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MK448546.1__QBX11424.1__JavanS571_0016__00002
Bact-VirMK448546.1__QBX11424.1__JavanS571_0016__00002
Identity
- Accession:
- MK448546 ↗
- Kingdom:
- phage
Quality
95.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-39
Domain cluster:
rep: SRR1747035_scaffold_3_prodigal-single.1__X__X__00108__D8-44
CATH (64)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p1jA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.88 | 79.0 | 5.21e-01 | 100.0% | 28.3% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.88 | 64.0 | 4.82e-01 | 100.0% | 34.5% |
| 2h3gX01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.85 | 61.0 | 4.60e-01 | 100.0% | 33.0% |
| 2nrhB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.84 | 60.0 | 3.93e-01 | 100.0% | 19.4% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.79 | 56.0 | 3.62e-01 | 100.0% | 16.8% |
| 1y9wA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.78 | 62.0 | 4.58e-01 | 100.0% | 33.7% |
| 3djcB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.78 | 56.0 | 4.27e-01 | 100.0% | 33.0% |
| 7x3hA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.77 | 54.0 | 3.82e-01 | 97.3% | 24.1% |
| 3d4eA02 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.76 | 65.0 | 5.02e-01 | 100.0% | 44.9% |
| 1s0wC01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.76 | 66.0 | 4.96e-01 | 100.0% | 41.8% |
| 2g3aA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.74 | 58.0 | 4.33e-01 | 100.0% | 33.3% |
| 5g5gB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.73 | 59.0 | 4.55e-01 | 100.0% | 39.4% |
| 3e82E02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.72 | 61.0 | 3.80e-01 | 100.0% | 18.0% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.72 | 58.0 | 4.34e-01 | 100.0% | 38.3% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.72 | 53.0 | 3.52e-01 | 94.6% | 19.0% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.70 | 56.0 | 4.35e-01 | 100.0% | 40.7% |
| 6a97C01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.70 | 60.0 | 4.04e-01 | 100.0% | 26.7% |
| 4fvkA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.70 | 53.0 | 3.06e-01 | 100.0% | 8.4% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.69 | 57.0 | 3.63e-01 | 100.0% | 18.1% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.69 | 53.0 | 4.11e-01 | 100.0% | 37.1% |
| 4iq0C02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.69 | 51.0 | 3.43e-01 | 100.0% | 18.8% |
| 1t70A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.68 | 53.0 | 3.30e-01 | 97.3% | 98.4% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.68 | 53.0 | 4.20e-01 | 100.0% | 40.2% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.68 | 57.0 | 4.19e-01 | 97.3% | 43.1% |
| 1vw4502 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 53.0 | 4.12e-01 | 100.0% | 38.0% |
| 1a6aB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.67 | 53.0 | 4.14e-01 | 100.0% | 39.3% |
| 4d8pB01 | 3.10.320.10 | Alpha Beta › Roll › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 › Class II Histocompatibility Antigen, M Beta Chain; Chain B, domain 1 | 0.66 | 52.0 | 3.92e-01 | 100.0% | 34.3% |
| 3ci0J02 | 2.10.70.20 | Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains | 0.66 | 55.0 | 5.08e-01 | 100.0% | 88.0% |
| 3moiA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 55.0 | 3.50e-01 | 100.0% | 18.0% |
| 8p2aA01 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.63 | 51.0 | 3.96e-01 | 100.0% | 40.2% |
| 1jcfA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 45.0 | 3.52e-01 | 100.0% | 32.6% |
| 6y79C01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.63 | 50.0 | 2.89e-01 | 100.0% | 9.1% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.62 | 53.0 | 3.82e-01 | 100.0% | 97.4% |
| 1rm6A03 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.62 | 52.0 | 3.62e-01 | 100.0% | 30.3% |
| 1huxA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 45.0 | 3.13e-01 | 97.3% | 21.4% |
| 1tm0A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.62 | 49.0 | 3.23e-01 | 100.0% | 20.1% |
| 3g0kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 53.0 | 3.64e-01 | 100.0% | 30.5% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 52.0 | 3.40e-01 | 100.0% | 23.3% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 51.0 | 3.68e-01 | 100.0% | 33.0% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 51.0 | 3.67e-01 | 97.3% | 34.9% |
| 4l3aA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 47.0 | 3.91e-01 | 100.0% | 47.5% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.60 | 52.0 | 3.51e-01 | 100.0% | 33.8% |
| 1a78A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 47.0 | 3.30e-01 | 100.0% | 26.9% |
| 4k3yC00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.58 | 47.0 | 2.76e-01 | 94.6% | 22.8% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.58 | 40.0 | 3.88e-01 | 75.7% | 59.1% |
| 3bxpB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 2.85e-01 | 97.3% | 27.1% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.57 | 45.0 | 4.18e-01 | 97.3% | 68.6% |
| 4emtA02 | 3.40.50.12100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein | 0.56 | 45.0 | 3.14e-01 | 97.3% | 25.4% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 43.0 | 3.06e-01 | 100.0% | 27.4% |
