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MK448748.1__QBX18006.1__Javan389_0047__00047
Bact-VirMK448748.1__QBX18006.1__Javan389_0047__00047
Identity
- Accession:
- MK448748 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Taxonomy
TaxID: 2548143
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-68
Domain cluster:
rep: KY472224.1__AQT27701.1__EFP10_66__00066__D2-54
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.68 | 45.0 | 4.14e-01 | 100.0% | 52.2% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 42.0 | 3.95e-01 | 100.0% | 58.3% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 39.0 | 3.49e-01 | 100.0% | 46.8% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 42.0 | 3.72e-01 | 74.6% | 98.0% |
| 2euiA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 43.0 | 3.51e-01 | 82.1% | 75.0% |
| 3d3bJ00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.58 | 41.0 | 3.79e-01 | 100.0% | 57.5% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 3.57e-01 | 100.0% | 51.6% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 39.0 | 3.07e-01 | 100.0% | 33.1% |
| 1yk9A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.57 | 43.0 | 3.21e-01 | 83.6% | 92.9% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 3.46e-01 | 100.0% | 50.0% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.55 | 36.0 | 3.86e-01 | 79.1% | 78.9% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 41.0 | 3.32e-01 | 100.0% | 39.9% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 32.0 | 3.42e-01 | 98.5% | 67.9% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 37.0 | 3.12e-01 | 74.6% | 87.8% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 3.13e-01 | 88.1% | 89.4% |
| 4k3cA01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.52 | 36.0 | 3.48e-01 | 76.1% | 91.5% |
| 3bwnD01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 3.33e-01 | 94.0% | 84.0% |
| 2g2sA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.51 | 35.0 | 3.57e-01 | 77.6% | 75.0% |
| 6zwwC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 39.0 | 3.05e-01 | 91.0% | 90.2% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 39.0 | 3.44e-01 | 100.0% | 55.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044501 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 42.0 | 3.59e-01 | 74.6% | 70.0% |
| 4070516 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 44.0 | 4.26e-01 | 100.0% | 71.2% |
| 4985406 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.56 | 42.0 | 4.00e-01 | 100.0% | 69.6% |
| 3273838 | 2006.1.1.35 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Pex22_HAD-like | 0.55 | 38.0 | 3.10e-01 | 71.6% | 62.2% |
| 4797813 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.55 | 36.0 | 3.86e-01 | 79.1% | 78.9% |
| 4899007 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.55 | 34.0 | 3.40e-01 | 73.1% | 58.3% |
| 3701672 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.55 | 38.0 | 2.89e-01 | 73.1% | 100.0% |
| 4898997 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.55 | 35.0 | 3.50e-01 | 77.6% | 61.1% |
| 3289101 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.54 | 35.0 | 3.76e-01 | 100.0% | 86.0% |
| None | — | 0.53 | 37.0 | 2.32e-01 | 73.1% | 89.8% | |
| 1144777 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.53 | 39.0 | 3.40e-01 | 79.1% | 70.2% |
| 3621671 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 43.0 | 2.81e-01 | 95.5% | 81.6% |
| 3839142 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.53 | 38.0 | 3.50e-01 | 77.6% | 96.7% |
| 4978692 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.53 | 38.0 | 2.52e-01 | 79.1% | 22.6% |
| 3356712 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 32.0 | 3.66e-01 | 86.6% | 95.6% |
| 4886985 | 7523.1.1.16 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › DctP | 0.51 | 33.0 | 2.81e-01 | 73.1% | 36.0% |