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MK448526.1__QBX11084.1__JavanS54_0027__00003
Bact-VirMK448526.1__QBX11084.1__JavanS54_0027__00003
Identity
- Accession:
- MK448526 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-71
Domain cluster:
rep: ON464759.1__UTV60862.1__JDFnp1_74__00074__D5-72
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12844.14 best | HTH_19 | 42.0 | 1.00e-10 | 98.6% | 90.6% |
| PF01381.29 | HTH_3 | 47.6 | 1.90e-12 | 89.9% | 96.4% |
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7xi5A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.91 | 62.0 | 7.21e-01 | 85.5% | 96.1% |
| 1y7yA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.89 | 72.0 | 7.29e-01 | 100.0% | 87.0% |
| 3cecA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.88 | 75.0 | 6.72e-01 | 100.0% | 68.1% |
| 2ictA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.88 | 74.0 | 6.96e-01 | 100.0% | 76.5% |
| 2ebyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.88 | 75.0 | 7.14e-01 | 100.0% | 79.7% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 74.0 | 7.55e-01 | 100.0% | 93.9% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 73.0 | 7.50e-01 | 100.0% | 93.9% |
| 3mlfE00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 67.0 | 6.21e-01 | 97.1% | 65.1% |
| 3f51C00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 73.0 | 6.63e-01 | 100.0% | 68.9% |
| 2kpjA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 72.0 | 7.21e-01 | 100.0% | 87.1% |
| 3u3wA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 72.0 | 7.21e-01 | 100.0% | 88.4% |
| 1x57A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.87 | 72.0 | 6.52e-01 | 100.0% | 67.0% |
| 2ofyA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.86 | 70.0 | 7.01e-01 | 98.6% | 85.7% |
| 1r69A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.86 | 71.0 | 7.45e-01 | 100.0% | 96.8% |
| 3ivpD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.86 | 68.0 | 6.63e-01 | 100.0% | 77.3% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.85 | 62.0 | 4.57e-01 | 88.4% | 32.3% |
| 1b0nA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.85 | 72.0 | 6.24e-01 | 100.0% | 61.2% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.85 | 74.0 | 6.86e-01 | 100.0% | 76.2% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.85 | 72.0 | 7.27e-01 | 100.0% | 92.6% |
| 2awiA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.85 | 69.0 | 7.04e-01 | 100.0% | 91.0% |
| 6f8hC00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.84 | 71.0 | 6.41e-01 | 100.0% | 67.7% |
| 2xi8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.84 | 70.0 | 7.20e-01 | 100.0% | 92.4% |
| 2ppxA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.84 | 60.0 | 6.40e-01 | 85.5% | 85.2% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 66.0 | 6.73e-01 | 97.1% | 87.9% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.83 | 60.0 | 6.05e-01 | 87.0% | 75.7% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 65.0 | 6.45e-01 | 100.0% | 81.7% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 70.0 | 6.72e-01 | 100.0% | 81.8% |
| 2bnmA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.82 | 69.0 | 6.74e-01 | 100.0% | 85.1% |
| 3pxpA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 76.0 | 6.75e-01 | 100.0% | 77.4% |
| 4ybaA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 72.0 | 6.95e-01 | 100.0% | 85.7% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.81 | 61.0 | 5.61e-01 | 100.0% | 64.0% |
| 3bs3A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 63.0 | 6.68e-01 | 100.0% | 98.3% |
| 4ghjB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 64.0 | 6.24e-01 | 98.6% | 78.9% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.80 | 66.0 | 6.26e-01 | 100.0% | 76.8% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 62.0 | 6.03e-01 | 94.2% | 76.3% |
| 4jcyA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 69.0 | 6.23e-01 | 100.0% | 71.7% |
| 3fmyA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.79 | 56.0 | 5.78e-01 | 89.9% | 78.8% |
| 3b7hA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 64.0 | 6.27e-01 | 100.0% | 82.9% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 62.0 | 6.12e-01 | 100.0% | 81.9% |
| 7zviA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 72.0 | 5.84e-01 | 100.0% | 69.7% |
| 1y9qA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.78 | 72.0 | 6.67e-01 | 100.0% | 82.4% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 57.0 | 5.83e-01 | 87.0% | 83.1% |
| 3qf3D00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.77 | 69.0 | 5.58e-01 | 100.0% | 60.2% |
| 3fymA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 67.0 | 6.38e-01 | 100.0% | 84.1% |
