←Back to structures
MK448625.1__QBX12779.1__JavanS738_0005__00005
Bact-VirMK448625.1__QBX12779.1__JavanS738_0005__00005
Identity
- Accession:
- MK448625 ↗
- Kingdom:
- phage
Quality
75.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-57
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13783.12 best | DUF4177 | 26.6 | 7.90e-06 | 100.0% | 64.1% |
CATH (61)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mp8A01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.77 | 37.0 | 2.48e-01 | 100.0% | 13.0% |
| 1j3mA00 | 3.30.310.70 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain | 0.76 | 69.0 | 4.96e-01 | 100.0% | 37.8% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.73 | 61.0 | 5.18e-01 | 100.0% | 60.0% |
| 7f4oA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.73 | 63.0 | 4.18e-01 | 100.0% | 26.5% |
| 3bh7B02 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.72 | 62.0 | 4.64e-01 | 100.0% | 49.6% |
| 3u6yA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.71 | 62.0 | 4.89e-01 | 100.0% | 56.6% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.71 | 59.0 | 4.71e-01 | 100.0% | 45.5% |
| 5xyiU00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.69 | 58.0 | 4.69e-01 | 97.9% | 62.9% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.68 | 59.0 | 4.75e-01 | 100.0% | 53.2% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 51.0 | 4.26e-01 | 100.0% | 47.1% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.67 | 49.0 | 4.16e-01 | 80.9% | 58.0% |
| 4pt4B00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.67 | 41.0 | 3.17e-01 | 97.9% | 29.9% |
| 4w78G00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.67 | 57.0 | 3.97e-01 | 100.0% | 91.4% |
| 4n1vA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.66 | 40.0 | 3.19e-01 | 97.9% | 31.2% |
| 4v19W00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.66 | 57.0 | 3.96e-01 | 100.0% | 41.6% |
| 2d73A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.65 | 44.0 | 2.71e-01 | 70.2% | 12.0% |
| 2ndpA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.65 | 40.0 | 3.09e-01 | 97.9% | 29.3% |
| 5v7qT00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 55.0 | 4.40e-01 | 100.0% | 83.7% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.65 | 54.0 | 4.11e-01 | 100.0% | 44.7% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.64 | 54.0 | 3.93e-01 | 100.0% | 47.2% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 49.0 | 4.18e-01 | 100.0% | 48.3% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 48.0 | 4.26e-01 | 100.0% | 54.5% |
| 8a9xA01 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.63 | 53.0 | 4.49e-01 | 97.9% | 57.3% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 51.0 | 4.34e-01 | 97.9% | 55.2% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 47.0 | 4.02e-01 | 100.0% | 47.8% |
| 3iwcB00 | 3.30.360.110 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › S-adenosylmethionine decarboxylase domain | 0.62 | 49.0 | 4.52e-01 | 100.0% | 67.2% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.61 | 48.0 | 3.73e-01 | 89.4% | 40.9% |
| 1vwxP00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.61 | 50.0 | 3.64e-01 | 100.0% | 41.8% |
| 7jrjK01 | 3.30.70.141 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleoside diphosphate kinase-like domain | 0.61 | 52.0 | 3.70e-01 | 100.0% | 42.3% |
| 3sm3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 53.0 | 3.43e-01 | 100.0% | 39.6% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.59 | 47.0 | 3.59e-01 | 97.9% | 38.8% |
| 2mdaA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 47.0 | 3.87e-01 | 100.0% | 46.3% |
| 2p8jA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 46.0 | 3.18e-01 | 100.0% | 35.4% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 46.0 | 3.53e-01 | 97.9% | 39.4% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.57 | 41.0 | 3.78e-01 | 80.9% | 63.6% |
| 2d7vB00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 45.0 | 3.34e-01 | 97.9% | 34.6% |
| 6mroA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 45.0 | 3.16e-01 | 97.9% | 27.8% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.63e-01 | 100.0% | 44.1% |
| 1lqlA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 44.0 | 3.65e-01 | 97.9% | 53.4% |
| 1nyeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 44.0 | 3.37e-01 | 97.9% | 35.7% |
| 3wa7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 41.0 | 2.40e-01 | 80.9% | 57.8% |
| 1owfA00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.56 | 39.0 | 3.22e-01 | 76.6% | 81.2% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.12e-01 | 100.0% | 23.7% |
| 1hnnA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 48.0 | 3.07e-01 | 100.0% | 24.1% |
