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MK448652.1__QBX13380.1__JavanS763_0003__00003
Bact-VirMK448652.1__QBX13380.1__JavanS763_0003__00003
Identity
- Accession:
- MK448652 ↗
- Kingdom:
- phage
Quality
96.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-101
Domain cluster:
rep: N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00079__D49-143
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.90 | 79.0 | 5.81e-01 | 91.1% | 40.6% |
| 3cucA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.86 | 81.0 | 5.80e-01 | 100.0% | 40.1% |
| 4x2cA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.84 | 77.0 | 5.92e-01 | 97.0% | 65.7% |
| 7xuxB01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.84 | 73.0 | 5.32e-01 | 99.0% | 38.0% |
| 1mijA00 | 1.10.10.500 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeo-prospero domain | 0.63 | 40.0 | 3.64e-01 | 90.1% | 46.8% |
| 3mnlB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 47.0 | 3.87e-01 | 90.1% | 45.6% |
| 2h56A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.59 | 47.0 | 4.54e-01 | 87.1% | 87.7% |
| 7sf8A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 43.0 | 3.25e-01 | 77.2% | 35.3% |
| 7eq1R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 42.0 | 3.06e-01 | 77.2% | 30.7% |
| 6q3wB02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.57 | 44.0 | 3.76e-01 | 83.2% | 83.1% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.56 | 38.0 | 3.55e-01 | 93.1% | 54.1% |
| 1kplA00 | 1.10.3080.10 | Mainly Alpha › Orthogonal Bundle › Clc chloride channel › Clc chloride channel | 0.56 | 46.0 | 3.04e-01 | 91.1% | 25.1% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.55 | 42.0 | 3.72e-01 | 82.2% | 61.3% |
| 4okmD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.55 | 47.0 | 3.38e-01 | 95.0% | 89.6% |
| 4akvA02 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.54 | 45.0 | 3.70e-01 | 91.1% | 88.4% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 39.0 | 4.02e-01 | 93.1% | 81.2% |
| 1g4uS01 | 1.20.120.260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain | 0.53 | 36.0 | 3.39e-01 | 70.3% | 99.2% |
| 2ijqA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.53 | 37.0 | 3.34e-01 | 73.3% | 75.9% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 37.0 | 3.33e-01 | 97.0% | 51.4% |
| 5tgzA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 46.0 | 3.35e-01 | 100.0% | 55.8% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 36.0 | 3.61e-01 | 92.1% | 70.9% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.50 | 45.0 | 4.22e-01 | 100.0% | 94.3% |
| 1siqA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 40.0 | 3.45e-01 | 84.2% | 76.1% |
| 1r2jA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.50 | 39.0 | 3.47e-01 | 82.2% | 75.0% |
| 1irxA04 | 1.10.10.770 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 37.0 | 3.63e-01 | 94.1% | 72.2% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.50 | 41.0 | 3.80e-01 | 89.1% | 89.8% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5079924 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.92 | 88.0 | 6.34e-01 | 100.0% | 43.2% |
| 5032503 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.92 | 88.0 | 6.32e-01 | 100.0% | 41.6% |
| 5080803 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.92 | 86.0 | 6.10e-01 | 100.0% | 38.4% |
| 3963324 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.90 | 86.0 | 6.12e-01 | 100.0% | 40.4% |
| 4968720 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.89 | 84.0 | 5.94e-01 | 99.0% | 40.0% |
| 4643006 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.89 | 84.0 | 5.88e-01 | 100.0% | 37.9% |
| 3931514 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 84.0 | 6.02e-01 | 100.0% | 42.0% |
| 3509340 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 84.0 | 5.97e-01 | 100.0% | 41.1% |
| 5029915 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 83.0 | 6.07e-01 | 100.0% | 45.4% |
| 1405598 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 78.0 | 5.65e-01 | 99.0% | 37.7% |
