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MK448687.1__QBX14854.1__Javan159_0004__00004
Bact-VirMK448687.1__QBX14854.1__Javan159_0004__00004
Identity
- Accession:
- MK448687 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-86
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10926.15 best | DUF2800 | 126.0 | 3.10e-36 | 100.0% | 22.0% |
| PF12705.14 | PDDEXK_1 | 22.0 | 2.00e-04 | 97.6% | 25.5% |
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8d3mI01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.71 | 59.0 | 4.43e-01 | 100.0% | 36.7% |
| 5zyuA01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.69 | 61.0 | 4.59e-01 | 98.8% | 42.3% |
| 3sm4A00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.68 | 54.0 | 3.91e-01 | 85.4% | 31.6% |
| 6l4lA02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.68 | 47.0 | 3.96e-01 | 82.9% | 43.4% |
| 1ekjA00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.67 | 49.0 | 3.62e-01 | 76.8% | 51.9% |
| 1qy9A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.66 | 51.0 | 4.11e-01 | 84.1% | 46.6% |
| 4oa3A00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.65 | 45.0 | 3.72e-01 | 78.0% | 41.1% |
| 2qrdE01 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.65 | 44.0 | 3.41e-01 | 91.5% | 31.7% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.64 | 49.0 | 3.79e-01 | 98.8% | 34.5% |
| 4i43B04 | 3.90.1570.40 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › Pre-mRNA-processing-splicing factor 8 (Prp8), endonuclease domain | 0.63 | 43.0 | 3.43e-01 | 75.6% | 33.7% |
| 3vx8A02 | 3.40.140.70 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain | 0.63 | 49.0 | 3.94e-01 | 84.1% | 48.8% |
| 7mi4A01 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.62 | 53.0 | 4.12e-01 | 100.0% | 41.5% |
| 7oo1A02 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.62 | 45.0 | 3.95e-01 | 75.6% | 84.7% |
| 5anpA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.62 | 41.0 | 3.42e-01 | 78.0% | 38.6% |
| 3d2fA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.61 | 41.0 | 4.09e-01 | 81.7% | 66.7% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.61 | 42.0 | 3.76e-01 | 89.0% | 49.6% |
| 3fovA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.61 | 44.0 | 4.17e-01 | 78.0% | 63.7% |
| 4zxhA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.61 | 41.0 | 3.27e-01 | 78.0% | 32.8% |
| 1ym3A00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.61 | 43.0 | 3.32e-01 | 75.6% | 53.9% |
| 2w3qA02 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.60 | 44.0 | 3.54e-01 | 78.0% | 65.9% |
| 2e28A03 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.60 | 43.0 | 3.71e-01 | 76.8% | 75.6% |
| 3m7vA02 | 3.30.70.1250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phosphopentomutase | 0.60 | 42.0 | 3.71e-01 | 76.8% | 49.6% |
| 1u0kA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 48.0 | 4.13e-01 | 95.1% | 54.5% |
| 4gniA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.59 | 41.0 | 4.05e-01 | 81.7% | 67.4% |
| 1tx3D00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.59 | 52.0 | 3.78e-01 | 100.0% | 66.8% |
| 2zyzB02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.59 | 38.0 | 3.67e-01 | 81.7% | 55.8% |
| 2p6wA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 51.0 | 3.79e-01 | 93.9% | 66.0% |
| 4lg3A01 | 3.10.310.90 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.59 | 48.0 | 4.10e-01 | 90.2% | 82.8% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.59 | 51.0 | 3.80e-01 | 100.0% | 44.7% |
| 6rzqA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.58 | 40.0 | 3.99e-01 | 81.7% | 68.2% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.58 | 40.0 | 3.58e-01 | 78.0% | 49.2% |
| 4bgdA08 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 38.0 | 2.92e-01 | 87.8% | 28.1% |
| 2plqA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.57 | 42.0 | 2.82e-01 | 79.3% | 32.9% |
| 7vyuA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 41.0 | 3.28e-01 | 75.6% | 50.9% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.57 | 44.0 | 3.90e-01 | 82.9% | 59.7% |
| 3s3lA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 41.0 | 3.26e-01 | 75.6% | 50.3% |
