Back to structures

MK448731.1__QBX17088.1__Javan33_0008__00008

Bact-Vir

MK448731.1__QBX17088.1__Javan33_0008__00008

Identity

Accession:
MK448731 ↗
Kingdom:
phage

Quality

82.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-79
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 60.0 4.77e-01 77.5% 37.9%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 61.0 4.90e-01 78.9% 40.3%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 59.0 4.78e-01 77.5% 40.3%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 62.0 6.27e-01 83.1% 75.7%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 57.0 6.66e-01 73.2% 94.2%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 58.0 4.63e-01 76.1% 38.5%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 56.0 5.13e-01 77.5% 53.9%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 61.0 4.74e-01 78.9% 37.9%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 58.0 5.25e-01 83.1% 54.8%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 56.0 4.49e-01 77.5% 37.3%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 6.78e-01 100.0% 89.6%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 6.31e-01 83.1% 88.3%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 58.0 5.44e-01 83.1% 61.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 58.0 5.65e-01 83.1% 67.9%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 5.96e-01 81.7% 75.0%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.09e-01 81.7% 52.5%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 6.02e-01 83.1% 82.8%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 51.0 5.81e-01 70.4% 88.5%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.72e-01 78.9% 72.6%
4mqvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 59.0 6.13e-01 78.9% 84.6%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 50.0 5.64e-01 71.8% 85.2%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 5.35e-01 78.9% 61.8%
2xubA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 47.0 4.90e-01 71.8% 64.2%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 5.47e-01 83.1% 64.4%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 6.10e-01 84.5% 84.5%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 5.67e-01 78.9% 85.2%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 5.50e-01 78.9% 80.0%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 4.96e-01 76.1% 64.1%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 5.39e-01 78.9% 81.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 56.0 4.72e-01 88.7% 47.5%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 55.0 5.18e-01 77.5% 78.6%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 4.90e-01 77.5% 63.0%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 4.64e-01 84.5% 48.2%
1mgtA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.52e-01 83.1% 72.8%
3frwB00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.74 46.0 4.16e-01 70.4% 46.9%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.11e-01 77.5% 81.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 53.0 4.78e-01 76.1% 98.9%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 52.0 4.63e-01 76.1% 52.4%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.44e-01 78.9% 88.3%
2pjpA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 5.42e-01 78.9% 86.9%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.24e-01 78.9% 76.6%
7dg2C01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.72 56.0 5.51e-01 83.1% 82.7%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.59e-01 77.5% 57.3%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 4.89e-01 84.5% 63.7%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 50.0 4.32e-01 74.6% 61.3%
2itbB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.63 42.0 3.07e-01 70.4% 40.4%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 47.0 4.41e-01 83.1% 82.4%
3jsjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 45.0 3.36e-01 77.5% 57.4%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.56 41.0 3.95e-01 78.9% 67.9%
1xl3C00 1.20.1280.80 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.55 40.0 3.77e-01 78.9% 79.1%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5036798 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 63.0 7.17e-01 77.5% 92.7%
4979740 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.90 59.0 6.19e-01 73.2% 73.8%
4979728 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 59.0 5.48e-01 73.2% 56.5%
4944620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.89 58.0 6.59e-01 73.2% 87.3%
5077992 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 57.0 5.66e-01 73.2% 64.0%
4984666 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 57.0 5.63e-01 73.2% 64.0%
4962128 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 57.0 5.79e-01 73.2% 68.6%
5030106 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.86 57.0 6.37e-01 73.2% 87.3%
4192837 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.86 57.0 6.38e-01 73.2% 87.3%
4956784 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.86 57.0 5.83e-01 73.2% 70.0%
5032601 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.86 57.0 6.48e-01 73.2% 89.1%
5032612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 56.0 6.32e-01 71.8% 87.3%
3282258 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 56.0 5.69e-01 73.2% 68.6%
