←Back to structures

MK448577.1__QBX11889.1__JavanS614_0014__00014

Bact-Vir

MK448577.1__QBX11889.1__JavanS614_0014__00014

Identity

Accession:
MK448577 ↗
Kingdom:
phage

Quality

71.0 mean pLDDT

Taxonomy

Streptococcus_satellite_phage_Javan614

TaxID: 2558784

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-135
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF17528.8 best HdcB 34.3 2.90e-08 87.2% 52.9%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 52.0 5.92e-01 94.0% 100.0%
3f5rA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 55.0 5.92e-01 97.0% 98.2%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 48.0 5.30e-01 88.0% 100.0%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 4.43e-01 88.7% 85.6%
4i8iA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 36.0 2.99e-01 71.4% 54.1%
1reoA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 36.0 3.53e-01 91.7% 66.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3829886 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.73 42.0 5.45e-01 80.5% 98.7%
4945655 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 48.0 5.48e-01 70.7% 96.0%
3743110 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.66 50.0 5.63e-01 91.7% 100.0%
5014255 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.66 53.0 5.36e-01 88.7% 83.7%
3349450 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.65 53.0 5.57e-01 92.5% 93.3%
3970639 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 51.0 5.60e-01 88.0% 100.0%
5022727 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 49.0 4.71e-01 83.5% 69.3%
3277005 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.64 52.0 5.12e-01 89.5% 80.7%
3579987 220.1.1.160 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MADD 0.64 49.0 5.35e-01 86.5% 97.3%
3593931 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 56.0 5.25e-01 95.5% 83.7%
3705577 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.62 55.0 5.29e-01 94.7% 86.7%
3743890 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 52.0 5.05e-01 91.0% 81.4%
3782222 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 50.0 4.78e-01 88.0% 74.2%
4023268 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 55.0 5.21e-01 97.0% 85.8%
3466459 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.60 54.0 5.32e-01 95.5% 93.6%
3516743 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.59 54.0 4.93e-01 97.0% 77.1%
5016314 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.59 51.0 4.96e-01 94.0% 91.3%
3482713 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 51.0 5.08e-01 93.2% 90.4%
4024877 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 46.0 4.51e-01 85.7% 86.9%
4539117 220.1.1.19 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle 0.56 52.0 4.98e-01 99.2% 97.3%
4522783 101.1.2.715 ↗ alpha arrays › HTH › HTH › winged helix domain › CheF-arch 0.56 52.0 4.00e-01 99.2% 75.0%
3586827 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.55 29.0 3.18e-01 80.5% 59.1%
3214781 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 42.0 3.24e-01 83.5% 57.2%
3231960 192.5.1.0 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.53 47.0 4.00e-01 93.2% 81.5%