 1t72A02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.57 | 35.0 | 4.23e-01 | 84.5% | 91.8% |
| 1s05A00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.57 | 46.0 | 4.84e-01 | 94.6% | 98.4% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 39.0 | 3.63e-01 | 70.9% | 55.2% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 35.0 | 4.12e-01 | 87.2% | 88.7% |
| 2nrjA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.56 | 41.0 | 3.18e-01 | 76.4% | 74.2% |
| 3eabE00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 33.0 | 4.10e-01 | 79.1% | 100.0% |
| 4wjg400 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.55 | 41.0 | 3.40e-01 | 77.0% | 78.2% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.55 | 37.0 | 4.34e-01 | 79.7% | 100.0% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 35.0 | 4.18e-01 | 81.8% | 100.0% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.55 | 35.0 | 4.09e-01 | 85.1% | 89.7% |
| 4cbeA00 | 1.20.120.1640 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 50.0 | 4.41e-01 | 98.6% | 71.3% |
| 3edvB01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 35.0 | 3.69e-01 | 89.2% | 70.6% |
| 1a5tA03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.53 | 36.0 | 4.03e-01 | 88.5% | 87.9% |
| 3x29A00 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.53 | 41.0 | 3.92e-01 | 79.1% | 87.3% |
| 7dl9A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 41.0 | 3.76e-01 | 95.3% | 61.9% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.53 | 36.0 | 3.84e-01 | 91.9% | 78.0% |
| 3ripA02 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.53 | 45.0 | 3.67e-01 | 92.6% | 69.9% |
| 3x3bA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 47.0 | 3.88e-01 | 99.3% | 80.1% |
| 2b1eA04 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.52 | 39.0 | 4.20e-01 | 98.0% | 90.6% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 37.0 | 4.24e-01 | 97.3% | 98.2% |
| 2gsqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 36.0 | 4.14e-01 | 98.0% | 98.1% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.51 | 39.0 | 4.28e-01 | 82.4% | 97.5% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 33.0 | 3.79e-01 | 91.9% | 87.2% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.51 | 40.0 | 4.30e-01 | 96.6% | 95.4% |
| 4ocqA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.51 | 39.0 | 3.41e-01 | 83.1% | 86.7% |
| 7qoaA01 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.50 | 45.0 | 3.36e-01 | 98.6% | 54.1% |
| 1bucA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 35.0 | 3.79e-01 | 95.9% | 85.4% |
| 2r4rA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.50 | 45.0 | 4.01e-01 | 100.0% | 84.3% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5079439 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.77 | 52.0 | 6.02e-01 | 94.6% | 95.2% |
| 3964598 | 192.29.1.104 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4149 | 0.71 | 61.0 | 6.21e-01 | 97.3% | 92.4% |
| 3273757 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.71 | 53.0 | 5.94e-01 | 98.6% | 100.0% |
| 3720884 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.69 | 52.0 | 5.20e-01 | 77.7% | 83.3% |
| 5030859 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.69 | 45.0 | 4.97e-01 | 98.0% | 81.7% |
| 4006018 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.68 | 41.0 | 4.86e-01 | 94.6% | 88.0% |
| 3513671 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.68 | 43.0 | 5.14e-01 | 97.3% | 95.9% |
| 3221996 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.68 | 55.0 | 5.47e-01 | 96.6% | 82.7% |
| 5054182 | 3883.1.1.1 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf | 0.68 | 43.0 | 4.32e-01 | 97.3% | 61.3% |
| 3856031 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 52.0 | 5.65e-01 | 98.6% | 96.0% |
| 3698208 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.67 | 44.0 | 4.56e-01 | 77.0% | 69.3% |
| 3696269 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.67 | 44.0 | 4.45e-01 | 79.7% | 65.5% |
| 3620230 | 601.1.1.68 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › RHG29_45_N | 0.67 | 49.0 | 5.22e-01 | 100.0% | 86.9% |
| 3279521 | 1075.5.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter | 0.65 | 48.0 | 4.44e-01 | 98.0% | 59.5% |
| 4580475 | 3684.1.1.28 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PF26154 | 0.65 | 49.0 | 5.22e-01 | 97.3% | 92.8% |
| 4023374 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.64 | 46.0 | 4.83e-01 | 75.0% | 80.0% |
| 3517291 | 192.29.1.24 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › TMEM237 | 0.64 | 58.0 | 5.41e-01 | 97.3% | 86.7% |
| 3953704 | 601.33.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › CHAD | 0.64 | 56.0 | 5.62e-01 | 100.0% | 93.3% |
| 4955246 | 5073.1.3.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Potassium-transporting ATPase subunit KdpB transmembrane domain | 0.64 | 45.0 | 3.94e-01 | 96.6% | 47.0% |
