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MK448760.1__QBX18733.1__Javan443_0059__00059
Bact-VirMK448760.1__QBX18733.1__Javan443_0059__00059
Identity
- Accession:
- MK448760 ↗
- Kingdom:
- phage
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 361-459
Domain cluster:
rep: EF583821.1__ABS83757.1__0305phi8-36p199__00100__D311-389
D2
medium
residues 1-91
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.75 | 65.0 | 5.16e-01 | 96.7% | 48.6% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.71 | 50.0 | 4.99e-01 | 98.9% | 72.0% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 45.0 | 4.48e-01 | 72.5% | 61.5% |
| 4cvuA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 51.0 | 4.61e-01 | 74.7% | 63.9% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.70 | 35.0 | 4.29e-01 | 79.1% | 74.6% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 46.0 | 4.44e-01 | 79.1% | 59.4% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 43.0 | 4.32e-01 | 70.3% | 64.4% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 54.0 | 5.04e-01 | 98.9% | 70.3% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 59.0 | 4.89e-01 | 98.9% | 75.2% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.66 | 59.0 | 5.39e-01 | 98.9% | 89.9% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 47.0 | 4.85e-01 | 89.0% | 79.3% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 59.0 | 4.89e-01 | 98.9% | 74.8% |
| 4l82A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 58.0 | 4.84e-01 | 98.9% | 75.6% |
| 8ct0B01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 57.0 | 4.71e-01 | 98.9% | 72.9% |
| 2r0xA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 58.0 | 4.82e-01 | 98.9% | 76.3% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 46.0 | 4.39e-01 | 73.6% | 68.3% |
| 5choF00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 57.0 | 4.76e-01 | 98.9% | 76.2% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 57.0 | 4.75e-01 | 98.9% | 72.7% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 42.0 | 4.32e-01 | 73.6% | 69.3% |
| 2ecuA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 57.0 | 4.85e-01 | 98.9% | 73.8% |
| 4f07E00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 57.0 | 4.87e-01 | 98.9% | 76.5% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 56.0 | 4.56e-01 | 98.9% | 67.4% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 57.0 | 4.79e-01 | 98.9% | 75.7% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 57.0 | 4.68e-01 | 98.9% | 73.8% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 43.0 | 4.26e-01 | 74.7% | 66.0% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 56.0 | 4.69e-01 | 98.9% | 75.6% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 56.0 | 4.64e-01 | 98.9% | 76.4% |
| 3bnkA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 57.0 | 4.47e-01 | 98.9% | 65.1% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 50.0 | 4.85e-01 | 97.8% | 76.5% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 56.0 | 4.50e-01 | 98.9% | 65.4% |
| 2mklC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 45.0 | 4.28e-01 | 73.6% | 66.7% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.63 | 44.0 | 3.85e-01 | 72.5% | 71.1% |
| 5e4eC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 44.0 | 4.26e-01 | 75.8% | 65.3% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.62 | 56.0 | 5.31e-01 | 100.0% | 91.7% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.62 | 53.0 | 4.12e-01 | 93.4% | 42.9% |
| 5f7uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 4.12e-01 | 73.6% | 72.1% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 52.0 | 4.73e-01 | 98.9% | 69.7% |
| 1hxmB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 4.31e-01 | 78.0% | 66.7% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 42.0 | 3.51e-01 | 71.4% | 79.1% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.08e-01 | 72.5% | 67.0% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.01e-01 | 71.4% | 69.0% |
