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MK448796.1__QBX20726.1__Javan53_0067__00067
Bact-VirMK448796.1__QBX20726.1__Javan53_0067__00067
Identity
- Accession:
- MK448796 ↗
- Kingdom:
- phage
Quality
85.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 110-193
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.71 | 59.0 | 5.82e-01 | 92.9% | 93.3% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.67 | 46.0 | 4.44e-01 | 71.4% | 95.7% |
| 1o5uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 41.0 | 4.11e-01 | 98.8% | 60.2% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.66 | 55.0 | 4.97e-01 | 91.7% | 94.7% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 58.0 | 5.29e-01 | 100.0% | 83.0% |
| 4exoA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 44.0 | 3.70e-01 | 71.4% | 61.0% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.64 | 51.0 | 4.43e-01 | 98.8% | 57.1% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 56.0 | 4.72e-01 | 100.0% | 67.1% |
| 4hh3A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 43.0 | 3.89e-01 | 70.2% | 86.8% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.62 | 43.0 | 4.25e-01 | 72.6% | 83.3% |
| 2z0fA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.61 | 46.0 | 4.34e-01 | 81.0% | 98.0% |
| 1p5dX04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.59 | 45.0 | 4.35e-01 | 81.0% | 92.5% |
| 3qjhA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.84e-01 | 100.0% | 88.8% |
| 4il7A00 | 2.60.120.1300 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 49.0 | 4.98e-01 | 91.7% | 100.0% |
| 3k94A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.58 | 52.0 | 3.88e-01 | 100.0% | 52.8% |
| 4gj4D00 | 3.30.450.260 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem NO binding associated domain | 0.58 | 41.0 | 3.73e-01 | 75.0% | 86.3% |
| 1qwrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 47.0 | 4.69e-01 | 100.0% | 85.4% |
| 2dkhA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.57 | 43.0 | 3.89e-01 | 79.8% | 60.5% |
| 3kd4A03 | 2.60.120.1130 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 51.0 | 4.33e-01 | 100.0% | 92.0% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.57 | 42.0 | 3.41e-01 | 79.8% | 89.2% |
| 2wfpA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 47.0 | 4.50e-01 | 100.0% | 78.6% |
| 3by9B01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 39.0 | 3.37e-01 | 71.4% | 74.0% |
| 1nrjA00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 40.0 | 3.29e-01 | 72.6% | 57.1% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.56 | 38.0 | 4.15e-01 | 70.2% | 98.5% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 49.0 | 4.31e-01 | 100.0% | 87.7% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.56 | 38.0 | 3.43e-01 | 71.4% | 68.1% |
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.56 | 39.0 | 3.49e-01 | 72.6% | 71.6% |
| 3isrA02 | 2.60.40.2250 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 4.25e-01 | 91.7% | 75.0% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.55 | 40.0 | 3.25e-01 | 78.6% | 89.8% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 4.39e-01 | 100.0% | 86.7% |
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 4.33e-01 | 100.0% | 80.0% |
| 1vx7H01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 41.0 | 4.15e-01 | 81.0% | 90.6% |
| 2pytA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 46.0 | 4.04e-01 | 100.0% | 63.3% |
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 45.0 | 4.19e-01 | 100.0% | 72.7% |
| 2o3gA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 36.0 | 3.78e-01 | 70.2% | 98.7% |
| 2ozjA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 45.0 | 4.14e-01 | 100.0% | 73.4% |
| 3lwcA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 44.0 | 4.15e-01 | 100.0% | 76.7% |
| 3eo6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 46.0 | 4.30e-01 | 100.0% | 84.0% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 46.0 | 4.11e-01 | 100.0% | 72.3% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 43.0 | 4.07e-01 | 100.0% | 74.8% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 4.10e-01 | 100.0% | 81.8% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 4.11e-01 | 100.0% | 85.0% |
