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MK448549.1__QBX11456.1__JavanS58_0001__00021
Bact-VirMK448549.1__QBX11456.1__JavanS58_0001__00021
Identity
- Accession:
- MK448549 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-114
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05016.22 best | ParE_toxin | 37.8 | 3.30e-09 | 93.4% | 97.8% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kxeA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.90 | 75.0 | 7.99e-01 | 99.1% | 97.9% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.87 | 64.0 | 7.01e-01 | 92.5% | 92.0% |
| 5cegD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.85 | 76.0 | 7.77e-01 | 95.3% | 97.0% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.84 | 66.0 | 7.13e-01 | 95.3% | 96.6% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.80 | 61.0 | 6.40e-01 | 96.2% | 87.4% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.80 | 62.0 | 6.74e-01 | 93.4% | 96.6% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.72 | 56.0 | 6.01e-01 | 93.4% | 94.4% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.62 | 47.0 | 4.99e-01 | 93.4% | 91.3% |
| 4a18P00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.60 | 33.0 | 4.00e-01 | 99.1% | 84.8% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 38.0 | 2.70e-01 | 72.6% | 42.1% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 42.0 | 2.84e-01 | 88.7% | 39.0% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 42.0 | 3.94e-01 | 88.7% | 86.0% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.52 | 47.0 | 4.07e-01 | 95.3% | 96.8% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.52 | 33.0 | 3.91e-01 | 95.3% | 95.8% |
| 1v61A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 43.0 | 3.99e-01 | 99.1% | 73.5% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 41.0 | 3.99e-01 | 90.6% | 76.7% |
| 1dbzA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.50 | 38.0 | 3.29e-01 | 84.0% | 71.7% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4968774 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 64.0 | 7.60e-01 | 89.6% | 100.0% |
| 4941220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 65.0 | 7.49e-01 | 92.5% | 96.2% |
| 4928181 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.92 | 69.0 | 7.69e-01 | 98.1% | 96.5% |
| 4463632 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.91 | 73.0 | 7.97e-01 | 92.5% | 97.8% |
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.91 | 64.0 | 7.40e-01 | 90.6% | 96.2% |
| 5063859 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.90 | 64.0 | 7.34e-01 | 90.6% | 96.2% |
| 4887373 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.90 | 63.0 | 7.34e-01 | 89.6% | 97.5% |
| 4966674 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 68.0 | 7.56e-01 | 98.1% | 97.6% |
| 4999510 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 67.0 | 7.49e-01 | 95.3% | 96.5% |
| 5052823 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 75.0 | 7.89e-01 | 98.1% | 97.9% |
| 4544637 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 73.0 | 7.77e-01 | 97.2% | 96.8% |
| 5014619 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 63.0 | 7.17e-01 | 92.5% | 96.2% |
| 4984297 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 66.0 | 7.14e-01 | 93.4% | 91.1% |
| 5080427 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 62.0 | 7.13e-01 | 92.5% | 96.2% |
| 5029836 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.87 | 62.0 | 7.12e-01 | 97.2% | 97.5% |
| 5014147 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.87 | 64.0 | 7.33e-01 | 93.4% | 100.0% |
| 5005256 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 65.0 | 7.24e-01 | 94.3% | 97.6% |
| 5018720 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 65.0 | 7.19e-01 | 94.3% | 97.6% |
| 5029202 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.86 | 63.0 | 7.04e-01 | 98.1% | 95.3% |
| 4968316 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 63.0 | 6.95e-01 | 92.5% | 92.0% |
| 4969644 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 68.0 | 7.36e-01 | 92.5% | 96.7% |
| 4967722 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 62.0 | 7.06e-01 | 96.2% | 100.0% |
| 4962176 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 61.0 | 7.01e-01 | 90.6% | 98.8% |
| 5078519 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 71.0 | 7.55e-01 | 97.2% | 97.9% |
| 3955980 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 72.0 | 7.26e-01 | 100.0% | 90.5% |
| 138730 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 66.0 | 7.13e-01 | 95.3% | 96.6% |
| 4933908 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 62.0 | 6.91e-01 | 92.5% | 95.3% |
| 4966983 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.83 | 59.0 | 6.80e-01 | 89.6% | 97.5% |
| 5027871 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.81 | 66.0 | 7.03e-01 | 97.2% | 96.8% |
| 3972934 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 76.0 | 7.65e-01 | 99.1% | 100.0% |
| 5007064 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.81 | 55.0 | 6.41e-01 | 90.6% | 97.3% |
| 3602698 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 60.0 | 6.69e-01 | 93.4% | 96.5% |
| 134040 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.80 | 61.0 | 6.40e-01 | 96.2% | 87.4% |
| 5007067 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 63.0 | 6.87e-01 | 93.4% | 97.8% |
| 3395219 | 4312.2.1.1 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like › TrmO_C | 0.78 | 51.0 | 6.01e-01 | 88.7% | 93.3% |
| 4363733 | 4312.1.1.13 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Toxin_YhaV | 0.76 | 70.0 | 6.29e-01 | 100.0% | 84.8% |
| 4993636 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.75 | 48.0 | 5.83e-01 | 89.6% | 98.6% |
| 4927100 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 58.0 | 6.22e-01 | 91.5% | 96.7% |
| 4959385 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 49.0 | 5.78e-01 | 90.6% | 97.3% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.72 | 56.0 | 6.01e-01 | 93.4% | 94.4% |
| 5082625 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.68 | 55.0 | 5.87e-01 | 96.2% | 100.0% |
| 2706250 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.67 | 59.0 | 5.95e-01 | 100.0% | 95.2% |
| 4616795 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.66 | 58.0 | 5.96e-01 | 100.0% | 100.0% |
| 3450557 | 5.1.3.159 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF7595 | 0.66 | 41.0 | 2.89e-01 | 99.1% | 21.0% |
| 3944258 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.66 | 54.0 | 5.53e-01 | 91.5% | 92.0% |
| 5062732 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.66 | 45.0 | 4.96e-01 | 93.4% | 88.2% |
| 3739833 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 29.0 | 2.93e-01 | 93.4% | 41.8% |
| 3248547 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 42.0 | 3.03e-01 | 100.0% | 26.3% |
| 3273324 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.58 | 43.0 | 2.80e-01 | 77.4% | 27.1% |
| 3446490 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.53 | 38.0 | 2.62e-01 | 100.0% | 20.8% |
| 1318715 | 243.16.1.1 ↗ | a+b two layers › Cystatin-like › hypothetical protein CLOLEP_02462 › hypothetical protein CLOLEP_02462 › DUF6836 | 0.51 | 41.0 | 4.02e-01 | 90.6% | 79.8% |
| 3775274 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.51 | 40.0 | 2.72e-01 | 84.9% | 36.3% |
| 3485547 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 46.0 | 3.90e-01 | 100.0% | 69.4% |