| 3qfgA00 | 2.60.40.1240 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 45.0 | 3.95e-01 | 84.6% | 75.2% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 4.07e-01 | 82.4% | 61.2% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 38.0 | 4.27e-01 | 94.5% | 87.0% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 42.0 | 3.87e-01 | 93.4% | 58.2% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 43.0 | 3.91e-01 | 85.7% | 59.0% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 4.36e-01 | 82.4% | 82.8% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.57 | 40.0 | 4.06e-01 | 84.6% | 73.0% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 4.17e-01 | 97.8% | 66.4% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 40.0 | 3.99e-01 | 82.4% | 69.8% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.56 | 47.0 | 4.51e-01 | 92.3% | 92.5% |
| 2bujB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 40.0 | 4.00e-01 | 80.2% | 74.5% |
| 1x8bA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 39.0 | 4.09e-01 | 80.2% | 82.1% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 41.0 | 3.52e-01 | 82.4% | 83.6% |
| 1bxgA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.53 | 41.0 | 3.58e-01 | 100.0% | 55.6% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 40.0 | 3.83e-01 | 93.4% | 70.8% |
| 3qz4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 44.0 | 3.12e-01 | 95.6% | 45.1% |
| 7bj4A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 43.0 | 2.94e-01 | 96.7% | 97.7% |
| 2e3nA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 37.0 | 2.78e-01 | 75.8% | 64.9% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 43.0 | 3.03e-01 | 95.6% | 48.0% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 37.0 | 3.31e-01 | 75.8% | 63.8% |
| 1st8A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 43.0 | 2.96e-01 | 96.7% | 43.8% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033712 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 74.0 | 7.65e-01 | 93.4% | 100.0% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.77 | 68.0 | 7.10e-01 | 93.4% | 100.0% |
| 3511361 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 55.0 | 6.15e-01 | 73.6% | 100.0% |
| 5001586 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 51.0 | 5.17e-01 | 95.6% | 71.1% |
| 3963092 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 56.0 | 5.52e-01 | 98.9% | 75.8% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.74 | 52.0 | 5.19e-01 | 74.7% | 70.5% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 52.0 | 5.27e-01 | 95.6% | 74.4% |
| 4970307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.73 | 52.0 | 4.83e-01 | 74.7% | 69.6% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.71 | 53.0 | 4.69e-01 | 76.9% | 62.4% |
| 4214150 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.71 | 53.0 | 4.98e-01 | 98.9% | 65.5% |
| 5059044 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 51.0 | 5.03e-01 | 74.7% | 71.6% |
| 3947980 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.70 | 51.0 | 5.01e-01 | 98.9% | 70.0% |
| 3256332 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.70 | 51.0 | 4.55e-01 | 75.8% | 60.8% |
| 3264338 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 48.0 | 4.88e-01 | 74.7% | 72.2% |
| 4172447 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 45.0 | 4.84e-01 | 75.8% | 85.3% |
| 3397229 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.65 | 52.0 | 3.85e-01 | 96.7% | 33.9% |
| 3256728 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.65 | 53.0 | 4.55e-01 | 87.9% | 66.9% |
| 4944974 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 46.0 | 4.44e-01 | 74.7% | 66.7% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.65 | 52.0 | 4.99e-01 | 86.8% | 81.0% |
| 3525543 | 11.1.1.991 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28112 | 0.65 | 44.0 | 4.19e-01 | 75.8% | 59.1% |
| 3259959 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 45.0 | 4.38e-01 | 80.2% | 66.0% |
| 3550747 | 11.1.1.189 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTCRA | 0.64 | 45.0 | 4.35e-01 | 73.6% | 67.6% |
| 4246480 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 48.0 | 4.79e-01 | 98.9% | 77.9% |
| 4105189 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 48.0 | 4.75e-01 | 98.9% | 76.8% |
| 5035837 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.64 | 44.0 | 3.97e-01 | 71.4% | 84.8% |
| 4953657 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 45.0 | 4.50e-01 | 83.5% | 72.6% |
| 4457262 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 50.0 | 4.76e-01 | 98.9% | 72.7% |
