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MK448700.1__QBX15532.1__Javan191_0001__00001
Bact-VirMK448700.1__QBX15532.1__Javan191_0001__00001
Identity
- Accession:
- MK448700 ↗
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-21_171-304
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_193576_prodigal-single.1__X__X__00294__D106-220
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26568.1 best | RE_BanI_C | 31.7 | 1.70e-07 | 95.9% | 52.2% |
| PF04556.19 | DpnII | 25.9 | 8.30e-06 | 89.7% | 33.7% |
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dc1A01 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.80 | 74.0 | 6.33e-01 | 99.3% | 95.9% |
| 3ktoA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 55.0 | 5.91e-01 | 91.0% | 91.8% |
| 2csuA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.69 | 59.0 | 5.60e-01 | 89.0% | 91.6% |
| 1d5wA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.69 | 51.0 | 5.46e-01 | 88.3% | 89.4% |
| 1bmtA02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.68 | 54.0 | 5.27e-01 | 90.3% | 75.9% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.66 | 55.0 | 4.77e-01 | 88.3% | 94.2% |
| 2qq5A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 55.0 | 4.63e-01 | 88.3% | 87.0% |
| 4bxoA01 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 52.0 | 5.40e-01 | 89.0% | 89.6% |
| 4xymC03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.66 | 55.0 | 5.28e-01 | 89.7% | 88.8% |
| 1auqA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.66 | 57.0 | 5.01e-01 | 92.4% | 85.6% |
| 2ze3A01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.66 | 49.0 | 4.15e-01 | 76.6% | 90.5% |
| 3r7wA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 56.0 | 5.16e-01 | 91.0% | 93.4% |
| 1eucB03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.65 | 52.0 | 5.21e-01 | 88.3% | 83.6% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 43.0 | 4.79e-01 | 93.1% | 88.2% |
| 2lciA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 51.0 | 5.29e-01 | 93.1% | 90.3% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.63 | 52.0 | 5.09e-01 | 89.7% | 95.1% |
| 5hj7A01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 43.0 | 4.40e-01 | 89.7% | 73.2% |
| 5macA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.61 | 45.0 | 3.46e-01 | 76.6% | 85.9% |
| 3iv3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 47.0 | 3.60e-01 | 80.0% | 91.2% |
| 3efoB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.61 | 50.0 | 4.26e-01 | 89.0% | 95.9% |
| 3qfwB02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.60 | 44.0 | 3.72e-01 | 76.6% | 90.0% |
| 1telA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.60 | 44.0 | 3.58e-01 | 76.6% | 84.8% |
| 1vcvA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 46.0 | 3.94e-01 | 80.0% | 93.8% |
| 2x6rB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 50.0 | 4.37e-01 | 89.7% | 79.3% |
| 3h2zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 49.0 | 4.44e-01 | 89.0% | 92.0% |
| 1e43A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 45.0 | 3.59e-01 | 80.0% | 96.9% |
| 2p11A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.59 | 49.0 | 4.90e-01 | 89.0% | 93.1% |
| 1e40A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 45.0 | 3.27e-01 | 80.0% | 97.7% |
| 3b8iC00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.58 | 43.0 | 3.52e-01 | 77.2% | 74.8% |
| 1jztA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.58 | 51.0 | 4.26e-01 | 94.5% | 99.6% |
| 4cu7A03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.58 | 45.0 | 3.43e-01 | 82.1% | 91.6% |
| 5i0fB03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 44.0 | 3.28e-01 | 80.7% | 90.9% |
| 4ns4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 48.0 | 3.94e-01 | 91.7% | 82.7% |
| 3qz6A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.57 | 43.0 | 3.55e-01 | 79.3% | 83.8% |
| 4pqgA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 48.0 | 4.53e-01 | 91.0% | 81.0% |
| 1tb3E00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 46.0 | 3.56e-01 | 87.6% | 90.4% |
| 2bpoA04 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.56 | 39.0 | 3.82e-01 | 71.7% | 67.3% |
| 4zemA02 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.56 | 43.0 | 4.12e-01 | 81.4% | 82.1% |
| 5ze7A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 44.0 | 4.32e-01 | 90.3% | 78.1% |
| 2fliC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 4.08e-01 | 91.0% | 90.9% |