| 4944283 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 49.0 | 5.10e-01 | 97.3% | 87.1% |
| 4941262 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.63 | 36.0 | 4.26e-01 | 86.5% | 79.6% |
| 4992531 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.62 | 48.0 | 5.31e-01 | 91.9% | 100.0% |
| 5081365 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.62 | 55.0 | 5.56e-01 | 98.6% | 97.9% |
| 3291574 | 192.29.1.248 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF27150 | 0.62 | 46.0 | 4.97e-01 | 98.0% | 92.8% |
| 3544880 | 601.39.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Enhancer of filamentation 1 › Enhancer of filamentation 1 › Serine_rich | 0.62 | 55.0 | 5.36e-01 | 97.3% | 93.3% |
| 4881515 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.62 | 49.0 | 5.28e-01 | 100.0% | 100.0% |
| 4501305 | 601.4.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_MCP_1 | 0.62 | 49.0 | 4.80e-01 | 99.3% | 77.5% |
| 2758046 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.62 | 49.0 | 5.21e-01 | 95.3% | 98.4% |
| 3943911 | 192.29.1.3 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › YliH | 0.61 | 46.0 | 5.04e-01 | 97.3% | 98.3% |
| 4974664 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 43.0 | 4.64e-01 | 98.0% | 87.5% |
| 5005799 | 5069.1.1.15 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm | 0.61 | 51.0 | 4.56e-01 | 98.0% | 63.3% |
| 3444933 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.60 | 45.0 | 4.62e-01 | 77.0% | 78.6% |
| 3387959 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.60 | 50.0 | 5.14e-01 | 100.0% | 92.9% |
| 3228670 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.60 | 48.0 | 5.12e-01 | 99.3% | 97.7% |
| 3407695 | 4177.1.1.38 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Tektin | 0.60 | 45.0 | 3.78e-01 | 77.7% | 78.0% |
| 3299515 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.60 | 45.0 | 4.49e-01 | 77.0% | 77.3% |
| 3665289 | 109.3.1.31 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF4220 | 0.59 | 47.0 | 3.94e-01 | 85.1% | 57.3% |
| 3039953 | 5001.1.1.6 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin | 0.59 | 54.0 | 4.47e-01 | 100.0% | 81.2% |
| 3213535 | 5001.1.1.54 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srbc | 0.58 | 45.0 | 3.62e-01 | 81.1% | 44.8% |
| 3393914 | 5054.1.1.9 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel | 0.57 | 49.0 | 4.02e-01 | 99.3% | 49.3% |
| 4987042 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.57 | 46.0 | 4.80e-01 | 97.3% | 92.6% |
| 3967393 | 601.4.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_MCP_1 | 0.57 | 46.0 | 4.21e-01 | 99.3% | 64.0% |
| 3654565 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.57 | 40.0 | 4.09e-01 | 73.0% | 73.8% |
| 4647884 | 601.2.1.7 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › HBM | 0.57 | 48.0 | 5.04e-01 | 95.3% | 100.0% |
| 3783832 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.57 | 49.0 | 5.05e-01 | 97.3% | 98.6% |
| 3788932 | 192.29.1.165 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29336 | 0.56 | 51.0 | 4.71e-01 | 98.0% | 82.7% |
| 4446394 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 42.0 | 3.51e-01 | 78.4% | 44.6% |
| 4021907 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 39.0 | 3.84e-01 | 76.4% | 65.6% |
| 3390116 | 5054.1.1.9 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PKD_channel | 0.56 | 50.0 | 3.99e-01 | 99.3% | 48.8% |
| 5053576 | 192.29.1.305 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4386 | 0.56 | 48.0 | 4.18e-01 | 94.6% | 100.0% |
| 3785838 | 5069.1.1.4 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct | 0.55 | 49.0 | 4.12e-01 | 100.0% | 85.7% |
| 2475522 | 5001.1.1.6 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin | 0.55 | 50.0 | 4.09e-01 | 100.0% | 82.1% |
| 3465253 | 109.4.1.541 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4220 | 0.54 | 46.0 | 3.51e-01 | 95.3% | 81.8% |
| 3741788 | 633.21.1.10 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL | 0.54 | 39.0 | 3.91e-01 | 75.7% | 83.9% |
| 3727661 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.54 | 45.0 | 4.62e-01 | 94.6% | 99.3% |
| 3439705 | 3758.1.1.7 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › BPS1 | 0.52 | 46.0 | 4.10e-01 | 98.6% | 66.4% |
| 4093008 | 192.29.1.157 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › MG280 | 0.52 | 45.0 | 3.99e-01 | 96.6% | 98.6% |
| 4931580 | 3543.1.1.2 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › AmiS_UreI | 0.51 | 47.0 | 4.53e-01 | 100.0% | 98.8% |
| 3950415 | 150.8.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › PPE | 0.51 | 41.0 | 3.81e-01 | 86.5% | 90.8% |
| 3393542 | 5057.1.1.0 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore | 0.50 | 44.0 | 4.38e-01 | 97.3% | 100.0% |
| 3593944 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 37.0 | 3.15e-01 | 77.7% | 50.8% |