| 1lyvA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 47.0 | 2.84e-01 | 100.0% | 13.8% |
| 6ro0B02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 44.0 | 3.28e-01 | 97.3% | 63.6% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 3.10e-01 | 100.0% | 27.3% |
| 2iv2X01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.55 | 48.0 | 4.22e-01 | 100.0% | 67.3% |
| 8deeJ01 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 3.60e-01 | 100.0% | 70.2% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 44.0 | 3.04e-01 | 94.6% | 26.7% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 43.0 | 3.08e-01 | 100.0% | 27.4% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 48.0 | 3.97e-01 | 100.0% | 98.4% |
| 2au3A02 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.53 | 39.0 | 2.95e-01 | 100.0% | 79.5% |
| 2kw4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 41.0 | 2.89e-01 | 100.0% | 25.2% |
| 3df7A02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 42.0 | 2.96e-01 | 100.0% | 59.1% |
| 7t8tA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.03e-01 | 100.0% | 35.9% |
| 2hzpA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 2.70e-01 | 97.3% | 28.7% |
| 3eo5A01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.51 | 45.0 | 3.41e-01 | 100.0% | 68.2% |
| 6gmhI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 39.0 | 3.36e-01 | 97.3% | 49.3% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031781 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 1.00 | 94.0 | 5.76e-01 | 100.0% | 20.6% |
| 4034216 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.98 | 91.0 | 5.49e-01 | 100.0% | 19.0% |
| 3587075 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.97 | 89.0 | 5.57e-01 | 100.0% | 21.8% |
| 4432985 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.88 | 78.0 | 4.82e-01 | 100.0% | 19.5% |
| 5017856 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 77.0 | 4.54e-01 | 100.0% | 13.7% |
| 4954363 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.80 | 67.0 | 4.35e-01 | 100.0% | 21.2% |
| 4927878 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.79 | 66.0 | 4.62e-01 | 97.3% | 30.9% |
| 3240866 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.76 | 64.0 | 4.69e-01 | 100.0% | 36.0% |
| 4424281 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.75 | 62.0 | 4.30e-01 | 100.0% | 31.9% |
| 3930408 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.75 | 61.0 | 4.64e-01 | 97.3% | 41.2% |
| 3697317 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.74 | 64.0 | 4.71e-01 | 100.0% | 38.9% |
| 4302484 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.74 | 60.0 | 4.36e-01 | 100.0% | 37.4% |
| 3517332 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.74 | 59.0 | 4.34e-01 | 97.3% | 36.4% |
| 4096099 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.73 | 59.0 | 4.23e-01 | 100.0% | 35.8% |
| 4477564 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 62.0 | 4.93e-01 | 100.0% | 73.1% |
| 461696 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.72 | 61.0 | 3.99e-01 | 100.0% | 22.9% |
| 3944249 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.72 | 61.0 | 3.49e-01 | 100.0% | 9.9% |
| 4944011 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.72 | 59.0 | 4.47e-01 | 100.0% | 38.9% |
| 4243735 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.71 | 55.0 | 3.43e-01 | 100.0% | 14.8% |
| 3490893 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.70 | 56.0 | 3.93e-01 | 100.0% | 26.9% |
| 3390831 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.70 | 56.0 | 4.49e-01 | 100.0% | 43.8% |
| 4890537 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.69 | 54.0 | 4.83e-01 | 97.3% | 59.6% |
| 3550395 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.69 | 57.0 | 4.31e-01 | 100.0% | 38.9% |
| 3934407 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.69 | 56.0 | 3.93e-01 | 100.0% | 28.0% |
| 3649431 | 3523.1.1.0 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) | 0.69 | 60.0 | 4.49e-01 | 100.0% | 57.8% |
| 3271889 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.68 | 61.0 | 3.70e-01 | 100.0% | 17.8% |
| 3496171 | 330.1.1.10 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_MRPL44 | 0.68 | 57.0 | 4.32e-01 | 100.0% | 38.9% |
| 3934686 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 53.0 | 4.15e-01 | 100.0% | 37.9% |
| 3390600 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.68 | 61.0 | 4.78e-01 | 100.0% | 49.3% |
| 6742 | 244.4.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases, PF27537 | 0.68 | 53.0 | 5.31e-01 | 97.3% | 89.2% |
| 3473362 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.67 | 57.0 | 3.79e-01 | 100.0% | 24.1% |
| 2896582 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.67 | 57.0 | 4.03e-01 | 100.0% | 31.1% |
| 3704272 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.67 | 55.0 | 3.17e-01 | 91.9% | 10.1% |
| 3604091 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.67 | 55.0 | 4.51e-01 | 100.0% | 50.0% |
| 4945741 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.67 | 54.0 | 4.57e-01 | 100.0% | 53.8% |