| 8f4rA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.55 | 48.0 | 3.84e-01 | 100.0% | 49.0% |
| 1b3tA00 | 3.30.70.390 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Epstein Barr virus nuclear antigen-1, DNA-binding domain | 0.55 | 44.0 | 3.30e-01 | 100.0% | 38.1% |
| 1yb3A00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 44.0 | 3.19e-01 | 100.0% | 32.1% |
| 3ggdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 42.0 | 2.84e-01 | 100.0% | 97.9% |
| 5awwY00 | 1.10.3370.10 | Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain | 0.54 | 43.0 | 2.53e-01 | 91.5% | 42.7% |
| 1kutA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 41.0 | 3.24e-01 | 97.9% | 37.6% |
| 4jxqA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 47.0 | 3.15e-01 | 100.0% | 44.0% |
| 3g8wB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 3.13e-01 | 95.7% | 39.6% |
| 1f8vC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 42.0 | 2.69e-01 | 100.0% | 69.1% |
| 3hhsB03 | 2.60.40.1520 | Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain | 0.52 | 40.0 | 2.74e-01 | 100.0% | 64.9% |
| 4pibA00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.52 | 42.0 | 2.97e-01 | 100.0% | 84.5% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.52 | 40.0 | 3.43e-01 | 100.0% | 48.4% |
| 1nbuA00 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.51 | 41.0 | 3.15e-01 | 91.5% | 37.3% |
| 1ib6A02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 40.0 | 2.79e-01 | 87.2% | 81.3% |
| 3dr6B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 44.0 | 3.03e-01 | 100.0% | 43.2% |
| 4wksC02 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.50 | 36.0 | 3.24e-01 | 78.7% | 62.7% |
| 7oocE01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.50 | 39.0 | 3.46e-01 | 100.0% | 58.8% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3200737 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.79 | 67.0 | 4.27e-01 | 100.0% | 20.8% |
| 3697211 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.78 | 70.0 | 4.37e-01 | 100.0% | 20.0% |
| 3685597 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.77 | 66.0 | 4.23e-01 | 100.0% | 22.4% |
| 3200348 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.75 | 59.0 | 3.77e-01 | 89.4% | 18.6% |
| 3790670 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.74 | 60.0 | 4.38e-01 | 100.0% | 40.0% |
| 3903912 | 304.8.1.15 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TH_ACT | 0.72 | 58.0 | 4.49e-01 | 100.0% | 39.1% |
| 3800972 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.72 | 57.0 | 5.67e-01 | 100.0% | 84.0% |
| 1562398 | 3976.1.1.1 ↗ | a+b duplicates or obligate multimers › GnsA › GnsA › GnsA › GnsAB_toxin | 0.72 | 59.0 | 5.56e-01 | 100.0% | 76.7% |
| 4943908 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.70 | 60.0 | 3.97e-01 | 97.9% | 26.0% |
| 4991161 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.70 | 60.0 | 4.64e-01 | 97.9% | 90.5% |
| 4965975 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.69 | 57.0 | 4.06e-01 | 100.0% | 30.6% |
| 3970088 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 53.0 | 4.39e-01 | 100.0% | 45.3% |
| 5040360 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 56.0 | 4.55e-01 | 95.7% | 55.8% |
| 4965288 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.68 | 57.0 | 3.83e-01 | 97.9% | 25.1% |
| 3952856 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.68 | 53.0 | 4.28e-01 | 100.0% | 43.0% |
| 5022567 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.67 | 56.0 | 3.96e-01 | 100.0% | 30.0% |
| 4010833 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 52.0 | 4.24e-01 | 100.0% | 43.0% |
| 3626667 | 5.1.4.45 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_3 | 0.67 | 55.0 | 3.25e-01 | 93.6% | 21.1% |
| 3196348 | 328.8.1.0 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 | 0.66 | 56.0 | 4.15e-01 | 100.0% | 47.7% |
| 5012842 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 56.0 | 4.65e-01 | 97.9% | 65.9% |
| 4995034 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.66 | 54.0 | 3.70e-01 | 100.0% | 38.0% |
| 4978550 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.66 | 56.0 | 3.88e-01 | 100.0% | 81.2% |
| 4240651 | 101.17.1.1 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding | 0.66 | 41.0 | 3.18e-01 | 100.0% | 30.0% |
| 4993109 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.66 | 57.0 | 4.71e-01 | 100.0% | 56.5% |
| 4228321 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.65 | 53.0 | 4.34e-01 | 100.0% | 47.4% |
| 4950495 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 51.0 | 4.41e-01 | 100.0% | 53.8% |
| 4997598 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.65 | 54.0 | 4.23e-01 | 100.0% | 43.5% |