| 2wj6A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 47.0 | 4.19e-01 | 91.7% | 83.3% |
| 4g9pA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.55 | 47.0 | 3.75e-01 | 92.4% | 96.2% |
| 4l80D00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.55 | 46.0 | 3.51e-01 | 91.0% | 72.1% |
| 2jfqA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 35.0 | 3.88e-01 | 82.8% | 81.6% |
| 3nwrA02 | 3.20.20.110 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain | 0.54 | 45.0 | 3.64e-01 | 91.0% | 78.3% |
| 2agkA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 41.0 | 3.58e-01 | 82.1% | 96.1% |
| 1myrA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 45.0 | 3.12e-01 | 91.7% | 82.0% |
| 3l5kA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 47.0 | 4.63e-01 | 96.6% | 100.0% |
| 4idsA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.52 | 43.0 | 3.89e-01 | 89.0% | 94.9% |
| 1fuyB01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 41.0 | 3.99e-01 | 84.8% | 84.8% |
| 7oh2A01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.52 | 43.0 | 3.34e-01 | 91.0% | 95.5% |
| 3rptA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.51 | 39.0 | 3.31e-01 | 80.7% | 72.3% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 44.0 | 3.73e-01 | 93.1% | 94.6% |
| 1d8cA01 | 3.20.20.360 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Malate synthase, domain 3 | 0.51 | 44.0 | 3.16e-01 | 95.2% | 80.0% |
| 2yvtA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.50 | 41.0 | 3.49e-01 | 89.7% | 93.8% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4525524 | 2008.1.1.164 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF26568 | 0.87 | 83.0 | 7.73e-01 | 100.0% | 99.4% |
| 3603146 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.87 | 80.0 | 6.18e-01 | 95.9% | 100.0% |
| 3839790 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.83 | 77.0 | 6.08e-01 | 97.2% | 99.6% |
| 4157798 | 2008.1.1.95 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DpnII | 0.80 | 75.0 | 7.47e-01 | 99.3% | 100.0% |
| 4243855 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.76 | 55.0 | 5.60e-01 | 88.3% | 76.4% |
| 4336609 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.74 | 54.0 | 5.90e-01 | 91.7% | 89.4% |
| 4009734 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.71 | 59.0 | 5.44e-01 | 87.6% | 88.6% |
| 4998161 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 59.0 | 5.78e-01 | 87.6% | 97.4% |
| 4324611 | 2008.1.1.166 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_XcyI | 0.70 | 61.0 | 4.68e-01 | 92.4% | 48.6% |
| 3672327 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.70 | 59.0 | 5.84e-01 | 89.0% | 93.3% |
| 4525523 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.70 | 58.0 | 4.75e-01 | 87.6% | 61.4% |
| 3481475 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 59.0 | 4.74e-01 | 91.0% | 78.9% |
| 4943043 | 2007.1.3.71 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PAS_4 | 0.70 | 53.0 | 5.54e-01 | 89.7% | 87.7% |
| 10020 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.69 | 59.0 | 5.64e-01 | 89.0% | 93.3% |
| 4946557 | 2004.1.1.119 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA | 0.69 | 58.0 | 5.41e-01 | 89.0% | 90.6% |
| 4291338 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.69 | 53.0 | 5.39e-01 | 89.7% | 81.4% |
| 3667891 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.68 | 57.0 | 5.06e-01 | 90.3% | 93.8% |
| 3343173 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.68 | 57.0 | 5.28e-01 | 90.3% | 93.0% |
| 3952449 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.67 | 49.0 | 5.50e-01 | 83.4% | 98.2% |
| 3486923 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.67 | 56.0 | 5.40e-01 | 89.7% | 79.4% |
| 3059315 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.67 | 54.0 | 5.52e-01 | 89.7% | 87.8% |
| 4410278 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.67 | 52.0 | 4.85e-01 | 80.0% | 79.4% |
| 3436711 | 129.1.1.55 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Slo-like_RCK | 0.67 | 52.0 | 4.84e-01 | 80.0% | 79.4% |
| 3346163 | 2003.1.1.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Slo-like_RCK | 0.67 | 52.0 | 4.95e-01 | 80.0% | 84.2% |
| 4338769 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.67 | 55.0 | 5.27e-01 | 89.7% | 75.6% |
| 3181827 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.67 | 54.0 | 5.12e-01 | 89.7% | 72.9% |