| 2bueA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 46.0 | 3.61e-01 | 91.5% | 49.7% |
| 3devA02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.56 | 41.0 | 3.70e-01 | 79.3% | 62.9% |
| 1eblA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 40.0 | 3.28e-01 | 75.6% | 53.7% |
| 3fcsB03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.55 | 44.0 | 3.16e-01 | 87.8% | 38.5% |
| 4v2pA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 39.0 | 3.20e-01 | 75.6% | 49.7% |
| 5t3eB01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 38.0 | 3.00e-01 | 76.8% | 33.0% |
| 5by7A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 38.0 | 3.19e-01 | 75.6% | 54.1% |
| 1zowA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 39.0 | 3.30e-01 | 76.8% | 57.6% |
| 3u6yA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 39.0 | 3.70e-01 | 78.0% | 94.9% |
| 3shpA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 36.0 | 2.94e-01 | 80.5% | 34.7% |
| 3ffyA00 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.53 | 35.0 | 3.27e-01 | 89.0% | 50.0% |
| 3g98A00 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 39.0 | 3.56e-01 | 79.3% | 69.4% |
| 6jixA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 39.0 | 2.82e-01 | 80.5% | 41.1% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 39.0 | 3.85e-01 | 78.0% | 98.8% |
| 4jd0A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.53 | 45.0 | 3.27e-01 | 97.6% | 75.1% |
| 2fl4A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 3.53e-01 | 76.8% | 75.0% |
| 7zvjA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 45.0 | 3.24e-01 | 97.6% | 73.1% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.52 | 37.0 | 3.64e-01 | 75.6% | 71.7% |
| 6smoC01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 36.0 | 2.73e-01 | 76.8% | 59.5% |
| 5by7A01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.50 | 36.0 | 2.84e-01 | 76.8% | 93.2% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.50 | 38.0 | 3.30e-01 | 84.1% | 62.1% |
| 3n5mA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 37.0 | 2.67e-01 | 80.5% | 39.4% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031223 | 2008.1.1.204 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF2800 | 0.98 | 95.0 | 6.41e-01 | 100.0% | 32.8% |
| 4960194 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.78 | 69.0 | 4.78e-01 | 100.0% | 30.2% |
| 5066595 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.78 | 67.0 | 5.00e-01 | 100.0% | 39.2% |
| 4927000 | 2008.1.1.217 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UvrD-helicase | 0.77 | 68.0 | 3.74e-01 | 100.0% | 7.2% |
| 5045797 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.76 | 66.0 | 5.00e-01 | 100.0% | 41.1% |
| 5042023 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.75 | 63.0 | 4.83e-01 | 100.0% | 40.0% |
| 3588071 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.75 | 66.0 | 5.28e-01 | 96.3% | 52.5% |
| 3950933 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.74 | 68.0 | 4.68e-01 | 100.0% | 30.9% |
| 4008820 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.74 | 51.0 | 4.27e-01 | 76.8% | 43.0% |
| 4943737 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 64.0 | 5.05e-01 | 93.9% | 51.2% |
| 5005260 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.74 | 65.0 | 4.56e-01 | 100.0% | 31.2% |
| 3969697 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 65.0 | 5.23e-01 | 97.6% | 54.8% |
| 5005960 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.73 | 61.0 | 4.74e-01 | 100.0% | 41.3% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.73 | 59.0 | 4.75e-01 | 100.0% | 44.5% |
| 5056632 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.73 | 62.0 | 4.43e-01 | 100.0% | 32.1% |
| 5079183 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.73 | 61.0 | 4.43e-01 | 100.0% | 34.1% |
| 4982078 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.72 | 63.0 | 4.28e-01 | 100.0% | 27.2% |
| 4180620 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.71 | 60.0 | 4.64e-01 | 100.0% | 41.6% |
| 5003779 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 59.0 | 4.17e-01 | 100.0% | 29.4% |
| 4459358 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.69 | 52.0 | 4.58e-01 | 79.3% | 59.2% |