| 2wusS00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 66.0 | 6.27e-01 | 100.0% | 82.9% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.75 | 58.0 | 6.01e-01 | 88.4% | 89.1% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.73 | 62.0 | 5.77e-01 | 100.0% | 74.2% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 64.0 | 6.03e-01 | 100.0% | 83.3% |
| 2mqkA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 55.0 | 5.67e-01 | 88.4% | 89.2% |
| 2l1pA00 | 1.10.260.70 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › SATB, CULT domain | 0.67 | 53.0 | 5.02e-01 | 92.8% | 72.3% |
| 2jn6A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 43.0 | 4.06e-01 | 72.5% | 87.1% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 37.0 | 3.70e-01 | 88.4% | 60.6% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 44.0 | 3.61e-01 | 88.4% | 69.9% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 44.0 | 3.78e-01 | 92.8% | 70.0% |
| 8e9gE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.52 | 37.0 | 3.86e-01 | 94.2% | 81.0% |
| 1bf2A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 39.0 | 2.47e-01 | 91.3% | 90.7% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4869547 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.94 | 72.0 | 7.35e-01 | 95.7% | 82.1% |
| 3285035 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.93 | 76.0 | 6.83e-01 | 98.6% | 65.6% |
| 4984923 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.93 | 75.0 | 7.05e-01 | 98.6% | 72.5% |
| 4507416 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.92 | 79.0 | 6.56e-01 | 100.0% | 56.4% |
| 5036222 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.92 | 74.0 | 7.63e-01 | 98.6% | 89.2% |
| 3967547 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.92 | 69.0 | 6.93e-01 | 89.9% | 77.1% |
| 3287571 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.92 | 75.0 | 6.87e-01 | 100.0% | 69.4% |
| None | — | 0.91 | 69.0 | 6.88e-01 | 88.4% | 77.1% | |
| 4975718 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.91 | 74.0 | 7.22e-01 | 100.0% | 78.7% |
| 3280943 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.91 | 76.0 | 7.80e-01 | 98.6% | 93.8% |
| None | — | 0.91 | 77.0 | 7.90e-01 | 100.0% | 95.4% | |
| 3972208 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.91 | 76.0 | 7.35e-01 | 100.0% | 81.3% |
| 5015314 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.91 | 74.0 | 6.96e-01 | 100.0% | 73.8% |
| 3336283 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.90 | 68.0 | 7.23e-01 | 88.4% | 90.0% |
| 3958819 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.90 | 74.0 | 7.92e-01 | 98.6% | 100.0% |
| 4982971 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.90 | 72.0 | 6.83e-01 | 98.6% | 72.5% |
| 4950501 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.90 | 73.0 | 7.55e-01 | 100.0% | 90.8% |
| 5003089 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.90 | 76.0 | 7.59e-01 | 100.0% | 88.6% |
| 4969117 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.90 | 73.0 | 6.31e-01 | 100.0% | 59.0% |
| 4978931 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.90 | 76.0 | 7.57e-01 | 100.0% | 88.6% |
| 3947329 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 75.0 | 7.70e-01 | 100.0% | 93.8% |
| 5057975 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 72.0 | 7.02e-01 | 100.0% | 78.7% |
| 4367316 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 75.0 | 6.21e-01 | 100.0% | 53.9% |
| 5059226 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 72.0 | 6.85e-01 | 100.0% | 73.8% |
| 3589299 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 72.0 | 6.25e-01 | 98.6% | 59.0% |
| 3978391 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.89 | 74.0 | 7.41e-01 | 100.0% | 87.1% |
| 3990067 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 75.0 | 7.14e-01 | 100.0% | 77.5% |
| 3989087 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 74.0 | 6.20e-01 | 100.0% | 55.5% |
| 2581392 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.89 | 76.0 | 7.54e-01 | 100.0% | 88.7% |
| None | — | 0.88 | 66.0 | 7.06e-01 | 88.4% | 90.0% | |
| 3277880 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 75.0 | 7.26e-01 | 100.0% | 82.7% |
| 4860587 | 101.1.1.9 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 | 0.88 | 74.0 | 7.06e-01 | 100.0% | 79.5% |
| 4393390 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 76.0 | 6.72e-01 | 100.0% | 66.3% |
| 3591049 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 73.0 | 5.53e-01 | 100.0% | 40.7% |
| 352428 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.88 | 73.0 | 6.64e-01 | 100.0% | 68.5% |
| 4075146 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.88 | 75.0 | 5.95e-01 | 100.0% | 48.5% |
| 5000483 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 70.0 | 6.46e-01 | 98.6% | 68.2% |