| 3594666 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.67 | 57.0 | 4.68e-01 | 91.0% | 94.9% |
| 4155839 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.66 | 54.0 | 5.33e-01 | 89.7% | 82.7% |
| 3925074 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.66 | 55.0 | 5.04e-01 | 89.7% | 96.3% |
| 3272537 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.65 | 55.0 | 4.59e-01 | 90.3% | 96.3% |
| 4929183 | 2007.3.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA | 0.64 | 58.0 | 5.14e-01 | 98.6% | 93.8% |
| 4928402 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 49.0 | 5.43e-01 | 85.5% | 100.0% |
| 5041197 | 2008.1.1.30 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Tn7_TnsA-like_N | 0.63 | 45.0 | 4.29e-01 | 84.1% | 61.8% |
| 3218356 | 2006.1.6.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 | 0.63 | 53.0 | 4.52e-01 | 91.0% | 92.3% |
| 5055617 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.62 | 47.0 | 3.88e-01 | 79.3% | 87.5% |
| 3178310 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 43.0 | 3.25e-01 | 70.3% | 79.3% |
| 4927733 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 44.0 | 4.28e-01 | 74.5% | 79.4% |
| 3293407 | 7516.1.1.7 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › UDPGP | 0.61 | 43.0 | 3.41e-01 | 71.0% | 51.4% |
| 3936276 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.61 | 42.0 | 3.65e-01 | 70.3% | 77.3% |
| 3670467 | 2002.1.1.115 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_79n | 0.61 | 46.0 | 3.78e-01 | 79.3% | 82.6% |
| 4620053 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 57.0 | 5.31e-01 | 100.0% | 90.3% |
| 4968344 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.61 | 43.0 | 3.50e-01 | 73.1% | 53.5% |
| 5045678 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.60 | 51.0 | 4.57e-01 | 91.7% | 64.4% |
| 3221972 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 45.0 | 4.10e-01 | 78.6% | 99.0% |
| 3351969 | 2007.9.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR | 0.59 | 49.0 | 4.66e-01 | 89.0% | 93.7% |
| 4046202 | 2003.1.1.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Mannitol_dh | 0.59 | 49.0 | 4.38e-01 | 89.0% | 91.7% |
| None | — | 0.59 | 49.0 | 4.35e-01 | 89.0% | 91.7% | |
| 4967513 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.59 | 50.0 | 4.61e-01 | 91.0% | 72.4% |
| 4012672 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.58 | 50.0 | 3.30e-01 | 93.1% | 59.4% |
| 5057806 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.58 | 49.0 | 4.56e-01 | 91.0% | 77.8% |
| 4965250 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 48.0 | 3.85e-01 | 86.9% | 89.3% |
| 3178489 | 7512.1.1.84 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1, Glycogen_syn | 0.58 | 49.0 | 3.64e-01 | 91.0% | 68.4% |
| 3585701 | 7512.1.1.18 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycogen_syn | 0.58 | 46.0 | 3.84e-01 | 83.4% | 68.2% |
| 4057948 | 7512.1.1.12 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_tran_28_C | 0.58 | 49.0 | 4.51e-01 | 90.3% | 73.5% |
| 3928585 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.58 | 40.0 | 3.49e-01 | 71.0% | 76.9% |
| 3509905 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.56 | 48.0 | 3.83e-01 | 91.0% | 86.2% |
| 4996596 | 7569.1.1.5 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › DUF6884 | 0.55 | 46.0 | 4.63e-01 | 90.3% | 95.3% |
| None | — | 0.55 | 37.0 | 3.79e-01 | 84.1% | 69.2% | |
| 3267879 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.55 | 43.0 | 4.49e-01 | 86.2% | 90.0% |
| 4948525 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.55 | 44.0 | 3.78e-01 | 85.5% | 89.3% |
| 164705 | 2007.1.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › ATC-like › Asp_Glu_race | 0.54 | 36.0 | 3.49e-01 | 81.4% | 59.6% |
| 4567626 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 43.0 | 3.61e-01 | 85.5% | 73.5% |
| 4949380 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.53 | 46.0 | 3.76e-01 | 93.1% | 85.8% |
| 4558836 | 7514.1.1.6 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › PF26733 | 0.52 | 40.0 | 3.99e-01 | 82.1% | 78.0% |
| 4244555 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.50 | 42.0 | 3.33e-01 | 91.7% | 74.3% |
D2
high
residues 31-163
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d1dA01 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.55 | 41.0 | 4.08e-01 | 78.9% | 97.1% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.54 | 28.0 | 3.36e-01 | 70.7% | 73.0% |