| 3629495 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 61.0 | 4.20e-01 | 98.8% | 31.4% |
| 3195250 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 45.0 | 3.30e-01 | 82.9% | 25.7% |
| 3499164 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 49.0 | 3.29e-01 | 91.5% | 19.7% |
| 4955488 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 54.0 | 4.89e-01 | 98.8% | 62.7% |
| 3480310 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 60.0 | 4.42e-01 | 98.8% | 39.1% |
| 3821558 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.69 | 54.0 | 3.52e-01 | 91.5% | 20.1% |
| 4098518 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.68 | 54.0 | 3.48e-01 | 95.1% | 18.4% |
| 4122042 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.68 | 43.0 | 3.67e-01 | 78.0% | 39.3% |
| 4876381 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.68 | 59.0 | 4.88e-01 | 98.8% | 55.6% |
| 4946846 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.68 | 55.0 | 4.44e-01 | 100.0% | 44.8% |
| 4933945 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.67 | 58.0 | 4.33e-01 | 100.0% | 37.2% |
| 1007200 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.67 | 45.0 | 3.74e-01 | 78.0% | 39.3% |
| 4290285 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 59.0 | 4.24e-01 | 100.0% | 35.9% |
| 3170447 | 2008.6.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains › ACC_central | 0.67 | 48.0 | 3.44e-01 | 80.5% | 25.3% |
| 4590621 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.67 | 52.0 | 3.42e-01 | 95.1% | 19.4% |
| 3264848 | 2492.1.1.36 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like | 0.67 | 49.0 | 3.86e-01 | 82.9% | 37.1% |
| 4950447 | 2008.1.1.87 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YhcG_C | 0.66 | 47.0 | 3.84e-01 | 78.0% | 39.6% |
| 3445608 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.66 | 46.0 | 3.16e-01 | 72.0% | 26.3% |
| 3221910 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.66 | 58.0 | 4.13e-01 | 100.0% | 36.9% |
| 3508213 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 54.0 | 4.22e-01 | 90.2% | 41.1% |
| 4973169 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.66 | 53.0 | 4.92e-01 | 85.4% | 79.0% |
| 5077420 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.66 | 55.0 | 4.11e-01 | 98.8% | 35.1% |
| 5050006 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.66 | 52.0 | 4.35e-01 | 85.4% | 79.3% |
| 1687168 | 2492.1.1.26 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › MPN_2A_DUB_like | 0.66 | 50.0 | 3.90e-01 | 82.9% | 58.7% |
| 164523 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.66 | 44.0 | 3.84e-01 | 75.6% | 46.3% |
| 4670642 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.65 | 46.0 | 4.15e-01 | 73.2% | 56.6% |
| 4959669 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 54.0 | 4.01e-01 | 100.0% | 32.9% |
| 3961866 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.65 | 47.0 | 4.07e-01 | 78.0% | 48.5% |
| 5076203 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.65 | 55.0 | 4.26e-01 | 100.0% | 41.0% |
| 4953680 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.65 | 56.0 | 3.99e-01 | 100.0% | 31.3% |
| 3409450 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.65 | 42.0 | 3.55e-01 | 97.6% | 37.9% |
| 4628389 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.65 | 44.0 | 3.86e-01 | 76.8% | 47.5% |
| 4939916 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.65 | 38.0 | 3.74e-01 | 76.8% | 52.2% |
| 5000157 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.64 | 58.0 | 4.31e-01 | 98.8% | 45.5% |
| 4966546 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.64 | 54.0 | 3.88e-01 | 100.0% | 29.9% |
| 4667311 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.64 | 49.0 | 4.42e-01 | 82.9% | 64.3% |
| 3691245 | 2008.1.1.27 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 | 0.64 | 50.0 | 3.59e-01 | 95.1% | 27.8% |
| 4311371 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.63 | 46.0 | 4.13e-01 | 79.3% | 60.0% |
| 2439587 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.62 | 55.0 | 3.99e-01 | 100.0% | 36.5% |
| 3188735 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.62 | 45.0 | 4.06e-01 | 78.0% | 57.4% |
