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MK448703.1__QBX15722.1__Javan207_0036__00036

Bact-Vir

MK448703.1__QBX15722.1__Javan207_0036__00036

Identity

Accession:
MK448703 ↗
Kingdom:
phage

Quality

75.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan207

TaxID: 2548047

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-58
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 47.0 4.75e-01 91.2% 87.3%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.53 38.0 3.59e-01 89.5% 59.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3442609 387.1.1.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.67 50.0 5.00e-01 84.2% 78.3%
3935079 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 48.0 4.64e-01 84.2% 70.8%
3432379 387.1.1.10 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related › zf-GRF 0.64 48.0 4.64e-01 84.2% 72.3%
3995183 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.62 53.0 3.58e-01 100.0% 26.4%
3970039 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.61 41.0 3.11e-01 93.0% 28.6%
3244142 331.18.1.4 ↗ a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B 0.61 48.0 3.34e-01 91.2% 88.1%
4002681 377.1.2.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger 0.59 50.0 4.39e-01 100.0% 73.3%
3504015 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 48.0 4.30e-01 100.0% 68.2%
3744353 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.53 40.0 4.13e-01 94.7% 87.3%
3955047 376.1.2.22 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › PF27609 0.52 36.0 3.64e-01 77.2% 96.7%