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MK448720.1__QBX16563.1__Javan261_0003__00003

Bact-Vir

MK448720.1__QBX16563.1__Javan261_0003__00003

Identity

Accession:
MK448720 ↗
Kingdom:
phage

Quality

90.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-88
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00438.26 best S-AdoMet_synt_N 38.8 1.50e-09 92.4% 61.6%
CATH (70)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4le5A02 3.30.300.10 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.93 81.0 6.51e-01 91.1% 67.9%
6rk7B02 3.30.300.10 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.91 86.0 7.13e-01 100.0% 66.4%
7r3bE01 3.30.300.10 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.89 75.0 7.38e-01 87.3% 100.0%
3tufA00 1.10.287.4300 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like 0.79 64.0 5.55e-01 89.9% 58.3%
3gkuC02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.79 63.0 6.08e-01 86.1% 91.0%
1lqlA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.79 68.0 6.14e-01 92.4% 97.1%
4mh4A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.78 64.0 5.99e-01 87.3% 97.9%
5o5jC01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.77 66.0 6.33e-01 92.4% 84.4%
2e8eA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.77 68.0 5.71e-01 97.5% 74.2%
4bpeC01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.75 63.0 5.98e-01 91.1% 87.0%
2pt7G01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.74 58.0 5.91e-01 84.8% 100.0%
3bypA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.73 60.0 6.01e-01 91.1% 97.6%
2ql8A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.73 59.0 4.91e-01 88.6% 63.6%
2pn2A00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.73 59.0 4.93e-01 88.6% 65.7%
3kxwA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.72 63.0 5.35e-01 94.9% 69.4%
1ib8A01 3.30.300.70 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal 0.70 57.0 5.62e-01 88.6% 100.0%
4r0mA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.69 60.0 5.37e-01 94.9% 75.9%
4g1iA02 3.30.300.170 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.68 54.0 5.62e-01 87.3% 100.0%
2cxcA02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.67 52.0 5.47e-01 83.5% 100.0%
3n54B03 3.30.300.210 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Nutrient germinant receptor protein C, domain 3 0.67 53.0 4.35e-01 86.1% 95.1%
4hlbA00 3.30.70.2960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 57.0 5.41e-01 97.5% 88.4%
3w5xA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.66 57.0 5.76e-01 96.2% 100.0%
3iplA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.66 55.0 5.41e-01 91.1% 95.2%
4alzA01 3.30.1340.30 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 0.66 48.0 5.26e-01 88.6% 100.0%
6o6eB02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.66 54.0 4.93e-01 91.1% 72.9%
4bkwA03 3.30.500.40 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.65 46.0 4.00e-01 74.7% 54.8%
6vhvA01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.65 54.0 5.16e-01 91.1% 81.7%
1mkyA03 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.65 56.0 5.36e-01 96.2% 90.0%
1f06A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.64 55.0 4.58e-01 94.9% 67.4%
2rrlA01 3.30.750.140 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.64 51.0 4.57e-01 88.6% 64.3%
1amuA04 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.63 52.0 4.89e-01 91.1% 79.2%
8gtzA03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.63 49.0 3.81e-01 86.1% 81.2%
2kgsA01 3.40.1520.20 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › 0.63 49.0 4.41e-01 84.8% 81.8%
1qlmA01 3.10.340.11 Alpha Beta › Roll › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 1 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 1 0.62 47.0 4.13e-01 81.0% 62.7%
2kdnA00 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.62 53.0 4.85e-01 96.2% 77.8%
3bioA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 53.0 4.71e-01 94.9% 66.7%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.62 54.0 3.96e-01 100.0% 91.6%
1no5B00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.61 50.0 4.62e-01 91.1% 80.4%
1xknA00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.61 51.0 3.38e-01 94.9% 91.5%
3laxA00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.60 49.0 4.51e-01 91.1% 72.6%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.60 41.0 3.79e-01 72.2% 64.2%
4fpvB00 3.60.10.10 Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase 0.60 50.0 3.52e-01 93.7% 44.4%
1zbrA00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.59 50.0 3.34e-01 96.2% 93.2%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.59 49.0 3.91e-01 89.9% 53.5%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.59 47.0 3.91e-01 88.6% 54.4%