| 4972566 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.61 | 45.0 | 3.94e-01 | 76.8% | 80.8% |
| 5004397 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 51.0 | 4.08e-01 | 90.2% | 49.4% |
| 4002474 | 3105.1.1.4 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › MOLO1 | 0.61 | 45.0 | 3.45e-01 | 78.0% | 34.2% |
| 4988165 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 45.0 | 3.54e-01 | 95.1% | 36.6% |
| 865573 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.61 | 47.0 | 3.93e-01 | 86.6% | 46.7% |
| 3798247 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.61 | 45.0 | 3.60e-01 | 78.0% | 57.5% |
| 3960342 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.61 | 40.0 | 3.09e-01 | 78.0% | 31.4% |
| 3976411 | 2008.1.1.58 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF3799 | 0.60 | 53.0 | 3.77e-01 | 100.0% | 40.2% |
| 4996628 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 44.0 | 3.32e-01 | 79.3% | 47.4% |
| 4223379 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.59 | 44.0 | 4.04e-01 | 82.9% | 60.9% |
| 3935806 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.58 | 42.0 | 3.18e-01 | 89.0% | 31.5% |
| 4159074 | 213.1.1.28 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_8 | 0.57 | 44.0 | 4.21e-01 | 85.4% | 86.0% |
| 3273833 | 207.1.1.12 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP | 0.56 | 36.0 | 2.42e-01 | 93.9% | 15.7% |
| 3986356 | 304.55.1.14 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp | 0.55 | 41.0 | 2.85e-01 | 79.3% | 57.9% |
| 4152192 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.55 | 39.0 | 3.44e-01 | 74.4% | 79.2% |
| 4351693 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.53 | 41.0 | 3.69e-01 | 82.9% | 61.7% |
| 3936405 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.53 | 43.0 | 3.20e-01 | 89.0% | 34.3% |
| 4981995 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 38.0 | 3.12e-01 | 81.7% | 39.4% |
| 5037760 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.53 | 42.0 | 3.60e-01 | 90.2% | 76.6% |
| 4129142 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.52 | 38.0 | 2.69e-01 | 78.0% | 25.4% |
| 4932677 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 38.0 | 3.38e-01 | 79.3% | 63.3% |
| 5053674 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.51 | 43.0 | 3.43e-01 | 98.8% | 88.6% |
| 3934768 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.51 | 39.0 | 2.96e-01 | 89.0% | 32.9% |
D2
medium
residues 93-171
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10926.15 best | DUF2800 | 95.3 | 6.80e-27 | 100.0% | 21.2% |
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 62.0 | 5.39e-01 | 87.3% | 87.5% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 59.0 | 4.77e-01 | 92.4% | 74.7% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.70 | 48.0 | 5.03e-01 | 83.5% | 78.6% |
| 3lnnB03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.68 | 49.0 | 5.28e-01 | 75.9% | 89.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.67 | 47.0 | 3.58e-01 | 73.4% | 97.3% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.66 | 50.0 | 4.92e-01 | 81.0% | 78.8% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 49.0 | 4.73e-01 | 79.7% | 91.1% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 50.0 | 4.56e-01 | 83.5% | 80.8% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.64 | 50.0 | 4.96e-01 | 87.3% | 80.0% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.63 | 52.0 | 4.19e-01 | 88.6% | 77.3% |
| 2w00A05 | 1.20.58.2040 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 43.0 | 3.97e-01 | 78.5% | 54.5% |
| 6r1nA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.63 | 46.0 | 4.22e-01 | 77.2% | 65.0% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 50.0 | 4.41e-01 | 87.3% | 58.5% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.62 | 43.0 | 3.67e-01 | 72.2% | 45.1% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.62 | 51.0 | 4.81e-01 | 93.7% | 92.1% |
| 2c2jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 48.0 | 3.91e-01 | 87.3% | 83.6% |
