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MK448716.1__QBX16397.1__Javan249_0031__00031
Bact-VirMK448716.1__QBX16397.1__Javan249_0031__00031
Identity
- Accession:
- MK448716 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-78
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 42.0 | 4.05e-01 | 100.0% | 55.6% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.66 | 49.0 | 4.16e-01 | 78.9% | 60.7% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.66 | 51.0 | 4.17e-01 | 84.5% | 80.7% |
| 1p5dX04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.65 | 49.0 | 4.56e-01 | 84.5% | 62.4% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.65 | 45.0 | 3.66e-01 | 71.8% | 83.1% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.65 | 56.0 | 4.27e-01 | 100.0% | 79.8% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.63 | 46.0 | 3.21e-01 | 78.9% | 25.3% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.63 | 51.0 | 3.94e-01 | 88.7% | 65.0% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.63 | 48.0 | 4.30e-01 | 85.9% | 70.4% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.62 | 53.0 | 4.50e-01 | 100.0% | 61.7% |
| 3doaA01 | 2.30.310.10 | Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain | 0.62 | 51.0 | 4.00e-01 | 91.5% | 73.2% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 49.0 | 3.97e-01 | 87.3% | 57.0% |
| 2fblB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.61 | 50.0 | 3.90e-01 | 100.0% | 42.6% |
| 2nykA01 | 3.30.500.30 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.60 | 53.0 | 4.20e-01 | 100.0% | 53.4% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.59 | 46.0 | 4.02e-01 | 84.5% | 55.7% |
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.59 | 51.0 | 4.71e-01 | 100.0% | 77.9% |
| 6vp6A03 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 46.0 | 2.99e-01 | 87.3% | 94.2% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.57 | 43.0 | 4.09e-01 | 81.7% | 94.0% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 48.0 | 3.32e-01 | 100.0% | 98.5% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.54 | 47.0 | 3.14e-01 | 100.0% | 80.1% |
| 2ntkB00 | 3.60.20.20 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like | 0.54 | 46.0 | 3.45e-01 | 100.0% | 88.6% |
| 1v7wA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.54 | 47.0 | 3.13e-01 | 100.0% | 48.0% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 46.0 | 3.83e-01 | 100.0% | 67.9% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 48.0 | 2.97e-01 | 100.0% | 90.3% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 47.0 | 3.46e-01 | 97.2% | 76.5% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.53 | 42.0 | 4.19e-01 | 85.9% | 97.3% |
| 3h1qA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 44.0 | 3.59e-01 | 100.0% | 82.4% |
| 3q6aB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 3.66e-01 | 97.2% | 60.4% |
| 7vljA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.52 | 39.0 | 3.67e-01 | 85.9% | 63.4% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.31e-01 | 100.0% | 72.3% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.31e-01 | 100.0% | 57.8% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 37.0 | 3.54e-01 | 81.7% | 79.1% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 3.65e-01 | 100.0% | 71.8% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.62e-01 | 100.0% | 62.9% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.51 | 40.0 | 3.31e-01 | 94.4% | 50.6% |
| 1uyjA02 | 2.170.15.10 | Mainly Beta › Beta Complex › Proaerolysin; Chain A, domain 3 › Proaerolysin, chain A, domain 3 | 0.51 | 43.0 | 3.25e-01 | 100.0% | 82.2% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 40.0 | 3.19e-01 | 93.0% | 52.4% |
| 4btfA03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 39.0 | 3.45e-01 | 85.9% | 69.6% |
| 5vxzA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 44.0 | 3.23e-01 | 98.6% | 58.0% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 38.0 | 3.28e-01 | 84.5% | 68.9% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4285199 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.71 | 55.0 | 4.97e-01 | 83.1% | 69.5% |
| 3512689 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.68 | 55.0 | 3.48e-01 | 87.3% | 93.2% |
| 3782489 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 54.0 | 3.22e-01 | 85.9% | 73.7% |
| 3596085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 49.0 | 4.77e-01 | 78.9% | 91.3% |
| 3387958 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.66 | 55.0 | 4.13e-01 | 100.0% | 40.6% |
| 3416070 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.65 | 54.0 | 3.37e-01 | 88.7% | 95.2% |
| 5013018 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 45.0 | 3.63e-01 | 71.8% | 42.3% |
| 5051699 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.64 | 49.0 | 4.33e-01 | 84.5% | 58.2% |
| 4569249 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.64 | 54.0 | 4.99e-01 | 93.0% | 86.7% |
| 3671668 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.64 | 50.0 | 3.74e-01 | 85.9% | 55.1% |
