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MK448727.1__QBX16878.1__Javan291_0002__00002
Bact-VirMK448727.1__QBX16878.1__Javan291_0002__00002
Identity
- Accession:
- MK448727 ↗
- Kingdom:
- phage
Quality
90.3
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-239
Domain cluster:
rep: KP836356.2__AJW76984.1__UF09_18__00029__D2-85_102-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12686.13 best | DUF3800 | 73.3 | 4.90e-20 | 86.6% | 99.3% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ekeA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.80 | 56.0 | 6.61e-01 | 89.1% | 98.8% |
| 1f21A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 40.0 | 4.93e-01 | 100.0% | 94.7% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 43.0 | 4.84e-01 | 94.5% | 85.1% |
| 2jaxA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.58 | 32.0 | 4.21e-01 | 99.6% | 100.0% |
| 7ec2A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 29.0 | 3.58e-01 | 99.2% | 80.1% |
| 3drnB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 26.0 | 3.25e-01 | 94.5% | 74.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049682 | 2484.1.1.264 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3800 | 0.86 | 74.0 | 7.93e-01 | 100.0% | 99.5% |
| 4950366 | 2484.1.1.264 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3800 | 0.86 | 73.0 | 7.82e-01 | 98.7% | 99.5% |
| 4876204 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.73 | 24.0 | 4.45e-01 | 79.8% | 96.0% |
| 3310760 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.70 | 34.0 | 4.59e-01 | 79.8% | 85.4% |
| 4943926 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 66.0 | 6.45e-01 | 100.0% | 97.2% |
| 4932201 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.53 | 28.0 | 3.65e-01 | 100.0% | 90.8% |
| 4033672 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 29.0 | 3.70e-01 | 100.0% | 92.6% |
| 4997354 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.52 | 31.0 | 3.44e-01 | 94.1% | 70.6% |
| 3697786 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 30.0 | 3.18e-01 | 99.2% | 62.3% |
| 4627625 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.50 | 37.0 | 3.88e-01 | 81.1% | 81.4% |
| 4141337 | 2484.1.1.31 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase | 0.50 | 37.0 | 3.88e-01 | 81.1% | 82.8% |