←Back to structures

MK448665.1__QBX13662.1__Javan1_0022__00022

Bact-Vir

MK448665.1__QBX13662.1__Javan1_0022__00022

Identity

Accession:
MK448665 ↗
Kingdom:
phage

Quality

82.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan1

TaxID: 2547971

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 44-106
PDB
Domain cluster: rep: NC_071083.1__YP_010683437.1__PQF09_gp43__00043__D112-175
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ol0B00 6.20.90.30 Special › Other non-globular › SH3 type barrels. › 0.74 44.0 5.21e-01 71.4% 92.7%
2vseA05 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.69 61.0 4.71e-01 100.0% 94.4%
6lf2B01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.68 61.0 4.88e-01 100.0% 96.8%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.68 61.0 4.67e-01 100.0% 93.0%
7q5yG01 3.10.20.740 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 45.0 3.92e-01 90.5% 65.3%
3cr8C02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 38.0 2.72e-01 74.6% 79.8%
6cngA02 2.20.28.50 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain 0.53 31.0 3.50e-01 100.0% 89.5%
3tqtA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.53 35.0 3.47e-01 100.0% 63.2%
2ip4A02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.53 36.0 3.58e-01 100.0% 68.2%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4775977 6.1.1.1 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF 0.72 44.0 5.13e-01 71.4% 90.7%
4775964 6.1.1.1 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF 0.65 52.0 4.83e-01 88.9% 100.0%
4267554 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.55 40.0 3.40e-01 79.4% 96.5%
3507673 355.1.1.2 ↗ few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PSI 0.54 33.0 3.54e-01 71.4% 70.9%
3385956 2005.1.1.15 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.53 39.0 2.68e-01 79.4% 70.0%
5000559 2005.1.1.15 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP-sulfurylase 0.51 36.0 2.54e-01 74.6% 80.0%