←Back to structures
MK448720.1__QBX16578.1__Javan261_0018__00018
Bact-VirMK448720.1__QBX16578.1__Javan261_0018__00018
Identity
- Accession:
- MK448720 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-119
Domain cluster:
rep: KU848187.1__ANJ65472.1__PLE2_14__00013__D12-112
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.69 | 28.0 | 3.45e-01 | 100.0% | 57.7% |
| 4akvA02 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.63 | 33.0 | 2.80e-01 | 88.1% | 31.1% |
| 3d8lA00 | 1.10.8.940 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein, phage p2 ORF12 | 0.60 | 43.0 | 4.84e-01 | 74.6% | 96.7% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 44.0 | 4.29e-01 | 87.3% | 96.1% |
| 2lpeA01 | 6.10.140.1120 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 27.0 | 3.24e-01 | 99.2% | 70.5% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.53 | 44.0 | 4.11e-01 | 91.5% | 96.1% |
| 3nhiA01 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.53 | 41.0 | 3.86e-01 | 83.1% | 92.6% |
| 1t95A01 | 3.30.1250.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical 12.0 Kda Protein In Nam8-gar1 Intergenic Region; Chain: A; › Ribosome maturation protein SBDS, N-terminal domain | 0.53 | 34.0 | 3.89e-01 | 83.1% | 95.0% |
| 6fhoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 3.39e-01 | 81.4% | 90.1% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 30.0 | 3.44e-01 | 72.0% | 79.3% |
| 2zuvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 36.0 | 2.65e-01 | 73.7% | 45.6% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 36.0 | 3.37e-01 | 73.7% | 93.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927432 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.68 | 45.0 | 5.23e-01 | 83.9% | 98.8% |
| 3698095 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 35.0 | 4.51e-01 | 91.5% | 100.0% |
| 4109615 | 3193.1.1.1 ↗ | alpha arrays › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related › HopAB effectors Pto-binding domain-related › AvrPtoB_bdg | 0.62 | 43.0 | 3.65e-01 | 91.5% | 44.3% |
| 4872460 | 1140.1.1.1 ↗ | alpha duplicates or obligate multimers › Traversal protein CelTOS › Traversal protein CelTOS › Traversal protein CelTOS › CelTOS | 0.61 | 29.0 | 3.96e-01 | 71.2% | 93.0% |
| 4840 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.53 | 34.0 | 3.23e-01 | 91.5% | 53.6% |
| 3958744 | 604.24.1.1 ↗ | alpha bundles › Spectrin repeat-like › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › Helical bundle domain in putative transcriptional regulator Jann_0659-related proteins › PaaX_C | 0.53 | 31.0 | 3.34e-01 | 82.2% | 67.0% |
| 3232559 | 5001.1.1.60 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srx | 0.51 | 41.0 | 3.22e-01 | 85.6% | 88.5% |