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MK448739.1__QBX17534.1__Javan363_0043__00002
Bact-VirMK448739.1__QBX17534.1__Javan363_0043__00002
Identity
- Accession:
- MK448739 ↗
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-93
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3buxB01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.65 | 53.0 | 4.50e-01 | 89.7% | 90.7% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 48.0 | 4.56e-01 | 80.8% | 78.3% |
| 3i1aA03 | 1.20.58.840 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 48.0 | 4.28e-01 | 85.9% | 92.2% |
| 1eq1A00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.59 | 47.0 | 3.71e-01 | 87.2% | 92.2% |
| 3b0xA01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.58 | 41.0 | 3.97e-01 | 73.1% | 88.5% |
| 2vsgA01 | 3.90.150.10 | Alpha Beta › Alpha-Beta Complex › Variant Surface Glycoprotein; Chain A domain 1 › Variant Surface Glycoprotein, subunit A domain 1 | 0.58 | 42.0 | 3.12e-01 | 75.6% | 59.1% |
| 3rbtA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 40.0 | 3.49e-01 | 73.1% | 47.9% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 48.0 | 4.01e-01 | 97.4% | 82.8% |
| 1fouA01 | 1.10.246.30 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.57 | 45.0 | 4.60e-01 | 88.5% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3421834 | 3755.4.1.17 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N | 0.70 | 56.0 | 4.68e-01 | 87.2% | 65.2% |
| 5046555 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.63 | 48.0 | 3.83e-01 | 82.1% | 69.0% |
| 5000788 | 5060.1.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C | 0.58 | 51.0 | 4.64e-01 | 97.4% | 86.7% |
| 3303117 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.57 | 49.0 | 4.79e-01 | 93.6% | 95.3% |
| 3573605 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.53e-01 | 100.0% | 52.0% |