4g1iA03 3.30.70.1770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 46.0 4.82e-01 92.4% 98.6%
3c24A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 45.0 3.53e-01 83.5% 91.0%
2bh1X00 3.30.300.160 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Type II secretion system, protein E, N-terminal domain 0.59 42.0 4.40e-01 91.1% 88.2%
1dgjA05 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.58 41.0 3.95e-01 75.9% 92.6%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 46.0 3.83e-01 88.6% 53.8%
4dg8A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.57 47.0 4.54e-01 93.7% 81.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 47.0 4.84e-01 92.4% 97.4%
3gt0A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 3.49e-01 97.5% 43.6%
3lx4A02 3.40.950.10 Alpha Beta › 3-Layer(aba) Sandwich › Fe-only Hydrogenase (Larger Subunit); Chain L, domain 3 › Fe-only Hydrogenase (Larger Subunit); Chain L, domain 3 0.55 37.0 2.85e-01 72.2% 66.5%
2rcyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 43.0 3.52e-01 87.3% 91.6%
7tocA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 43.0 3.23e-01 87.3% 77.5%
2gerA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 43.0 3.45e-01 91.1% 90.7%
6hrdA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 45.0 3.44e-01 94.9% 91.6%
2amfA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 40.0 3.38e-01 84.8% 94.6%
3lvuB00 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.53 46.0 3.27e-01 100.0% 89.1%
5b55A01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 36.0 2.84e-01 73.4% 92.6%
7atrA01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.52 45.0 3.23e-01 100.0% 67.5%
1ez0A02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.52 36.0 2.82e-01 87.3% 31.4%
3c7aA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 3.18e-01 91.1% 92.7%
5bseA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 3.32e-01 91.1% 87.3%
2e6xA00 3.10.20.570 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3248 0.52 36.0 3.88e-01 73.4% 100.0%
3triA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 41.0 3.33e-01 91.1% 90.5%
4i5tB00 3.30.428.70 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › ATP adenylyltransferase 0.51 37.0 2.53e-01 77.2% 54.4%
3tghA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.51 37.0 2.50e-01 77.2% 82.9%
1xdpA02 3.30.1840.10 Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain 0.51 42.0 3.23e-01 96.2% 78.2%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4402587 327.17.1.5 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N+S-AdoMet_synt_M 0.92 87.0 5.96e-01 100.0% 39.6%
4279781 327.17.1.1 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N 0.91 87.0 6.93e-01 100.0% 65.7%
3440248 327.17.1.5 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N+S-AdoMet_synt_M 0.91 87.0 6.62e-01 100.0% 57.5%
4051119 327.17.1.5 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N+S-AdoMet_synt_M 0.91 86.0 5.80e-01 100.0% 36.8%
3599210 327.17.1.0 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase 0.91 86.0 7.52e-01 100.0% 83.6%
3292415 327.17.1.1 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N 0.90 77.0 7.04e-01 89.9% 84.0%
3558170 327.17.1.1 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N 0.90 85.0 7.47e-01 100.0% 83.6%
4970157 327.17.1.4 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_C 0.89 84.0 5.26e-01 100.0% 25.2%
4145589 327.13.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system 0.86 73.0 6.55e-01 89.9% 83.8%
4100012 327.13.1.5 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › SpoIIIAH 0.85 70.0 5.97e-01 92.4% 57.6%
5016234 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.83 70.0 6.87e-01 89.9% 91.8%
4928329 327.17.1.1 a+b two layers › Alpha-lytic protease prodomain-like › S-adenosylmethionine synthetase › S-adenosylmethionine synthetase › S-AdoMet_synt_N 0.83 79.0 5.22e-01 100.0% 81.3%
3599522 327.10.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.77 63.0 5.85e-01 88.6% 81.0%
3958648 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.77 63.0 6.50e-01 92.4% 94.7%
4999683 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.77 68.0 6.56e-01 97.5% 88.9%
4955282 327.7.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.76 62.0 6.39e-01 88.6% 100.0%
4980263 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.76 68.0 6.85e-01 96.2% 100.0%
3962900 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.76 60.0 6.34e-01 89.9% 98.6%
3968954 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.76 61.0 6.12e-01 89.9% 86.3%
