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MK448761.1__QBX18756.1__Javan445_0016__00051
Bact-VirMK448761.1__QBX18756.1__Javan445_0016__00051
Identity
- Accession:
- MK448761 ↗
- Kingdom:
- phage
Quality
90.3
mean pLDDT
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-95
Domain cluster:
rep: NC_019502.1__YP_007004366.1__F393_gp19__00035__D5-88
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05135.20 best | Phage_connect_1 | 22.1 | 2.20e-04 | 97.8% | 97.0% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jvoA00 | 1.10.3230.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein | 0.80 | 75.0 | 7.40e-01 | 100.0% | 95.8% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 40.0 | 4.31e-01 | 72.5% | 79.7% |
| 1okcA00 | 1.50.40.10 | Mainly Alpha › Alpha/alpha barrel › Mitochondrial carrier fold › Mitochondrial carrier domain | 0.60 | 46.0 | 3.30e-01 | 83.5% | 46.2% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 54.0 | 4.58e-01 | 100.0% | 67.6% |
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 42.0 | 3.55e-01 | 73.6% | 79.9% |
| 1wgwA00 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.58 | 40.0 | 3.99e-01 | 84.6% | 67.7% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 40.0 | 3.60e-01 | 73.6% | 65.4% |
| 3hdeC00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.56 | 49.0 | 4.09e-01 | 97.8% | 69.5% |
| 3w0lD02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.55 | 47.0 | 3.27e-01 | 100.0% | 58.5% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.54 | 48.0 | 4.01e-01 | 100.0% | 89.4% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.52 | 43.0 | 2.88e-01 | 93.4% | 76.6% |
| 2jnsA01 | 1.20.1270.220 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 35.0 | 3.68e-01 | 71.4% | 82.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590119 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.87 | 73.0 | 7.40e-01 | 100.0% | 88.9% |
| 4032613 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.87 | 82.0 | 7.72e-01 | 98.9% | 87.6% |
| 3589888 | 4275.1.1.0 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like | 0.85 | 71.0 | 7.22e-01 | 100.0% | 90.0% |
| 3947908 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.80 | 75.0 | 7.54e-01 | 97.8% | 100.0% |
| 377920 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.80 | 75.0 | 7.37e-01 | 100.0% | 94.8% |
| 4031309 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.78 | 73.0 | 7.37e-01 | 97.8% | 100.0% |
| 4031430 | 4275.1.1.1 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Phage_connect_1 | 0.77 | 70.0 | 6.70e-01 | 98.9% | 91.4% |
| 3976621 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.62 | 54.0 | 5.06e-01 | 93.4% | 97.3% |
| 3309297 | 632.1.1.11 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › HYOU1_C | 0.61 | 42.0 | 4.51e-01 | 72.5% | 97.5% |
| 3889629 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.61 | 46.0 | 3.60e-01 | 81.3% | 80.5% |
| 3410870 | 108.2.1.2 ↗ | alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › OBP47_like | 0.57 | 46.0 | 3.75e-01 | 85.7% | 55.2% |
| 3706514 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.56 | 40.0 | 2.76e-01 | 74.7% | 65.2% |
| 3385807 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.55 | 34.0 | 3.32e-01 | 80.2% | 53.3% |
| 3988374 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.55 | 38.0 | 3.22e-01 | 73.6% | 69.1% |
| 3355385 | 106.1.1.12 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › DUF247 | 0.53 | 42.0 | 3.64e-01 | 90.1% | 98.1% |
| 3509228 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 40.0 | 3.25e-01 | 80.2% | 92.0% |
| 3802084 | 6155.1.1.14 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › Rer1 | 0.52 | 37.0 | 3.53e-01 | 73.6% | 64.8% |
| 5057500 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.52 | 36.0 | 3.29e-01 | 79.1% | 52.8% |
| 3899601 | 377.1.1.18 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD | 0.52 | 43.0 | 3.85e-01 | 98.9% | 64.6% |
| 3245706 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.51 | 39.0 | 3.34e-01 | 81.3% | 70.3% |
| 5080217 | 3281.1.1.0 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related | 0.51 | 44.0 | 2.72e-01 | 100.0% | 47.1% |
| 3836314 | 109.4.1.450 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF247 | 0.51 | 39.0 | 2.81e-01 | 84.6% | 43.7% |