| 3970225 | 1.1.13.68 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27125 | 0.63 | 49.0 | 4.99e-01 | 97.8% | 85.6% |
| 3858089 | 11.1.1.991 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28112 | 0.63 | 43.0 | 4.16e-01 | 75.8% | 61.9% |
| 3249113 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.62 | 44.0 | 4.43e-01 | 76.9% | 72.6% |
| 3494442 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 44.0 | 3.85e-01 | 74.7% | 50.4% |
| 3808070 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.61 | 42.0 | 3.78e-01 | 72.5% | 72.3% |
| 4185030 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 42.0 | 4.15e-01 | 84.6% | 67.4% |
| 3224730 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 51.0 | 4.80e-01 | 91.2% | 80.0% |
| 4391995 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 42.0 | 4.36e-01 | 85.7% | 77.6% |
| 3885324 | 11.1.1.260 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG_2 | 0.61 | 43.0 | 4.14e-01 | 74.7% | 66.7% |
| 408353 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.60 | 42.0 | 3.52e-01 | 71.4% | 79.6% |
| 4682440 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.60 | 41.0 | 4.12e-01 | 84.6% | 68.4% |
| 4967007 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 4.48e-01 | 83.5% | 81.2% |
| 4556105 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.59 | 42.0 | 4.23e-01 | 72.5% | 88.9% |
| 3997045 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 42.0 | 4.17e-01 | 81.3% | 70.5% |
| 4138546 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.59 | 41.0 | 4.12e-01 | 84.6% | 72.2% |
| 4510320 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 39.0 | 4.02e-01 | 75.8% | 71.1% |
| 5058907 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 48.0 | 4.44e-01 | 97.8% | 71.3% |
| 3217257 | 11.1.1.955 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th | 0.57 | 40.0 | 3.95e-01 | 82.4% | 67.0% |
| 3501494 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 3.73e-01 | 76.9% | 68.8% |
| 4163756 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.56 | 40.0 | 3.99e-01 | 95.6% | 71.6% |
| 4056691 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.56 | 42.0 | 3.81e-01 | 78.0% | 75.0% |
| 5030328 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 3.91e-01 | 79.1% | 68.0% |
| 3717759 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 41.0 | 3.70e-01 | 100.0% | 56.0% |
| 4221191 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.56 | 41.0 | 4.07e-01 | 78.0% | 89.5% |
| 3256016 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 3.98e-01 | 74.7% | 74.4% |
| 3990209 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 39.0 | 3.88e-01 | 74.7% | 69.7% |
| 3935249 | 11.1.1.955 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th | 0.55 | 39.0 | 3.85e-01 | 75.8% | 68.0% |
| 3198907 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 4.14e-01 | 78.0% | 85.9% |
| 3944524 | 295.1.1.26 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › BssS | 0.55 | 29.0 | 3.26e-01 | 83.5% | 64.3% |
| 3638266 | 11.1.1.554 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PhoD_2 | 0.55 | 40.0 | 3.94e-01 | 78.0% | 73.0% |
| 3782947 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.55 | 45.0 | 4.06e-01 | 86.8% | 84.2% |
| 4990492 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 30.0 | 3.73e-01 | 93.4% | 100.0% |
| 3699810 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 44.0 | 4.03e-01 | 96.7% | 70.0% |
| 3264530 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 45.0 | 3.63e-01 | 97.8% | 49.7% |
| 5034906 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.51 | 46.0 | 3.83e-01 | 97.8% | 86.9% |
| None | — | 0.51 | 39.0 | 3.64e-01 | 84.6% | 90.8% | |
| 2841931 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.50 | 37.0 | 3.17e-01 | 75.8% | 55.9% |
D3
medium
residues 92-183
Domain cluster:
rep: NC_055031.1__YP_010082455.1__KMD20_gp20__00020__D105-176
D4
medium
residues 184-207_301-344
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3syyA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.61 | 50.0 | 3.69e-01 | 92.6% | 42.8% |
| 2kksA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 46.0 | 3.60e-01 | 85.3% | 62.3% |
| 6gszA05 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.53 | 41.0 | 3.84e-01 | 82.4% | 85.4% |
