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MK448626.1__QBX12813.1__JavanS739_0016__00016
Bact-VirMK448626.1__QBX12813.1__JavanS739_0016__00016
Identity
- Accession:
- MK448626 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-64
Domain cluster:
rep: MK448433.1__QBX09257.1__JavanS328_0013__00013__D1-48
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10055.15 best | DUF2292 | 23.1 | 6.30e-05 | 49.2% | 54.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.58 | 45.0 | 4.12e-01 | 85.2% | 93.9% |
| 4cj0A02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 41.0 | 2.53e-01 | 86.9% | 33.5% |
| 1z4vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 46.0 | 2.80e-01 | 100.0% | 40.5% |
| 5yhgA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 44.0 | 2.91e-01 | 100.0% | 90.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3791017 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.59 | 42.0 | 2.60e-01 | 75.4% | 53.3% |
| 5000245 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.57 | 43.0 | 2.55e-01 | 83.6% | 71.6% |
| 3923062 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.54 | 45.0 | 2.83e-01 | 98.4% | 77.9% |
| 4284036 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.52 | 37.0 | 3.16e-01 | 77.0% | 68.6% |