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MK448659.1__QBX13525.1__JavanS89_0016__00012

Bact-Vir

MK448659.1__QBX13525.1__JavanS89_0016__00012

Identity

Accession:
MK448659 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Streptococcus_satellite_phage_Javan89

TaxID: 2558866

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-110
PDB
Domain cluster: rep: MK448384.1__QBX08341.1__JavanS250_0008__00018__D102-169
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1np7A02 1.25.40.80 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.65 47.0 4.30e-01 77.9% 68.1%
3k8pC01 1.20.58.1440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 46.0 4.35e-01 76.7% 90.5%
4bx8A04 1.25.40.850 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Sec1/Munc18 (SM) protein, domain 3b 0.62 45.0 4.50e-01 80.2% 80.4%
1avoB00 1.20.120.180 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain 0.57 30.0 2.56e-01 96.5% 32.1%
3hl6A02 1.20.58.700 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 39.0 3.60e-01 82.6% 75.7%
3r72A00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.50 35.0 3.14e-01 72.1% 79.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999571 4156.1.1.1 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 0.58 40.0 3.55e-01 74.4% 96.3%
3262169 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.55 40.0 3.33e-01 79.1% 48.2%