| 4000519 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 54.0 | 4.44e-01 | 100.0% | 51.6% |
| 4982996 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.65 | 57.0 | 3.99e-01 | 100.0% | 44.7% |
| 4928077 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.64 | 50.0 | 3.24e-01 | 100.0% | 16.7% |
| 3405003 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.64 | 52.0 | 3.54e-01 | 97.9% | 24.4% |
| 5030848 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.64 | 54.0 | 3.92e-01 | 100.0% | 37.9% |
| 3387871 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.63 | 51.0 | 3.93e-01 | 100.0% | 38.3% |
| 4832855 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.63 | 54.0 | 4.55e-01 | 100.0% | 79.8% |
| 3601299 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.63 | 54.0 | 4.01e-01 | 97.9% | 55.2% |
| 3603683 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.63 | 53.0 | 3.89e-01 | 100.0% | 37.9% |
| 5000641 | 2003.1.5.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 | 0.63 | 54.0 | 3.35e-01 | 97.9% | 16.7% |
| 1130316 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 47.0 | 4.02e-01 | 100.0% | 47.3% |
| 5055787 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.62 | 52.0 | 4.34e-01 | 100.0% | 53.3% |
| 3744913 | 304.8.1.15 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › TH_ACT | 0.62 | 51.0 | 4.16e-01 | 100.0% | 47.4% |
| 4562028 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 49.0 | 3.65e-01 | 97.9% | 31.7% |
| 3199096 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.61 | 42.0 | 2.74e-01 | 76.6% | 16.9% |
| 3516145 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 47.0 | 4.17e-01 | 95.7% | 55.0% |
| 1214396 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.61 | 49.0 | 4.08e-01 | 97.9% | 50.6% |
| 3952172 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.60 | 47.0 | 3.30e-01 | 97.9% | 25.3% |
| 5879 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.59 | 47.0 | 3.55e-01 | 97.9% | 37.4% |
| 4138614 | 4329.1.1.0 ↗ | a+b complex topology › ORC1-binding domain › ORC1-binding domain › ORC1-binding domain | 0.59 | 45.0 | 3.07e-01 | 89.4% | 25.0% |
| 4145584 | 3016.1.1.11 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA | 0.59 | 51.0 | 3.98e-01 | 100.0% | 47.6% |
| 2589713 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.58 | 50.0 | 3.74e-01 | 100.0% | 57.6% |
| 3998929 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 43.0 | 3.08e-01 | 85.1% | 28.5% |
| 4972329 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.58 | 48.0 | 3.70e-01 | 100.0% | 47.2% |
| 2907089 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.58 | 49.0 | 3.81e-01 | 100.0% | 69.6% |
| 3715696 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.58 | 42.0 | 2.70e-01 | 93.6% | 13.9% |
| 3357183 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 40.0 | 2.89e-01 | 78.7% | 25.6% |
| 3274216 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.57 | 44.0 | 3.41e-01 | 97.9% | 34.1% |
| 3214850 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 41.0 | 2.46e-01 | 76.6% | 13.7% |
| 3711966 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.56 | 45.0 | 4.33e-01 | 93.6% | 90.9% |
| 3187312 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 43.0 | 2.60e-01 | 100.0% | 17.4% |
| 3842152 | 605.1.1.195 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › CaKB | 0.55 | 39.0 | 3.07e-01 | 80.9% | 44.8% |
| 3478414 | 304.49.1.0 ↗ | a+b two layers › Alpha-beta plaits › TRADD, N-terminal domain/Dystroglycan, domain 2 › TRADD, N-terminal domain/Dystroglycan, domain 2 | 0.54 | 48.0 | 3.45e-01 | 100.0% | 40.6% |
| 3905418 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 43.0 | 3.30e-01 | 97.9% | 47.7% |
| 3484885 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.54 | 48.0 | 3.40e-01 | 100.0% | 38.6% |
| 3384692 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.53 | 42.0 | 3.54e-01 | 100.0% | 51.0% |
| 3499652 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 42.0 | 2.71e-01 | 95.7% | 55.4% |
| 2757968 | 304.48.1.12 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Mononeg_RNA_pol | 0.53 | 46.0 | 2.90e-01 | 95.7% | 28.4% |
| 3680657 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.53 | 43.0 | 2.59e-01 | 93.6% | 41.0% |
| 4878600 | 327.13.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C | 0.53 | 41.0 | 3.13e-01 | 95.7% | 68.3% |
| 3198254 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.52 | 41.0 | 3.65e-01 | 100.0% | 60.0% |
| 4945477 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 44.0 | 2.69e-01 | 100.0% | 33.5% |
| 4928518 | 304.51.1.1 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C | 0.50 | 40.0 | 2.79e-01 | 100.0% | 39.0% |