| 340900 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.87 | 82.0 | 5.82e-01 | 100.0% | 39.6% |
| 3965496 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 78.0 | 5.92e-01 | 100.0% | 44.5% |
| 3591017 | 4040.1.1.0 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like | 0.85 | 76.0 | 5.65e-01 | 100.0% | 41.2% |
| 4962219 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 78.0 | 5.50e-01 | 99.0% | 37.2% |
| 4968988 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.84 | 79.0 | 5.58e-01 | 99.0% | 38.5% |
| 3282778 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.83 | 77.0 | 5.53e-01 | 99.0% | 40.4% |
| 5061707 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.78 | 71.0 | 5.14e-01 | 100.0% | 38.9% |
| 3723667 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 39.0 | 3.09e-01 | 82.2% | 29.5% |
| 3283105 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.61 | 51.0 | 4.67e-01 | 91.1% | 68.1% |
| 3397362 | 3615.1.1.29 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › DUF7775 | 0.55 | 37.0 | 3.35e-01 | 82.2% | 49.3% |
| 4995018 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.54 | 46.0 | 3.94e-01 | 96.0% | 97.6% |
| 3934651 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 45.0 | 3.32e-01 | 93.1% | 46.2% |
| 3487185 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.53 | 44.0 | 3.69e-01 | 90.1% | 80.0% |
| 3941722 | 5059.1.1.18 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UPF0060 | 0.53 | 36.0 | 3.57e-01 | 70.3% | 94.5% |
| 4984136 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.53 | 43.0 | 2.90e-01 | 95.0% | 92.9% |
| 5045257 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.53 | 45.0 | 3.69e-01 | 97.0% | 58.0% |
| 3719109 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.52 | 39.0 | 3.30e-01 | 82.2% | 93.7% |
| 3463254 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.51 | 39.0 | 3.51e-01 | 80.2% | 85.7% |
| 3901205 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.51 | 39.0 | 3.73e-01 | 95.0% | 71.3% |
| 1088878 | 633.30.1.1 ↗ | alpha bundles › Bromodomain-like › hypothetical protein ABAYE3784 › hypothetical protein ABAYE3784 › DUF4844 | 0.50 | 45.0 | 4.22e-01 | 100.0% | 94.3% |
| 3909550 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.50 | 39.0 | 3.50e-01 | 89.1% | 57.9% |
D2
medium
residues 102-222
Domain cluster:
rep: SR-VP_4-6_scaffold_141_3489769_prodigal-single.1__X__X__00301__D94-205
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02661.24 best | Fic | 55.3 | 1.40e-14 | 59.5% | 66.7% |
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cucA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.88 | 84.0 | 6.31e-01 | 100.0% | 52.7% |
| 4x2cA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.87 | 74.0 | 5.98e-01 | 90.9% | 51.2% |
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.86 | 81.0 | 6.40e-01 | 100.0% | 52.4% |
| 3shgA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.86 | 79.0 | 6.56e-01 | 98.3% | 59.1% |
| 2f6sA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.86 | 73.0 | 6.27e-01 | 100.0% | 60.0% |
| 5jffA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.84 | 78.0 | 6.57e-01 | 98.3% | 62.8% |
| 7xuxB01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.84 | 79.0 | 6.11e-01 | 100.0% | 53.3% |
| 2vy3A01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.80 | 73.0 | 5.75e-01 | 96.7% | 53.6% |
| 1nh1A01 | 1.10.3290.20 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › | 0.79 | 64.0 | 5.34e-01 | 90.9% | 52.0% |
| 3n3uA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.77 | 68.0 | 5.02e-01 | 96.7% | 38.8% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.65 | 54.0 | 5.11e-01 | 89.3% | 100.0% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 48.0 | 4.62e-01 | 81.8% | 93.0% |
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 49.0 | 4.64e-01 | 84.3% | 92.5% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.61 | 36.0 | 3.38e-01 | 77.7% | 46.3% |