5012775 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.76 62.0 6.02e-01 89.9% 97.7%
3963230 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.75 65.0 6.50e-01 96.2% 95.0%
5072458 327.7.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.74 60.0 6.34e-01 87.3% 100.0%
4996359 327.5.1.0 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.74 65.0 5.68e-01 94.9% 73.9%
3987655 327.7.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.74 67.0 6.42e-01 98.7% 91.1%
3936542 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.73 60.0 6.09e-01 91.1% 100.0%
4003625 327.11.1.4 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › MRP-S24 0.73 65.0 6.22e-01 98.7% 97.8%
5044613 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.73 58.0 6.07e-01 89.9% 97.1%
3744273 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.73 61.0 6.03e-01 92.4% 100.0%
5066304 3261.1.1.0 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.73 55.0 5.84e-01 87.3% 92.9%
3513624 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.72 59.0 5.81e-01 94.9% 83.5%
3970933 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.72 57.0 5.80e-01 89.9% 86.1%
4949378 327.7.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.72 64.0 6.09e-01 100.0% 89.5%
4029968 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.72 61.0 5.47e-01 92.4% 73.6%
3699798 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.72 63.0 6.03e-01 94.9% 85.6%
3967434 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.72 58.0 6.00e-01 88.6% 96.0%
4348174 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.72 56.0 5.88e-01 88.6% 95.7%
4176611 327.7.1.1 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.72 61.0 5.79e-01 93.7% 83.2%
5057096 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.72 54.0 5.84e-01 87.3% 100.0%
2755279 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.72 52.0 5.59e-01 75.9% 95.4%
3285417 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.71 62.0 6.14e-01 97.5% 97.6%
3958647 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.71 57.0 6.04e-01 97.5% 98.6%
5057097 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.71 55.0 5.80e-01 89.9% 95.7%
5044614 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.71 54.0 5.87e-01 88.6% 100.0%
3979417 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.71 55.0 5.55e-01 89.9% 83.7%
4032064 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.71 61.0 5.77e-01 96.2% 100.0%
4933311 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.71 63.0 5.09e-01 100.0% 74.0%
5047895 327.5.1.10 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › PF27533 0.70 58.0 5.52e-01 91.1% 82.1%
5044612 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.70 56.0 5.78e-01 96.2% 93.3%
3175212 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.70 59.0 5.90e-01 93.7% 91.3%
5014287 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.70 59.0 5.66e-01 92.4% 85.6%
1563558 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.70 56.0 5.59e-01 92.4% 85.2%
4105344 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.70 57.0 5.89e-01 98.7% 96.0%
4938037 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.69 60.0 5.44e-01 94.9% 78.1%
4955801 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.69 59.0 5.80e-01 93.7% 87.1%
3958269 3261.1.1.0 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.69 50.0 5.54e-01 87.3% 100.0%
5031013 316.1.1.27 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.69 57.0 5.01e-01 89.9% 90.4%
5057095 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.69 55.0 5.64e-01 97.5% 92.0%
4036339 327.11.1.18 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › DNA_pol3_a_NI 0.69 54.0 5.58e-01 87.3% 100.0%
4958712 327.5.1.3 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_2 0.68 57.0 5.31e-01 92.4% 85.0%
4937865 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.68 58.0 5.31e-01 94.9% 80.0%
4207826 2003.1.5.174 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr, Methyltransf_15 0.67 55.0 3.61e-01 92.4% 20.0%
1673882 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.67 54.0 5.63e-01 98.7% 97.2%
4933112 316.1.1.27 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.67 58.0 4.88e-01 96.2% 75.6%
5046008 327.5.1.4 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › GH3_C 0.67 57.0 4.86e-01 94.9% 69.2%
5000328 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.67 56.0 5.18e-01 92.4% 73.8%
3595358 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.67 60.0 5.78e-01 100.0% 95.6%
3979017 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.67 55.0 5.66e-01 94.9% 94.7%
5041862 316.1.1.27 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.67 59.0 5.13e-01 98.7% 81.7%
