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MK448747.1__QBX17956.1__Javan385_0053__00004
Bact-VirMK448747.1__QBX17956.1__Javan385_0053__00004
Identity
- Accession:
- MK448747 ↗
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Taxonomy
TaxID: 2548141
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-56
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 55.0 | 4.44e-01 | 100.0% | 74.8% |
| 7t4dA01 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.62 | 55.0 | 3.44e-01 | 100.0% | 75.7% |
| 2muoA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 38.0 | 3.38e-01 | 70.4% | 72.0% |
| 1f2nC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 3.17e-01 | 98.1% | 53.8% |
| 4m00A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 49.0 | 4.19e-01 | 100.0% | 69.8% |
| 4pj2A00 | 2.40.128.460 | Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme | 0.52 | 43.0 | 3.31e-01 | 100.0% | 40.5% |
| 5iryA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.50 | 43.0 | 3.76e-01 | 100.0% | 82.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3576134 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 56.0 | 5.82e-01 | 98.1% | 86.0% |
| 3419852 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.73 | 61.0 | 5.34e-01 | 100.0% | 63.3% |
| 3579531 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.62 | 52.0 | 4.55e-01 | 98.1% | 61.2% |
| 5059870 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.61 | 54.0 | 4.21e-01 | 100.0% | 68.7% |
| 3419015 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 43.0 | 4.49e-01 | 75.9% | 94.0% |
| 3328882 | 10.9.1.1 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV | 0.61 | 50.0 | 4.10e-01 | 98.1% | 54.5% |
| 5068820 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 4.26e-01 | 87.0% | 73.3% |
| 3314896 | 3156.1.1.4 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase | 0.58 | 49.0 | 3.98e-01 | 100.0% | 66.4% |
| 5081128 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.56 | 45.0 | 3.11e-01 | 98.1% | 88.9% |
| 3772162 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 42.0 | 3.30e-01 | 88.9% | 52.8% |
| 3691832 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.54 | 38.0 | 2.49e-01 | 77.8% | 22.2% |
| 4022429 | 1020.1.1.2 ↗ | extended segments › Ezh2 N-terminal domain › Ezh2 N-terminal domain › Ezh2 N-terminal domain › EZH2_N | 0.53 | 38.0 | 2.80e-01 | 75.9% | 31.4% |
| 3478271 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.52 | 35.0 | 3.33e-01 | 70.4% | 90.8% |
| 4012512 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 38.0 | 2.38e-01 | 87.0% | 48.7% |
| 3545017 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 41.0 | 2.47e-01 | 100.0% | 17.2% |
| 3642333 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 42.0 | 3.01e-01 | 98.1% | 64.6% |