| 4lunU00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 53.0 | 3.54e-01 | 96.2% | 40.5% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.61 | 45.0 | 4.62e-01 | 77.2% | 83.8% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 48.0 | 4.59e-01 | 86.1% | 95.7% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.61 | 43.0 | 4.21e-01 | 73.4% | 69.4% |
| 4k7rA01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.60 | 45.0 | 2.99e-01 | 81.0% | 23.1% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.60 | 40.0 | 4.37e-01 | 75.9% | 88.5% |
| 2p4vA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.59 | 42.0 | 4.34e-01 | 75.9% | 84.2% |
| 2r9iA00 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.59 | 43.0 | 4.45e-01 | 78.5% | 87.3% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 41.0 | 4.04e-01 | 73.4% | 73.5% |
| 3k9vA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 47.0 | 3.00e-01 | 92.4% | 17.5% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.57 | 45.0 | 4.01e-01 | 87.3% | 86.2% |
| 3rpmA02 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.57 | 41.0 | 4.06e-01 | 88.6% | 71.8% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 40.0 | 4.05e-01 | 79.7% | 85.9% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.54 | 42.0 | 4.13e-01 | 92.4% | 78.3% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.54 | 43.0 | 4.36e-01 | 86.1% | 93.4% |
| 3g80A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 39.0 | 4.04e-01 | 77.2% | 84.9% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.54 | 41.0 | 3.63e-01 | 82.3% | 72.6% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.50 | 39.0 | 3.70e-01 | 87.3% | 77.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4433563 | 605.1.1.25 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Zds_C | 0.69 | 49.0 | 5.35e-01 | 79.7% | 90.8% |
| 4628387 | 616.1.1.1 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 | 0.67 | 52.0 | 5.14e-01 | 83.5% | 83.5% |
| 3264174 | 622.4.1.58 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › PF26756 | 0.66 | 51.0 | 5.10e-01 | 83.5% | 95.0% |
| 3315495 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.66 | 48.0 | 4.76e-01 | 78.5% | 72.9% |
| 4408647 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.66 | 47.0 | 4.32e-01 | 75.9% | 61.0% |
| 4027486 | 4984.1.1.1 ↗ | alpha bundles › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › PFEMP | 0.64 | 50.0 | 4.03e-01 | 87.3% | 83.5% |
| 3862724 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 45.0 | 4.16e-01 | 74.7% | 60.0% |
| 4075864 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.64 | 43.0 | 4.76e-01 | 74.7% | 100.0% |
| 3944950 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 44.0 | 4.78e-01 | 77.2% | 89.2% |
| 3513888 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 49.0 | 3.93e-01 | 83.5% | 69.0% |
| 5048050 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 45.0 | 3.10e-01 | 82.3% | 21.4% |
| 4972154 | 604.12.1.135 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Oxidored_q2 | 0.62 | 49.0 | 4.58e-01 | 87.3% | 78.0% |
| 3221932 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 47.0 | 4.32e-01 | 82.3% | 74.3% |
| 3421046 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 49.0 | 4.74e-01 | 87.3% | 90.0% |
| 4461398 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.61 | 45.0 | 2.78e-01 | 77.2% | 13.3% |
| 4879470 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.61 | 46.0 | 4.75e-01 | 81.0% | 93.3% |
| 3586561 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.60 | 42.0 | 3.81e-01 | 75.9% | 54.8% |
| 3942983 | 101.1.4.8 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CP76 | 0.59 | 49.0 | 4.05e-01 | 93.7% | 62.7% |
| 3283060 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.59 | 41.0 | 4.16e-01 | 73.4% | 93.8% |
| 4520394 | 5063.1.1.1 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › PSI_PSAK | 0.58 | 38.0 | 4.13e-01 | 75.9% | 76.8% |
| 3608485 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.58 | 42.0 | 3.76e-01 | 78.5% | 53.0% |
| 3958889 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 3.59e-01 | 86.1% | 82.4% |
| 3503877 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.56 | 44.0 | 3.72e-01 | 89.9% | 57.9% |
| 4405928 | 5086.1.1.196 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_YknX | 0.55 | 39.0 | 4.11e-01 | 77.2% | 87.1% |