| 4lsdF00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.48e-01 | 80.9% | 58.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5082946 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 50.0 | 4.66e-01 | 98.5% | 97.6% |
| 5032490 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 47.0 | 3.36e-01 | 100.0% | 48.8% |
| 1734841 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 39.0 | 2.87e-01 | 79.4% | 74.5% |
| 3596043 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.51 | 40.0 | 3.03e-01 | 86.8% | 49.4% |
| 5071475 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.50 | 39.0 | 3.45e-01 | 85.3% | 62.0% |
D5
medium
residues 208-300_345-358
Domain cluster:
rep: MF580769.1__ATI19857.1__L5A1_015__00015__D229-316
D6
medium
residues 467-526
D7
medium
residues 812-892_911-948_971-987
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3km5A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 61.0 | 5.50e-01 | 100.0% | 96.1% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 60.0 | 5.68e-01 | 100.0% | 91.3% |
| 1gwmA00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.61 | 51.0 | 4.97e-01 | 100.0% | 80.4% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 54.0 | 5.19e-01 | 100.0% | 91.0% |
| 4qpwA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 53.0 | 5.29e-01 | 100.0% | 93.0% |
| 1wkyA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.58 | 54.0 | 5.30e-01 | 100.0% | 96.5% |
| 2zxqA04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 53.0 | 5.05e-01 | 100.0% | 92.5% |
| 3f95B00 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.57 | 52.0 | 4.80e-01 | 100.0% | 89.0% |
| 6orhA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 42.0 | 4.46e-01 | 77.2% | 98.3% |
| 2yyoA00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.55 | 41.0 | 3.88e-01 | 77.2% | 95.6% |
| 4cuaA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 49.0 | 4.50e-01 | 100.0% | 97.8% |
| 4yrdA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 39.0 | 4.12e-01 | 85.3% | 85.7% |
| 5jouA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 32.0 | 3.92e-01 | 83.1% | 100.0% |
| 2oyzA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 35.0 | 3.98e-01 | 84.6% | 95.7% |
| 2yfuA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 4.61e-01 | 100.0% | 93.6% |
| 5i0fB04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 32.0 | 3.83e-01 | 89.0% | 96.4% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 4.34e-01 | 100.0% | 83.1% |
| 3gzaB02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 35.0 | 4.00e-01 | 95.6% | 94.9% |
| 3al5B01 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.51 | 46.0 | 3.72e-01 | 100.0% | 85.2% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 38.0 | 4.05e-01 | 98.5% | 90.6% |
| 6fxrA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 41.0 | 3.56e-01 | 86.8% | 70.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4054625 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 57.0 | 5.30e-01 | 100.0% | 87.1% |
| 3949369 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 56.0 | 5.08e-01 | 100.0% | 83.8% |
| 3513695 | 10.1.1.10 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM | 0.61 | 56.0 | 4.94e-01 | 100.0% | 81.0% |
| 1152 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.61 | 51.0 | 4.97e-01 | 100.0% | 80.4% |
| 4001279 | 10.32.1.230 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N | 0.60 | 39.0 | 4.56e-01 | 97.8% | 92.6% |
| 5041163 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 39.0 | 4.41e-01 | 98.5% | 91.4% |
| 5045152 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 47.0 | 4.85e-01 | 100.0% | 95.2% |
| 3894892 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.56 | 38.0 | 4.18e-01 | 93.4% | 84.5% |
| 4031118 | 10.12.1.100 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Polysacc_synt_C | 0.54 | 39.0 | 4.12e-01 | 85.3% | 84.9% |
| 2982467 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.54 | 46.0 | 4.69e-01 | 100.0% | 94.1% |
| 4431954 | 10.12.1.44 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Ofd1_CTDD | 0.53 | 47.0 | 3.76e-01 | 98.5% | 94.0% |
| 3226028 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.51 | 36.0 | 3.91e-01 | 99.3% | 87.0% |
| 5025925 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 44.0 | 4.13e-01 | 97.1% | 95.3% |
D8
medium
residues 1116-1308