4375394 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.85 59.0 6.36e-01 83.1% 85.0%
3992134 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.85 61.0 6.38e-01 78.9% 81.5%
5037302 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 55.0 5.99e-01 73.2% 80.0%
5030108 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 56.0 6.35e-01 73.2% 89.1%
5083541 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 64.0 6.67e-01 80.3% 90.8%
4947697 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 56.0 6.07e-01 76.1% 81.7%
5046761 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 55.0 5.96e-01 73.2% 80.0%
3981636 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 59.0 5.65e-01 78.9% 65.0%
4982117 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 59.0 5.79e-01 73.2% 70.7%
4931184 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.83 55.0 6.14e-01 71.8% 87.3%
4259069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 63.0 4.40e-01 78.9% 29.0%
4967948 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 63.0 6.59e-01 80.3% 90.8%
5075437 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.83 57.0 5.76e-01 76.1% 71.4%
4895784 101.1.2.623 alpha arrays › HTH › HTH › winged helix domain › PF25983 0.83 59.0 6.14e-01 83.1% 79.1%
4945902 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 60.0 6.71e-01 76.1% 96.4%
4943799 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 55.0 6.43e-01 73.2% 98.0%
5007105 101.1.2.674 alpha arrays › HTH › HTH › winged helix domain › PF29648 0.83 56.0 6.32e-01 83.1% 90.9%
5074054 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.83 57.0 6.44e-01 73.2% 92.7%
4966151 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.83 55.0 5.44e-01 73.2% 65.3%
4954539 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 52.0 6.04e-01 73.2% 92.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 57.0 6.21e-01 83.1% 86.7%
5048389 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 58.0 6.27e-01 78.9% 88.1%
4033964 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 61.0 5.73e-01 78.9% 65.9%
5025290 101.1.2.652 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C 0.81 60.0 4.82e-01 78.9% 42.3%
4968115 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 53.0 5.38e-01 73.2% 68.6%
3262224 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.81 58.0 5.85e-01 80.3% 75.7%
4954772 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 56.0 6.27e-01 74.6% 94.5%
3597916 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 57.0 4.62e-01 78.9% 41.6%
4096608 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 61.0 5.54e-01 83.1% 61.1%
4952959 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 52.0 5.31e-01 76.1% 68.6%
4643436 101.1.2.304 alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.80 60.0 5.25e-01 83.1% 56.0%
3232041 101.1.2.304 alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.79 60.0 6.04e-01 83.1% 80.0%
3735508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 57.0 4.69e-01 78.9% 43.2%
5001507 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 57.0 4.90e-01 78.9% 49.1%
5019840 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.79 56.0 5.05e-01 76.1% 55.8%
3942897 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 61.0 5.83e-01 84.5% 72.5%
4971366 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 52.0 5.11e-01 73.2% 64.0%
4957813 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 52.0 5.48e-01 73.2% 75.4%
4055578 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 63.0 4.95e-01 88.7% 43.6%
4990436 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.78 58.0 5.72e-01 80.3% 74.7%
5037969 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 5.37e-01 83.1% 65.9%
3971374 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.76 54.0 5.68e-01 76.1% 81.5%
1316682 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.76 54.0 5.77e-01 76.1% 86.9%
3738604 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 53.0 4.61e-01 78.9% 50.5%
5077788 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 50.0 4.70e-01 77.5% 58.8%
4960424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.88e-01 84.5% 90.8%
3413924 101.1.2.45 alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP 0.73 51.0 4.57e-01 78.9% 52.0%
4928807 101.1.2.233 alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.73 52.0 5.26e-01 76.1% 75.7%
3786594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 47.0 4.35e-01 70.4% 52.2%
3230676 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 4.41e-01 78.9% 47.0%
4829296 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.71 50.0 4.28e-01 77.5% 46.4%
4524717 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.71 53.0 4.71e-01 78.9% 56.0%
3255880 101.1.2.511 alpha arrays › HTH › HTH › winged helix domain › PCI, PF26569 0.71 53.0 4.55e-01 78.9% 51.8%
3685184 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.71 53.0 4.48e-01 78.9% 49.6%
3946871 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 49.0 5.02e-01 83.1% 82.9%
5000678 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.66 48.0 4.26e-01 76.1% 59.0%
4461201 101.19.1.1 alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.61 43.0 4.20e-01 78.9% 66.3%
5079049 4163.1.1.0 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.53 44.0 3.90e-01 97.2% 100.0%
3212718 1075.1.1.4 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 0.53 41.0 2.78e-01 88.7% 75.9%