4078161 327.4.1.1 a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.67 58.0 5.85e-01 98.7% 100.0%
4979235 327.5.1.0 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.66 58.0 4.89e-01 98.7% 76.3%
3608510 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.66 58.0 5.63e-01 98.7% 90.0%
4478346 327.4.1.1 a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.66 49.0 5.11e-01 79.7% 100.0%
5078028 3186.1.1.7 a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › DUF2070 0.65 47.0 3.67e-01 82.3% 36.4%
3948005 3261.1.1.1 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.65 54.0 5.47e-01 97.5% 92.5%
4951957 327.5.1.10 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › PF27533 0.65 54.0 5.12e-01 91.1% 81.1%
4955408 316.1.1.0 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.65 57.0 4.93e-01 96.2% 76.7%
5054232 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.65 57.0 5.35e-01 100.0% 100.0%
4132035 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.65 52.0 3.35e-01 91.1% 17.5%
5050086 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.65 51.0 5.32e-01 89.9% 97.1%
3713583 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.64 51.0 4.91e-01 86.1% 100.0%
4986728 316.1.1.27 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.64 54.0 4.84e-01 94.9% 76.5%
4989882 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.64 53.0 4.92e-01 94.9% 80.8%
4960117 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.64 51.0 4.96e-01 88.6% 77.8%
3785896 327.7.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.63 55.0 5.53e-01 97.5% 98.8%
4411671 3261.1.1.2 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › Yop-YscD_ppl_1st 0.62 46.0 4.87e-01 88.6% 96.9%
5054115 316.1.1.2 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.62 53.0 4.85e-01 94.9% 71.4%
1200920 298.1.1.16 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DAPDH_C 0.62 53.0 4.47e-01 94.9% 57.1%
4947673 327.5.1.0 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.62 53.0 4.90e-01 98.7% 86.7%
4934717 316.1.1.27 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.61 52.0 4.57e-01 94.9% 86.7%
4991181 327.11.1.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.61 46.0 4.91e-01 84.8% 100.0%
2636487 327.5.1.2 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.60 50.0 4.70e-01 100.0% 75.8%
4935566 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.59 40.0 3.60e-01 79.7% 48.7%
4043600 327.18.1.0 a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A 0.55 43.0 4.22e-01 84.8% 88.2%
4950484 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.54 43.0 3.48e-01 87.3% 93.8%
3715315 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.54 44.0 3.06e-01 88.6% 46.5%
3966350 327.5.1.0 a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.54 47.0 4.36e-01 100.0% 76.2%
3165868 2003.1.1.46 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.54 44.0 3.42e-01 97.5% 40.6%
4449296 2004.1.1.84 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TsaE 0.53 37.0 3.16e-01 74.7% 68.1%
D2 high residues 103-151
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.73 62.0 4.12e-01 100.0% 59.5%
4v1al00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.71 55.0 4.08e-01 93.9% 32.3%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.71 59.0 4.44e-01 95.9% 65.6%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 55.0 4.84e-01 95.9% 63.7%
3w1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.67 46.0 3.61e-01 73.5% 35.6%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 54.0 4.89e-01 91.8% 65.7%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.66 45.0 4.02e-01 71.4% 53.7%
4at7A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 55.0 3.94e-01 95.9% 65.8%
6l2cB00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.65 53.0 3.17e-01 93.9% 86.0%
1rzmA01 3.30.70.1140 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 0.64 50.0 4.38e-01 91.8% 57.5%
1lfwA03 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 49.0 4.21e-01 91.8% 65.9%
4zm3B01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 49.0 3.73e-01 95.9% 43.0%
3l44A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.62 49.0 3.46e-01 95.9% 33.3%
3ossD00 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.62 47.0 3.41e-01 89.8% 27.4%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.61 51.0 4.18e-01 95.9% 53.1%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.61 44.0 3.92e-01 79.6% 52.1%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 4.02e-01 95.9% 49.4%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.61 48.0 4.29e-01 89.8% 80.6%
2wpvE00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.61 42.0 2.59e-01 71.4% 18.6%