| 4484890 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 70.0 | 6.35e-01 | 100.0% | 64.4% |
| 4568698 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 71.0 | 7.63e-01 | 100.0% | 98.3% |
| 3953562 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 74.0 | 7.39e-01 | 100.0% | 88.6% |
| 3969553 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.88 | 73.0 | 7.15e-01 | 100.0% | 82.7% |
| 3588760 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.88 | 76.0 | 6.42e-01 | 100.0% | 60.0% |
| 5046258 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 71.0 | 6.86e-01 | 100.0% | 78.7% |
| 4032323 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 72.0 | 7.41e-01 | 100.0% | 93.8% |
| 4947991 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.87 | 70.0 | 6.86e-01 | 100.0% | 78.7% |
| 137778 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 73.0 | 7.45e-01 | 100.0% | 92.5% |
| 3951505 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 74.0 | 7.24e-01 | 100.0% | 84.0% |
| 5050179 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 68.0 | 7.23e-01 | 100.0% | 95.0% |
| 4061717 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.87 | 74.0 | 6.32e-01 | 100.0% | 60.0% |
| 4300595 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.87 | 73.0 | 6.45e-01 | 100.0% | 65.3% |
| 3587838 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 73.0 | 7.26e-01 | 100.0% | 88.6% |
| 4033847 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 73.0 | 6.22e-01 | 100.0% | 59.0% |
| 5031045 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 70.0 | 6.79e-01 | 100.0% | 78.7% |
| 3978875 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 72.0 | 5.93e-01 | 100.0% | 53.0% |
| 4008186 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 72.0 | 5.92e-01 | 100.0% | 51.7% |
| 5027582 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 69.0 | 6.52e-01 | 100.0% | 72.5% |
| 5061120 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 70.0 | 6.29e-01 | 100.0% | 65.6% |
| 3506728 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 72.0 | 5.81e-01 | 100.0% | 49.6% |
| 3968645 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.86 | 72.0 | 5.89e-01 | 100.0% | 51.7% |
| 5003294 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 71.0 | 6.95e-01 | 100.0% | 82.7% |
| 4461348 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.86 | 64.0 | 6.78e-01 | 89.9% | 90.0% |
| 2773 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.86 | 73.0 | 7.01e-01 | 100.0% | 81.8% |
| 3964522 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 65.0 | 6.78e-01 | 89.9% | 87.3% |
| 5057753 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 70.0 | 6.44e-01 | 100.0% | 70.6% |
| 3587893 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 71.0 | 6.21e-01 | 100.0% | 62.0% |
| 3062945 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 68.0 | 6.75e-01 | 98.6% | 83.1% |
| 3965656 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.85 | 70.0 | 6.63e-01 | 100.0% | 76.2% |
| 5037143 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 70.0 | 6.66e-01 | 100.0% | 76.2% |
| 5083215 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.84 | 70.0 | 7.19e-01 | 100.0% | 95.4% |
| 3286370 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 76.0 | 6.05e-01 | 100.0% | 52.8% |
| 2888862 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.84 | 71.0 | 7.28e-01 | 100.0% | 95.5% |
| 4380868 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 73.0 | 6.12e-01 | 100.0% | 58.2% |
| 4942426 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 68.0 | 7.02e-01 | 100.0% | 90.8% |
| 3285836 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.84 | 74.0 | 6.99e-01 | 100.0% | 81.2% |
| 4425759 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 70.0 | 5.92e-01 | 100.0% | 56.4% |
| 147355 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 72.0 | 6.93e-01 | 100.0% | 82.9% |
| 4589522 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.84 | 67.0 | 6.24e-01 | 100.0% | 69.4% |
| 3277922 | 101.1.4.18 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 | 0.84 | 73.0 | 7.14e-01 | 100.0% | 86.7% |
| 4071576 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 67.0 | 6.20e-01 | 100.0% | 69.4% |
| 4678741 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 71.0 | 6.89e-01 | 100.0% | 84.0% |
| 5030212 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 75.0 | 7.54e-01 | 100.0% | 95.7% |
| 3980119 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 69.0 | 6.92e-01 | 98.6% | 87.1% |
| 5057414 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.83 | 66.0 | 6.60e-01 | 100.0% | 82.9% |
| 3970029 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.83 | 68.0 | 6.46e-01 | 100.0% | 76.2% |
| 2787 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.83 | 60.0 | 6.15e-01 | 87.0% | 79.1% |
