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MK448796.1__QBX20681.1__Javan53_0022__00022

Bact-Vir

MK448796.1__QBX20681.1__Javan53_0022__00022

Identity

Accession:
MK448796 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-126
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 53.0 6.40e-01 74.6% 100.0%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 49.0 5.25e-01 75.4% 69.6%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 55.0 5.99e-01 79.4% 83.8%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 48.0 4.60e-01 74.6% 54.9%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 48.0 5.34e-01 75.4% 78.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.77 49.0 6.10e-01 71.4% 100.0%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 6.25e-01 79.4% 98.9%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 55.0 6.03e-01 79.4% 87.7%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 6.01e-01 78.6% 89.3%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 54.0 5.93e-01 79.4% 87.6%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 51.0 5.89e-01 76.2% 90.6%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 53.0 5.64e-01 79.4% 80.4%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 47.0 5.37e-01 76.2% 81.6%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 5.81e-01 79.4% 89.3%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.64e-01 79.4% 83.3%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 47.0 4.53e-01 78.6% 59.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 44.0 4.82e-01 96.0% 75.0%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 5.02e-01 70.6% 79.6%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 5.10e-01 78.6% 80.0%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.94e-01 78.6% 72.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 4.57e-01 97.6% 69.2%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.43e-01 84.9% 86.8%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 4.95e-01 77.8% 74.8%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.71e-01 79.4% 67.6%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.41e-01 74.6% 65.4%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.41e-01 78.6% 59.5%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.64 45.0 4.38e-01 94.4% 65.9%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 5.10e-01 91.3% 93.6%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 4.23e-01 97.6% 73.0%
7ovuA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 37.0 3.23e-01 78.6% 42.0%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.57 44.0 3.45e-01 82.5% 64.9%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 46.0 4.69e-01 91.3% 97.6%
5llwA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 32.0 3.16e-01 84.1% 53.3%
6zxbA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 33.0 3.17e-01 79.4% 53.5%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.52 38.0 3.37e-01 88.1% 51.1%
3hvaA00 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.51 33.0 3.03e-01 79.4% 48.8%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 30.0 3.74e-01 72.2% 97.3%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 24.0 3.20e-01 76.2% 84.8%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4231800 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 57.0 6.45e-01 93.7% 94.7%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 51.0 6.25e-01 77.0% 96.4%
4971941 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 47.0 6.15e-01 72.2% 100.0%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.79 54.0 5.90e-01 79.4% 81.5%
5043135 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.79 49.0 5.62e-01 75.4% 83.2%
3868765 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.78 55.0 6.27e-01 71.4% 96.8%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 56.0 5.13e-01 79.4% 58.1%
5044892 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 56.0 5.91e-01 78.6% 80.9%
4363314 101.1.2.485 alpha arrays › HTH › HTH › winged helix domain › DUF2513 0.77 63.0 6.63e-01 99.2% 94.8%
5076142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 46.0 5.35e-01 73.8% 80.0%
4960288 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 54.0 4.76e-01 77.8% 51.4%
4940868 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.77 48.0 5.49e-01 74.6% 83.2%
3919567 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.77 54.0 6.15e-01 72.2% 94.7%
5025451 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.77 48.0 5.11e-01 74.6% 71.8%
3228605 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.77 52.0 4.50e-01 76.2% 47.0%
5041315 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 54.0 6.05e-01 80.2% 91.0%
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 54.0 6.01e-01 78.6% 89.3%
4926994 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.76 49.0 5.38e-01 76.2% 78.8%
4947503 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 54.0 4.97e-01 80.2% 57.5%
5031662 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 54.0 5.47e-01 79.4% 73.6%
3957963 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 49.0 5.59e-01 73.0% 86.3%
4959456 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 54.0 4.79e-01 79.4% 53.5%
5051882 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.76 49.0 5.22e-01 77.0% 74.5%
4978596 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 56.0 5.62e-01 80.2% 76.0%
3289681 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 52.0 4.43e-01 77.8% 45.6%
3587894 101.1.2.49 alpha arrays › HTH › HTH › winged helix domain › PadR,Vir_act_alpha_C 0.75 51.0 4.53e-01 77.8% 50.3%
4928248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 48.0 4.79e-01 76.2% 63.1%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 49.0 5.75e-01 74.6% 93.3%
5065235 101.1.2.738 alpha arrays › HTH › HTH › winged helix domain › Vir_act_alpha_C 0.74 50.0 4.37e-01 77.8% 47.0%
3289064 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.74 46.0 4.35e-01 75.4% 52.7%
5053457 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 55.0 4.66e-01 81.7% 49.7%
5071269 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 53.0 4.41e-01 79.4% 45.2%
4944813 101.1.2.819 alpha arrays › HTH › HTH › winged helix domain › PF27231 0.73 53.0 4.61e-01 75.4% 68.1%
4999286 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 53.0 4.61e-01 79.4% 52.2%
4999532 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 55.0 4.39e-01 78.6% 46.8%
5076521 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.72 49.0 4.90e-01 98.4% 66.9%
4976218 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 54.0 5.61e-01 81.7% 81.7%
5046461 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 52.0 4.41e-01 79.4% 47.0%
4961487 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 45.0 4.78e-01 76.2% 69.6%
4978090 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 52.0 4.30e-01 78.6% 43.7%
3944118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 48.0 5.62e-01 73.8% 94.4%
5060792 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 55.0 5.64e-01 81.7% 81.5%
5065027 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 53.0 5.02e-01 77.0% 66.2%
5061948 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 54.0 5.12e-01 77.8% 72.9%
4527970 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.71 51.0 4.35e-01 74.6% 47.5%
1299892 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.71 46.0 4.89e-01 72.2% 73.7%
4966155 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 51.0 5.27e-01 76.2% 80.8%
5073929 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 51.0 5.43e-01 80.2% 87.3%
5054914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 48.0 5.17e-01 74.6% 81.8%
3997528 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.69 50.0 4.81e-01 75.4% 91.0%
5005295 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 50.0 5.02e-01 76.2% 73.1%
3589189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 43.0 4.33e-01 70.6% 63.2%
4998174 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 53.0 4.61e-01 81.0% 61.1%
5055466 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 49.0 5.13e-01 76.2% 92.2%
3644266 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 49.0 5.50e-01 91.3% 98.0%
3810002 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.66 49.0 5.26e-01 91.3% 89.1%
4991742 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 54.0 5.33e-01 84.9% 94.6%
5048462 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.42e-01 70.6% 68.0%
3240179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 5.20e-01 90.5% 91.4%
4982781 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.64 47.0 5.06e-01 76.2% 88.2%
3936891 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 5.02e-01 93.7% 94.7%
4995959 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.70e-01 73.0% 80.9%
4944051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 54.0 4.80e-01 88.9% 82.9%
3206556 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.63 44.0 3.52e-01 76.2% 36.8%
3779718 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.62 46.0 3.66e-01 76.2% 71.2%
3979999 101.1.2.274 alpha arrays › HTH › HTH › winged helix domain › SgrR_N 0.61 42.0 4.63e-01 73.0% 85.7%
4946426 3241.1.1.0 alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 0.58 44.0 3.67e-01 78.6% 70.7%
3622028 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.58 50.0 4.82e-01 91.3% 82.9%
4682115 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.53 29.0 3.38e-01 81.7% 73.3%
5077595 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 35.0 3.73e-01 76.2% 77.3%
3619671 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.52 48.0 3.78e-01 100.0% 79.9%
3218069 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.51 27.0 3.55e-01 79.4% 100.0%
3388102 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.50 25.0 3.39e-01 75.4% 92.3%