| 4mo7A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 49.0 | 4.66e-01 | 84.3% | 95.8% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.61 | 40.0 | 3.73e-01 | 86.8% | 53.4% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 40.0 | 4.58e-01 | 86.8% | 94.3% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 39.0 | 4.26e-01 | 86.8% | 81.0% |
| 2genA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 48.0 | 4.18e-01 | 87.6% | 95.7% |
| 3eupB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 49.0 | 4.25e-01 | 93.4% | 88.5% |
| 3himA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 50.0 | 4.31e-01 | 92.6% | 91.1% |
| 1zzpA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.58 | 40.0 | 4.21e-01 | 90.1% | 78.0% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.58 | 39.0 | 3.63e-01 | 86.8% | 54.3% |
| 3c1yA02 | 1.20.1260.110 | Mainly Alpha › Up-down Bundle › Ferritin › DNA integrity scanning linker region | 0.56 | 46.0 | 4.31e-01 | 88.4% | 94.6% |
| 1l8qA03 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.56 | 36.0 | 3.82e-01 | 70.2% | 72.0% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 40.0 | 3.37e-01 | 73.6% | 73.3% |
| 7y3eA01 | 1.20.1530.20 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › | 0.56 | 44.0 | 3.08e-01 | 84.3% | 99.0% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.55 | 38.0 | 4.10e-01 | 87.6% | 81.1% |
| 7fhyB01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.55 | 43.0 | 3.28e-01 | 81.8% | 82.8% |
| 6y4rA01 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.54 | 41.0 | 3.78e-01 | 79.3% | 84.6% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.53 | 42.0 | 3.91e-01 | 85.1% | 94.9% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 43.0 | 4.32e-01 | 88.4% | 96.1% |
| 2cwyA00 | 1.10.3450.10 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like | 0.52 | 33.0 | 3.76e-01 | 73.6% | 83.9% |
| 2mabA00 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.51 | 39.0 | 4.10e-01 | 78.5% | 92.7% |
| 7cj3A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 44.0 | 3.40e-01 | 91.7% | 63.2% |
| 6k6iA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 43.0 | 3.53e-01 | 90.9% | 72.1% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.51 | 39.0 | 3.64e-01 | 89.3% | 63.6% |
| 2yveB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 42.0 | 3.80e-01 | 90.9% | 91.3% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.51 | 41.0 | 4.09e-01 | 85.1% | 95.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4993696 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.90 | 83.0 | 6.40e-01 | 98.3% | 48.3% |
| 5079924 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.89 | 86.0 | 6.51e-01 | 100.0% | 48.8% |
| 5032503 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.89 | 86.0 | 6.49e-01 | 100.0% | 48.4% |
| 340900 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.88 | 84.0 | 6.27e-01 | 100.0% | 52.2% |
| 4271275 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.87 | 76.0 | 6.47e-01 | 90.1% | 62.2% |
| 4643006 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.87 | 82.0 | 6.03e-01 | 100.0% | 42.1% |
| 5030057 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.87 | 81.0 | 6.18e-01 | 97.5% | 49.6% |
| 3931514 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 81.0 | 6.16e-01 | 100.0% | 47.1% |
| 3509340 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 77.0 | 5.80e-01 | 100.0% | 43.3% |
| 57620 | 4040.1.1.0 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like | 0.86 | 73.0 | 6.34e-01 | 100.0% | 61.4% |
| 5027781 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 81.0 | 6.20e-01 | 99.2% | 49.0% |
| 2443906 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 74.0 | 6.05e-01 | 100.0% | 53.4% |
| 5080803 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 81.0 | 6.12e-01 | 99.2% | 49.4% |
| 4940660 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 78.0 | 6.06e-01 | 95.9% | 50.2% |
| 3801665 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 69.0 | 7.24e-01 | 84.3% | 93.6% |
| 5029915 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 75.0 | 5.81e-01 | 92.6% | 46.7% |
