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MK448795.1__QBX20652.1__Javan527_0068__00008
Bact-VirMK448795.1__QBX20652.1__Javan527_0068__00008
Identity
- Accession:
- MK448795 ↗
- Kingdom:
- phage
Quality
64.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-47
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kt2A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 42.0 | 3.72e-01 | 97.7% | 46.4% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 46.0 | 2.79e-01 | 88.4% | 14.9% |
| 7qzqA01 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.56 | 45.0 | 2.77e-01 | 100.0% | 21.0% |
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 41.0 | 2.67e-01 | 97.7% | 40.5% |
| 5upiA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.52 | 39.0 | 2.81e-01 | 100.0% | 72.3% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 41.0 | 3.53e-01 | 95.3% | 53.3% |
| 2y3mA02 | 3.30.1370.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 35.0 | 3.33e-01 | 97.7% | 55.4% |
| 2cnqA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 39.0 | 2.86e-01 | 88.4% | 57.3% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 2.91e-01 | 97.7% | 64.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4282792 | 375.1.1.44 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase | 0.69 | 29.0 | 3.26e-01 | 74.4% | 48.6% |
| 3325733 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.68 | 41.0 | 3.92e-01 | 83.7% | 50.0% |
| 3332869 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.65 | 43.0 | 4.13e-01 | 95.3% | 58.0% |
| 3270016 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 50.0 | 2.99e-01 | 95.3% | 23.8% |
| 3632002 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.61 | 42.0 | 4.21e-01 | 100.0% | 73.3% |
| 3981126 | 4125.1.1.4 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like › NA37 | 0.56 | 38.0 | 4.12e-01 | 95.3% | 88.6% |
| 3515089 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.56 | 45.0 | 3.89e-01 | 95.3% | 57.4% |
| 4625008 | 3433.1.1.4 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Plasmid-encoded ParB dimerization domain › NA37 | 0.55 | 38.0 | 4.07e-01 | 95.3% | 88.6% |
| 3214800 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.53 | 38.0 | 3.89e-01 | 81.4% | 95.0% |
| 3274193 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 41.0 | 2.23e-01 | 93.0% | 4.6% |
| 4945330 | 4294.1.1.11 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › ResIII | 0.52 | 36.0 | 3.18e-01 | 97.7% | 47.1% |
| 4030232 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.51 | 41.0 | 2.45e-01 | 100.0% | 26.5% |
| 3796448 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.50 | 37.0 | 3.70e-01 | 86.0% | 93.3% |
| 2568928 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.50 | 35.0 | 3.41e-01 | 83.7% | 66.7% |
| 5000595 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.50 | 39.0 | 2.59e-01 | 86.0% | 35.6% |