2f1rA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 41.0 3.04e-01 73.5% 92.6%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 3.33e-01 75.5% 66.7%
6nyoA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.60 51.0 3.44e-01 95.9% 64.4%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.60 49.0 4.37e-01 91.8% 64.8%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 3.63e-01 77.6% 45.3%
6n6qD00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.60 49.0 2.92e-01 100.0% 29.3%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.59 51.0 4.02e-01 100.0% 88.3%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.54e-01 77.6% 44.8%
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.59 45.0 3.52e-01 89.8% 36.7%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.58 49.0 3.98e-01 95.9% 52.5%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 44.0 3.66e-01 81.6% 48.3%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.58 45.0 3.72e-01 93.9% 98.1%
4uhiA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.58 47.0 2.83e-01 100.0% 28.7%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.58 46.0 3.92e-01 91.8% 54.0%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.58 48.0 3.96e-01 98.0% 50.0%
3akcA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 48.0 3.25e-01 100.0% 41.8%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.57 41.0 3.28e-01 77.6% 77.2%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 46.0 3.74e-01 91.8% 90.7%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.57 40.0 3.62e-01 75.5% 52.9%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.57 43.0 3.56e-01 89.8% 48.5%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.57 46.0 3.83e-01 93.9% 89.0%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.56 47.0 3.04e-01 93.9% 85.8%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.56 49.0 3.08e-01 100.0% 90.7%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.55 43.0 3.83e-01 91.8% 59.7%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 45.0 3.67e-01 91.8% 89.8%
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.55 40.0 2.81e-01 79.6% 84.8%
7xinA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.55 45.0 3.54e-01 93.9% 88.1%
2kl8A00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 41.0 3.68e-01 93.9% 54.1%
1zcdA00 1.20.1530.10 Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain 0.54 41.0 2.45e-01 81.6% 17.8%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.45e-01 83.7% 51.2%
7npaA02 3.30.70.3340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.58e-01 91.8% 52.9%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 40.0 3.77e-01 89.8% 68.2%
5xyiU00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.53 43.0 3.52e-01 91.8% 77.3%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.29e-01 91.8% 42.9%
4hziB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 45.0 2.93e-01 100.0% 24.9%
1o7fA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 44.0 3.12e-01 95.9% 31.4%
1hywA00 3.30.1580.10 Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W 0.52 36.0 3.46e-01 75.5% 65.5%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 40.0 2.66e-01 91.8% 86.5%
2e55A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 2.86e-01 95.9% 49.0%
4uwmA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.51 42.0 2.59e-01 95.9% 90.1%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 39.0 3.31e-01 89.8% 51.7%
2x49A02 3.40.5.40 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › FHIPEP family, domain 2 0.50 33.0 3.41e-01 71.4% 81.2%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.12e-01 81.6% 66.7%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4360087 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.74 58.0 5.60e-01 87.8% 92.7%
4446761 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.74 62.0 5.98e-01 93.9% 100.0%
3805761 614.1.1.0 alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain 0.73 37.0 3.12e-01 79.6% 33.3%
4124100 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.72 51.0 5.27e-01 75.5% 100.0%
5001157 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.72 60.0 5.06e-01 95.9% 57.6%
5058130 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.70 57.0 5.05e-01 95.9% 61.3%
4670438 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.70 59.0 5.58e-01 93.9% 91.5%
2323881 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.70 58.0 5.65e-01 95.9% 85.2%
4197044 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.69 52.0 5.17e-01 81.6% 98.0%
3289385 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.68 54.0 5.37e-01 87.8% 100.0%
4226064 3433.1.2.0 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain 0.68 57.0 5.93e-01 93.9% 100.0%