| 5027622 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 76.0 | 5.87e-01 | 94.2% | 46.5% |
| 4980541 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 80.0 | 6.05e-01 | 100.0% | 47.3% |
| 5058643 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.84 | 80.0 | 6.24e-01 | 100.0% | 51.9% |
| 5061707 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.84 | 77.0 | 5.73e-01 | 96.7% | 43.0% |
| 5016571 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.83 | 79.0 | 5.81e-01 | 100.0% | 48.4% |
| 3987840 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 72.0 | 5.59e-01 | 93.4% | 50.4% |
| 4119078 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 77.0 | 5.74e-01 | 100.0% | 57.8% |
| 5053257 | 601.28.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 | 0.69 | 38.0 | 4.22e-01 | 81.0% | 67.4% |
| 5011592 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.69 | 55.0 | 4.45e-01 | 85.1% | 83.9% |
| 5074120 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.66 | 37.0 | 4.16e-01 | 84.3% | 69.5% |
| 3287071 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.65 | 47.0 | 4.26e-01 | 75.2% | 95.0% |
| 3715787 | 603.1.1.98 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 | 0.64 | 46.0 | 3.75e-01 | 75.2% | 86.5% |
| 3345179 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.63 | 41.0 | 3.84e-01 | 86.8% | 53.3% |
| 3830008 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.63 | 41.0 | 3.87e-01 | 86.8% | 54.4% |
| 3947762 | 191.1.1.29 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_27 | 0.62 | 50.0 | 4.67e-01 | 86.0% | 94.6% |
| 4975294 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.62 | 32.0 | 3.62e-01 | 78.5% | 64.4% |
| 3419733 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 46.0 | 3.99e-01 | 81.0% | 84.6% |
| 4051624 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.61 | 41.0 | 4.34e-01 | 77.7% | 78.1% |
| 3819922 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.60 | 41.0 | 3.83e-01 | 87.6% | 57.2% |
| 3966206 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.60 | 48.0 | 4.61e-01 | 86.8% | 98.6% |
| 5074606 | 601.28.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like | 0.60 | 35.0 | 3.77e-01 | 92.6% | 67.0% |
| 3615531 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 3.34e-01 | 94.2% | 30.7% |
| 3781941 | 109.4.1.43 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP | 0.59 | 45.0 | 3.81e-01 | 81.0% | 85.1% |
| 4383079 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.59 | 39.0 | 3.58e-01 | 84.3% | 52.3% |
| 3815191 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.57 | 41.0 | 3.75e-01 | 87.6% | 56.3% |
| 3647455 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.57 | 41.0 | 3.74e-01 | 90.1% | 54.5% |
| 5010916 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.57 | 45.0 | 4.36e-01 | 86.0% | 100.0% |
| 3424914 | 109.4.1.583 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DNA_pol_phi | 0.55 | 46.0 | 3.45e-01 | 94.2% | 77.3% |
| 3693818 | 109.4.1.146 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_load | 0.54 | 42.0 | 2.64e-01 | 81.8% | 46.8% |
| 3704187 | 601.28.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › VPS28 | 0.54 | 35.0 | 3.67e-01 | 86.0% | 71.8% |
| 3700624 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.52 | 43.0 | 3.92e-01 | 90.9% | 93.3% |
| 3977583 | 503.1.1.1 ↗ | extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › Pro_dh-DNA_bdg | 0.52 | 37.0 | 3.75e-01 | 80.2% | 73.6% |
| 3263557 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 41.0 | 4.16e-01 | 84.3% | 92.5% |
| 3829440 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.51 | 46.0 | 3.01e-01 | 99.2% | 39.1% |
| 1146575 | 109.39.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › transcription anti-terminator antagonist UpxZ › transcription anti-terminator antagonist UpxZ › UpxZ | 0.51 | 39.0 | 3.64e-01 | 89.3% | 63.6% |
| 3017672 | 5001.1.1.6 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin | 0.51 | 42.0 | 3.46e-01 | 90.9% | 70.4% |