| 3970175 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.83 | 68.0 | 6.98e-01 | 100.0% | 93.8% |
| 3952098 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.82 | 66.0 | 6.29e-01 | 98.6% | 75.0% |
| 5080375 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 65.0 | 5.98e-01 | 98.6% | 66.7% |
| 3281537 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 63.0 | 5.92e-01 | 98.6% | 68.2% |
| 4316705 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 66.0 | 6.29e-01 | 100.0% | 75.0% |
| 4392992 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 70.0 | 6.63e-01 | 98.6% | 80.0% |
| 4173793 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.81 | 65.0 | 6.15e-01 | 100.0% | 73.8% |
| 4964308 | 101.1.4.94 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HVO_2718 | 0.80 | 64.0 | 6.62e-01 | 97.1% | 90.8% |
| 4032747 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.79 | 69.0 | 6.42e-01 | 94.2% | 82.4% |
| 4957698 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.77 | 64.0 | 5.14e-01 | 89.9% | 62.0% |
| 5065183 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.76 | 62.0 | 5.65e-01 | 100.0% | 66.3% |
| 3974103 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.76 | 67.0 | 6.30e-01 | 100.0% | 80.0% |
| 4032317 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.76 | 68.0 | 6.19e-01 | 100.0% | 76.7% |
| 3987782 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.73 | 64.0 | 5.69e-01 | 100.0% | 68.0% |
| 4043777 | 101.1.4.16 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 | 0.73 | 64.0 | 5.89e-01 | 100.0% | 75.6% |
D2
medium
residues 90-204
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.68 | 44.0 | 5.33e-01 | 92.2% | 100.0% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 35.0 | 4.39e-01 | 72.2% | 90.6% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.64 | 39.0 | 4.78e-01 | 71.3% | 93.4% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.62 | 48.0 | 4.41e-01 | 81.7% | 64.1% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 36.0 | 3.64e-01 | 72.2% | 60.5% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 42.0 | 4.56e-01 | 93.0% | 91.3% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 49.0 | 4.40e-01 | 90.4% | 91.7% |
| 2qywA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.55 | 39.0 | 4.27e-01 | 89.6% | 89.5% |
| 4egwA02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.54 | 45.0 | 4.52e-01 | 90.4% | 84.9% |
| 4hkaA01 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 45.0 | 3.43e-01 | 93.0% | 52.0% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.53 | 37.0 | 4.26e-01 | 73.9% | 97.6% |
| 3geeA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.53 | 46.0 | 3.97e-01 | 91.3% | 73.8% |
| 1qgrA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 46.0 | 2.77e-01 | 100.0% | 18.8% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3234298 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.93 | 42.0 | 6.26e-01 | 73.0% | 94.5% |
| 3331533 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.79 | 42.0 | 3.86e-01 | 73.0% | 42.7% |
| 4964664 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.70 | 36.0 | 4.57e-01 | 72.2% | 86.2% |
| 3614525 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.65 | 40.0 | 4.12e-01 | 81.7% | 63.6% |
| 4218590 | 507.1.1.0 ↗ | alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related | 0.62 | 47.0 | 4.37e-01 | 79.1% | 90.7% |
| 3547149 | 109.4.1.117 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG,SCD | 0.59 | 47.0 | 3.13e-01 | 84.3% | 42.5% |
| 3219921 | 5001.1.1.84 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srz | 0.59 | 49.0 | 3.62e-01 | 90.4% | 66.3% |
| 3901145 | 109.4.1.1350 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA, PF31007 | 0.58 | 50.0 | 2.86e-01 | 90.4% | 18.8% |
| 3965830 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.56 | 35.0 | 3.74e-01 | 73.0% | 71.0% |
| 3744591 | 109.4.1.150 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core | 0.55 | 47.0 | 2.77e-01 | 91.3% | 12.0% |
| 3774553 | 223.2.1.22 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin | 0.55 | 48.0 | 3.64e-01 | 93.9% | 75.8% |
| 3680397 | 109.4.1.1862 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core, RKP_N, TPR_RNF123 | 0.53 | 48.0 | 2.83e-01 | 100.0% | 20.5% |
| 3875643 | 109.4.1.150 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ufd2P_core | 0.52 | 48.0 | 2.83e-01 | 100.0% | 28.6% |
| 3907116 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 45.0 | 4.14e-01 | 94.8% | 77.3% |
| 3588519 | 101.1.2.49 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C | 0.51 | 45.0 | 3.95e-01 | 94.8% | 95.8% |
| 3918784 | 3289.1.1.11 ↗ | alpha complex topology › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › WASH-7_mid, WASH-4_N, WASH-7_C | 0.51 | 45.0 | 2.60e-01 | 98.3% | 25.3% |