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MK448760.1__QBX18708.1__Javan443_0034__00034
Bact-VirMK448760.1__QBX18708.1__Javan443_0034__00034
Identity
- Accession:
- MK448760 ↗
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 55-120
Domain cluster:
rep: NC_071083.1__YP_010683437.1__PQF09_gp43__00043__D43-108
D2
high
residues 124-191
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07852.17 best | DUF1642 | 39.3 | 1.20e-09 | 100.0% | 48.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 47.0 | 3.60e-01 | 92.6% | 61.3% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 35.0 | 3.72e-01 | 100.0% | 70.5% |
| 2nutB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.56 | 48.0 | 3.35e-01 | 98.5% | 39.4% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.54 | 43.0 | 3.48e-01 | 92.6% | 60.0% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 42.0 | 3.28e-01 | 92.6% | 91.1% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 3.59e-01 | 89.7% | 83.2% |
| 4bq6F00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.52 | 41.0 | 3.31e-01 | 91.2% | 93.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4632710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 4.28e-01 | 94.1% | 100.0% |
| None | — | 0.54 | 41.0 | 3.10e-01 | 83.8% | 86.3% | |
| 4986681 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.54 | 37.0 | 2.91e-01 | 73.5% | 86.5% |
| 3996907 | 2.1.1.27 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rpb8 | 0.53 | 35.0 | 2.92e-01 | 70.6% | 35.7% |
| 3246514 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.52 | 41.0 | 2.93e-01 | 89.7% | 99.6% |
| 4965423 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.51 | 32.0 | 2.72e-01 | 75.0% | 34.4% |
| 3924099 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 41.0 | 2.95e-01 | 95.6% | 31.5% |
| 4947393 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.51 | 42.0 | 3.64e-01 | 98.5% | 60.9% |
| 5056353 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 43.0 | 2.99e-01 | 100.0% | 36.5% |
| 3952658 | 2484.1.1.113 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family2 | 0.50 | 40.0 | 3.40e-01 | 92.6% | 98.4% |