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MK448730.1__QBX17063.1__Javan311_0030__00018

Bact-Vir

MK448730.1__QBX17063.1__Javan311_0030__00018

Identity

Accession:
MK448730 ↗
Kingdom:
phage

Quality

92.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan311

TaxID: 2548103

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-70
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hm6X01 1.10.506.10 Mainly Alpha › Orthogonal Bundle › GTPase Activation - p120GAP; domain 1 › GTPase Activation - p120gap; domain 1 0.65 47.0 2.85e-01 79.6% 23.3%
6qv3A05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.60e-01 75.9% 62.4%
1z1nX02 3.90.10.10 Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 0.59 38.0 2.98e-01 90.7% 29.9%
2yfvC00 6.10.250.2010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.57 35.0 3.36e-01 77.8% 55.0%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 4.22e-01 92.6% 97.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4022653 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.70 53.0 4.29e-01 88.9% 41.9%
4012859 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 3.74e-01 74.1% 40.0%
5061575 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 48.0 3.91e-01 75.9% 41.0%
3582740 5001.1.1.7 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Frizzled 0.63 45.0 3.01e-01 77.8% 40.0%
3518542 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.58 44.0 3.10e-01 83.3% 56.7%
4014086 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 46.0 2.87e-01 90.7% 72.2%
5015083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 49.0 4.29e-01 98.1% 86.3%
3357520 310.2.1.28 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 0.53 37.0 3.28e-01 74.1% 78.8%
3478717 101.1.2.392 ↗ alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.53 46.0 3.60e-01 96.3% 80.0%
4015273 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.53 39.0 3.24e-01 79.6% 48.4%
3725940 101.1.15.0 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.52 38.0 3.31e-01 79.6% 54.1%