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MK448750.1__QBX18085.1__Javan393_0005__00056
Bact-VirMK448750.1__QBX18085.1__Javan393_0005__00056
Identity
- Accession:
- MK448750 ↗
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-106
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07104.17 best | DUF1366 | 39.0 | 8.00e-10 | 91.3% | 63.2% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.70 | 48.0 | 3.10e-01 | 71.2% | 31.5% |
| 3fewX02 | 3.30.1310.40 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › | 0.57 | 31.0 | 3.22e-01 | 80.8% | 55.8% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 45.0 | 3.65e-01 | 86.5% | 80.2% |
| 4mt4A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 49.0 | 3.18e-01 | 99.0% | 65.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969662 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.65 | 46.0 | 3.01e-01 | 90.4% | 19.2% |
| 3867539 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.59 | 47.0 | 3.59e-01 | 83.7% | 74.3% |
| 3749631 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.59 | 30.0 | 3.05e-01 | 75.0% | 47.6% |
| 3838901 | 5085.1.1.0 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.57 | 52.0 | 3.47e-01 | 98.1% | 78.7% |
| 3863714 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 52.0 | 3.91e-01 | 100.0% | 86.3% |
| 3935357 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 41.0 | 3.96e-01 | 79.8% | 93.3% |
| 3271880 | 223.2.1.23 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 | 0.54 | 39.0 | 3.18e-01 | 76.0% | 51.1% |
| 3838810 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.53 | 47.0 | 3.18e-01 | 98.1% | 77.1% |
| 5050683 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 35.0 | 3.33e-01 | 71.2% | 71.2% |
| 4521994 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.50 | 44.0 | 3.00e-01 | 97.1% | 77.1% |
| 3992826 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.50 | 43.0 | 2.90e-01 | 94.2% | 61.3% |