5056043 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.67 51.0 4.72e-01 93.9% 64.6%
3962316 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.67 55.0 4.18e-01 93.9% 47.5%
4980798 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.66 51.0 4.58e-01 95.9% 58.7%
5075184 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.66 48.0 3.18e-01 79.6% 93.3%
4616680 7577.1.1.2 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 0.66 47.0 2.80e-01 75.5% 9.9%
4968322 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.64 50.0 4.92e-01 89.8% 83.6%
5029009 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.64 46.0 4.37e-01 91.8% 63.1%
3626792 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.63 52.0 3.05e-01 91.8% 18.5%
4986692 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.63 45.0 3.26e-01 75.5% 87.9%
4392601 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.63 51.0 4.57e-01 91.8% 64.4%
5063713 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.63 46.0 4.41e-01 83.7% 70.0%
5057781 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.62 46.0 3.85e-01 77.6% 48.8%
4779977 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 49.0 4.19e-01 95.9% 52.9%
3737802 3914.1.1.0 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain 0.62 50.0 2.85e-01 93.9% 13.9%
4940513 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.62 45.0 3.65e-01 77.6% 43.3%
4480617 1056.1.1.1 a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD 0.61 54.0 3.62e-01 100.0% 42.1%
3976762 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.61 50.0 4.40e-01 93.9% 62.7%
4177037 327.16.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system 0.60 46.0 4.54e-01 91.8% 80.0%
5045943 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.60 43.0 3.06e-01 75.5% 89.0%
3344229 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.60 42.0 3.93e-01 95.9% 56.9%
4026598 2008.1.1.86 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAP 0.60 44.0 3.37e-01 79.6% 92.2%
4156356 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.60 45.0 3.63e-01 79.6% 43.3%
4946891 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.59 46.0 4.20e-01 89.8% 64.3%
4817370 159.1.2.0 alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related 0.59 48.0 3.47e-01 98.0% 30.0%
3588857 101.1.2.93 alpha arrays › HTH › HTH › winged helix domain › HTH_Mga 0.58 45.0 3.83e-01 93.9% 50.6%
3388102 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 45.0 4.18e-01 91.8% 69.2%
4979123 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.57 47.0 3.17e-01 89.8% 88.9%
4560753 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.57 45.0 3.63e-01 95.9% 55.7%
4968601 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 3.68e-01 91.8% 43.8%
4973244 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.57 47.0 3.25e-01 91.8% 91.4%
3966338 327.16.1.19 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › NRho 0.57 45.0 4.37e-01 89.8% 80.0%
3621974 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.56 44.0 3.93e-01 89.8% 58.7%
3272269 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 45.0 2.92e-01 89.8% 22.3%
5037026 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.56 46.0 3.47e-01 91.8% 91.7%
3850744 263.1.1.0 a+b three layers › SRF-like › SRF-like › SRF-like 0.56 47.0 4.13e-01 91.8% 75.7%
3513071 323.1.1.6 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf 0.55 41.0 2.47e-01 79.6% 17.1%
5065439 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.55 47.0 3.21e-01 93.9% 90.3%
3524888 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.55 42.0 3.87e-01 91.8% 65.7%
3847647 109.4.1.544 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ParcG 0.54 45.0 3.11e-01 95.9% 57.4%
3933566 601.42.1.0 alpha bundles › Four-helical up-and-down bundle › Helical bundle in ROQ domain › Helical bundle in ROQ domain 0.54 47.0 3.24e-01 100.0% 85.1%
4971273 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.54 45.0 3.10e-01 93.9% 91.2%
3682008 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 44.0 3.30e-01 91.8% 46.8%
3387583 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.53 45.0 3.12e-01 93.9% 89.4%
3578641 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.53 40.0 3.72e-01 91.8% 65.7%
3699092 2002.1.1.192 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AMP_deaminase 0.52 43.0 2.39e-01 91.8% 24.8%
4030733 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 42.0 3.34e-01 91.8% 96.2%
3168940 109.4.1.64 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 0.51 40.0 2.54e-01 91.8% 24.8%
3940062 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.51 39.0 2.56e-01 100.0% 58.4%