| 4015869 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 55.0 | 4.14e-01 | 100.0% | 68.0% |
| None | — | 0.65 | 57.0 | 3.07e-01 | 100.0% | 5.8% | |
| 3218316 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.65 | 54.0 | 3.64e-01 | 100.0% | 54.2% |
| 4066189 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 55.0 | 4.22e-01 | 100.0% | 41.2% |
| 2575157 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.65 | 50.0 | 4.12e-01 | 100.0% | 45.2% |
| 3954941 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.65 | 52.0 | 4.00e-01 | 100.0% | 38.9% |
| 3432658 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 54.0 | 4.02e-01 | 100.0% | 36.8% |
| 3569462 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.65 | 56.0 | 3.80e-01 | 100.0% | 26.4% |
| 137821 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.64 | 52.0 | 3.98e-01 | 100.0% | 37.4% |
| 3617706 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 56.0 | 4.09e-01 | 100.0% | 37.0% |
| 4956532 | 2484.1.1.22 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 | 0.64 | 55.0 | 3.59e-01 | 100.0% | 20.6% |
| 3507047 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.64 | 52.0 | 3.86e-01 | 100.0% | 35.0% |
| 4203072 | 330.1.1.19 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 | 0.63 | 53.0 | 3.82e-01 | 100.0% | 33.3% |
| 4950045 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.63 | 54.0 | 4.15e-01 | 100.0% | 43.5% |
| 3492440 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 49.0 | 3.50e-01 | 100.0% | 27.2% |
| 4368803 | 2484.1.1.22 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF99 | 0.62 | 52.0 | 3.42e-01 | 100.0% | 20.6% |
| 4938125 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.62 | 53.0 | 4.09e-01 | 100.0% | 43.5% |
| 5038844 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.62 | 52.0 | 4.14e-01 | 100.0% | 46.3% |
| 2987895 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.61 | 46.0 | 4.69e-01 | 97.3% | 91.7% |
| 1826875 | 330.13.1.1 ↗ | a+b two layers › dsRBD-like › dGTP triphosphohydrolase inhibitor › dGTP triphosphohydrolase inhibitor › T7-like_gp12 | 0.61 | 50.0 | 3.92e-01 | 100.0% | 42.4% |
| 4102002 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.61 | 48.0 | 4.04e-01 | 100.0% | 50.0% |
| 4215844 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.61 | 52.0 | 3.30e-01 | 100.0% | 19.0% |
| 4972935 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 48.0 | 3.19e-01 | 100.0% | 21.7% |
| 3381551 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.59 | 46.0 | 3.65e-01 | 97.3% | 40.0% |
| 3622649 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.59 | 47.0 | 3.93e-01 | 100.0% | 50.0% |
| 3438132 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 50.0 | 3.71e-01 | 100.0% | 38.1% |
| 2330416 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.59 | 46.0 | 4.59e-01 | 100.0% | 89.7% |
| 3592743 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 46.0 | 3.69e-01 | 100.0% | 41.2% |
| 5043691 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.59 | 47.0 | 3.97e-01 | 100.0% | 50.7% |
| 4679590 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.59 | 46.0 | 3.44e-01 | 100.0% | 33.3% |
| 4505972 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 48.0 | 2.89e-01 | 100.0% | 11.6% |
| 4042086 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.58 | 47.0 | 3.69e-01 | 100.0% | 41.2% |
| 3429608 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.58 | 47.0 | 2.54e-01 | 100.0% | 4.6% |
| 4254198 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.58 | 46.0 | 3.85e-01 | 100.0% | 50.0% |
| 5029720 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.57 | 46.0 | 3.39e-01 | 100.0% | 34.0% |
| 4385576 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.57 | 46.0 | 3.63e-01 | 100.0% | 41.2% |
| 4533094 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 43.0 | 3.07e-01 | 100.0% | 24.6% |
| None | — | 0.57 | 40.0 | 2.41e-01 | 75.7% | 10.4% | |
| 3877924 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 48.0 | 3.73e-01 | 100.0% | 43.5% |
| 4988818 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.56 | 49.0 | 3.21e-01 | 100.0% | 23.1% |
| 4584323 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.56 | 47.0 | 4.04e-01 | 97.3% | 58.3% |
| 3983036 | 2484.1.1.119 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1 | 0.56 | 41.0 | 3.71e-01 | 100.0% | 55.4% |
| 4862964 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.55 | 42.0 | 2.78e-01 | 100.0% | 18.7% |
| 3983782 | 2484.1.1.119 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1 | 0.55 | 41.0 | 3.34e-01 | 100.0% | 38.3% |
| 3185281 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.55 | 46.0 | 3.19e-01 | 100.0% | 26.1% |
| 4086202 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.54 | 44.0 | 3.81e-01 | 100.0% | 80.0% |
| 4889631 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.53 | 43.0 | 3.25e-01 | 100.0% | 35.2% |
| 5034583 | 1001.1.1.0 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 | 0.53 | 40.0 | 3.74e-01 | 100.0% | 66.0% |
| 4945290 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 44.0 | 3.79e-01 | 100.0% | 66.7% |
| 4928393 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.51 | 46.0 | 2.77e-01 | 100.0% | 13.6% |