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MK448723.1__QBX16710.1__Javan271_0030__00030
Bact-VirMK448723.1__QBX16710.1__Javan271_0030__00030
Identity
- Accession:
- MK448723 ↗
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-90
Domain cluster:
rep: KP836355.1__AJW76901.1__UF08_12__00012__D16-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13022.13 best | HTH_Tnp_1_2 | 30.7 | 4.70e-07 | 96.5% | 63.1% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ao9I01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.81 | 70.0 | 7.01e-01 | 100.0% | 92.0% |
| 3fm5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.60e-01 | 72.4% | 64.6% |
| 3fxqB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 4.10e-01 | 75.9% | 100.0% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.84e-01 | 81.6% | 73.4% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.99e-01 | 75.9% | 100.0% |
| 2gxgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 41.0 | 3.58e-01 | 80.5% | 70.7% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.54e-01 | 81.6% | 67.1% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 48.0 | 4.54e-01 | 100.0% | 99.0% |
| 2qibB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 45.0 | 3.48e-01 | 95.4% | 82.2% |
| 6pcoC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 40.0 | 3.54e-01 | 80.5% | 75.0% |
| 5fglA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 44.0 | 3.38e-01 | 90.8% | 98.0% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 45.0 | 3.49e-01 | 94.3% | 75.1% |
| 3ppbA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 46.0 | 3.62e-01 | 98.9% | 97.9% |
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 45.0 | 3.54e-01 | 98.9% | 99.5% |
| 3oioA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 46.0 | 4.29e-01 | 100.0% | 93.8% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 44.0 | 3.47e-01 | 95.4% | 48.7% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.41e-01 | 82.8% | 73.8% |
| 3npiB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 46.0 | 3.51e-01 | 100.0% | 91.0% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.58e-01 | 85.1% | 70.8% |
| 4yzrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 45.0 | 2.96e-01 | 98.9% | 44.1% |
| 3gziA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 45.0 | 3.46e-01 | 100.0% | 91.6% |
| 2uxuB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 45.0 | 3.47e-01 | 100.0% | 77.1% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 44.0 | 4.17e-01 | 100.0% | 99.1% |
| 5mi7A03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.51 | 39.0 | 2.86e-01 | 85.1% | 89.0% |
| 1r7jA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.49e-01 | 72.4% | 90.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2550 | 101.1.1.59 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1_2 | 0.85 | 79.0 | 7.08e-01 | 100.0% | 77.8% |
| 5003296 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.69 | 60.0 | 5.55e-01 | 94.3% | 88.2% |
| 3990779 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 48.0 | 4.44e-01 | 73.6% | 58.2% |
| 4950787 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.65 | 44.0 | 4.36e-01 | 71.3% | 93.7% |
| 4968016 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.60 | 41.0 | 3.74e-01 | 70.1% | 63.5% |
| 3971593 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.60 | 40.0 | 4.76e-01 | 94.3% | 100.0% |
| 4009138 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.60 | 40.0 | 4.77e-01 | 89.7% | 100.0% |
| 4664006 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.59 | 41.0 | 4.10e-01 | 71.3% | 95.6% |
| 3970001 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 4.32e-01 | 80.5% | 100.0% |
| 5041390 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.56 | 45.0 | 3.24e-01 | 89.7% | 63.8% |
| 3661584 | 4006.1.1.6 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › DUF3475 | 0.56 | 43.0 | 3.21e-01 | 82.8% | 33.0% |
| 3970403 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 40.0 | 3.97e-01 | 75.9% | 100.0% |
| 4032282 | 101.1.4.29 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF2316 | 0.55 | 32.0 | 3.27e-01 | 89.7% | 58.8% |
| 3946019 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 40.0 | 4.01e-01 | 78.2% | 100.0% |
| 4969257 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.54 | 37.0 | 3.34e-01 | 71.3% | 96.7% |
| 4044121 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.51 | 44.0 | 3.42e-01 | 96.6% | 92.9% |
| 3946548 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.51 | 42.0 | 4.19e-01 | 92.0% | 100.0% |
| 3974691 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 39.0 | 2.83e-01 | 81.6% | 75.4% |
| 3845483 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 37.0 | 2.83e-01 | 78.2% | 94.4% |