| 2538670 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.63 | 43.0 | 4.80e-01 | 71.8% | 96.3% |
| 4028683 | 3504.3.1.0 ↗ | beta barrels › MutM N-terminal domain-like › Fibrinogen binding protein N-terminal domain › Fibrinogen binding protein N-terminal domain | 0.63 | 52.0 | 3.89e-01 | 91.5% | 75.6% |
| 5014493 | 331.3.1.12 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › STK_08120-like | 0.63 | 49.0 | 3.52e-01 | 88.7% | 49.6% |
| 4191031 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.62 | 51.0 | 3.28e-01 | 88.7% | 64.8% |
| 3999576 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.61 | 51.0 | 4.14e-01 | 97.2% | 52.4% |
| 3474457 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.60 | 47.0 | 4.32e-01 | 85.9% | 87.4% |
| 4122018 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.58 | 43.0 | 3.88e-01 | 78.9% | 70.0% |
| 3186839 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 51.0 | 3.17e-01 | 94.4% | 97.3% |
| 3394516 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.58 | 47.0 | 3.72e-01 | 87.3% | 56.9% |
| 3910955 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.58 | 52.0 | 3.68e-01 | 98.6% | 52.4% |
| 5059595 | 213.1.1.21 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C | 0.58 | 42.0 | 3.51e-01 | 78.9% | 66.2% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.57 | 48.0 | 4.22e-01 | 95.8% | 93.6% |
| 3276429 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.56 | 51.0 | 3.29e-01 | 100.0% | 92.3% |
| 4960423 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 49.0 | 3.14e-01 | 97.2% | 85.4% |
| 3487462 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 49.0 | 4.05e-01 | 100.0% | 70.8% |
| 3932344 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.55 | 50.0 | 3.18e-01 | 100.0% | 84.7% |
| 3332730 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.55 | 45.0 | 2.89e-01 | 91.5% | 72.1% |
| 3484246 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 46.0 | 2.95e-01 | 97.2% | 62.1% |
| 3507419 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.54 | 49.0 | 3.53e-01 | 98.6% | 61.1% |
| 3507129 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.54 | 48.0 | 3.63e-01 | 98.6% | 61.8% |
| 3743793 | 5.1.4.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 | 0.54 | 45.0 | 2.78e-01 | 91.5% | 68.0% |
| 4025460 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.06e-01 | 97.2% | 91.4% |
| 3463667 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.54 | 47.0 | 3.09e-01 | 100.0% | 99.4% |
| 3261967 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 49.0 | 3.39e-01 | 100.0% | 76.0% |
| 3979195 | 274.1.1.35 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF2509 | 0.54 | 42.0 | 3.60e-01 | 88.7% | 55.2% |
| 1400361 | 5.1.3.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5128 | 0.54 | 45.0 | 2.94e-01 | 95.8% | 42.4% |
| 3412515 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.54 | 43.0 | 2.64e-01 | 93.0% | 38.7% |
| 4636176 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.54 | 42.0 | 2.79e-01 | 87.3% | 50.3% |
| 3923721 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 47.0 | 2.97e-01 | 95.8% | 89.9% |
| 4229035 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.53 | 46.0 | 3.38e-01 | 98.6% | 68.5% |
| 5070684 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 47.0 | 3.39e-01 | 100.0% | 74.5% |
| 4602917 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.53 | 48.0 | 3.08e-01 | 100.0% | 73.0% |
| 4643284 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.53 | 48.0 | 3.10e-01 | 100.0% | 77.3% |
| 3306468 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.53 | 48.0 | 3.52e-01 | 100.0% | 41.7% |
| 3765027 | 5.1.4.85 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N | 0.53 | 43.0 | 2.72e-01 | 90.1% | 27.3% |
| 3332798 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.52 | 42.0 | 3.16e-01 | 87.3% | 50.3% |
| 5019907 | 5.1.5.233 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PD40 | 0.52 | 46.0 | 3.01e-01 | 98.6% | 91.1% |
| None | — | 0.52 | 47.0 | 2.70e-01 | 100.0% | 25.1% | |
| 3779299 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 47.0 | 2.70e-01 | 100.0% | 25.8% |
| 5025335 | 512.1.1.0 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) | 0.52 | 43.0 | 3.22e-01 | 94.4% | 78.9% |
| 3514491 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.52 | 46.0 | 2.84e-01 | 97.2% | 17.7% |
| 3196041 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 41.0 | 2.69e-01 | 94.4% | 43.3% |
| 4521584 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 45.0 | 2.94e-01 | 98.6% | 92.2% |
| 5013176 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.51 | 40.0 | 3.94e-01 | 83.1% | 90.7% |
| 3678427 | 5.1.4.379 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 | 0.51 | 42.0 | 2.84e-01 | 93.0% | 30.1% |
| 3673032 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 36.0 | 3.66e-01 | 91.5% | 78.6% |
| 5081796 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 44.0 | 3.28e-01 | 94.4% | 81.8% |
| 3417117 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 46.0 | 2.94e-01 | 100.0% | 82.1% |