| 3cueC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 38.0 | 3.26e-01 | 81.0% | 83.9% |
| 2qnkA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 43.0 | 3.02e-01 | 96.4% | 79.0% |
| 4e2gC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 44.0 | 3.90e-01 | 100.0% | 69.8% |
| 3bvxA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 44.0 | 3.70e-01 | 100.0% | 76.2% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 43.0 | 3.97e-01 | 100.0% | 80.7% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185630 | 3386.1.1.2 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › gp37_C | 0.71 | 59.0 | 5.84e-01 | 92.9% | 94.4% |
| 3444038 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.71 | 50.0 | 5.02e-01 | 73.8% | 89.4% |
| 4291120 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.68 | 60.0 | 5.20e-01 | 100.0% | 68.9% |
| 3528111 | 10.21.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 | 0.68 | 61.0 | 5.36e-01 | 100.0% | 71.2% |
| 4041127 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.67 | 43.0 | 3.49e-01 | 96.4% | 36.0% |
| 3547860 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.67 | 60.0 | 5.19e-01 | 100.0% | 68.5% |
| 3977356 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.65 | 41.0 | 3.23e-01 | 92.9% | 30.9% |
| 4028321 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 45.0 | 3.48e-01 | 72.6% | 41.6% |
| 4110294 | 223.1.1.118 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30448 | 0.65 | 44.0 | 4.16e-01 | 70.2% | 72.0% |
| 4042767 | 223.1.1.103 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 | 0.63 | 45.0 | 3.81e-01 | 72.6% | 54.1% |
| 3590871 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.63 | 43.0 | 2.98e-01 | 70.2% | 25.4% |
| 3223489 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.63 | 44.0 | 3.78e-01 | 72.6% | 54.6% |
| 5051941 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 43.0 | 3.62e-01 | 72.6% | 54.3% |
| 4028834 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.62 | 43.0 | 3.87e-01 | 73.8% | 58.3% |
| 153293 | 11.1.5.22 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Collagen_bind | 0.61 | 54.0 | 4.47e-01 | 100.0% | 62.2% |
| 5064269 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.61 | 45.0 | 4.58e-01 | 79.8% | 97.6% |
| 4977897 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 43.0 | 3.67e-01 | 72.6% | 57.0% |
| 3482975 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.61 | 42.0 | 3.69e-01 | 71.4% | 57.6% |
| 4279762 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 42.0 | 4.22e-01 | 72.6% | 84.7% |
| 3687155 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.60 | 45.0 | 3.76e-01 | 79.8% | 60.7% |
| 3592234 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 41.0 | 3.80e-01 | 71.4% | 77.3% |
| 3267300 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.60 | 42.0 | 3.63e-01 | 72.6% | 53.8% |
| 5050853 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.60 | 42.0 | 2.90e-01 | 72.6% | 26.9% |
| 3191396 | 223.2.1.7 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N | 0.60 | 41.0 | 3.50e-01 | 72.6% | 62.9% |
| 3698579 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.59 | 41.0 | 3.73e-01 | 71.4% | 77.3% |
| 4029381 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 41.0 | 3.22e-01 | 72.6% | 42.2% |
| 5053495 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 41.0 | 3.32e-01 | 72.6% | 50.6% |
| 4561171 | 244.1.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › FAD_binding_3 | 0.58 | 44.0 | 3.26e-01 | 81.0% | 37.7% |
| 4019349 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.58 | 43.0 | 2.78e-01 | 79.8% | 18.5% |
| 4392644 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.58 | 43.0 | 3.56e-01 | 79.8% | 49.0% |
| 3691605 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.58 | 43.0 | 3.77e-01 | 79.8% | 70.0% |
| 3733990 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.58 | 43.0 | 3.54e-01 | 79.8% | 56.8% |
| 3838661 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.57 | 39.0 | 3.88e-01 | 70.2% | 74.4% |
| 4575250 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.57 | 42.0 | 3.38e-01 | 81.0% | 90.8% |
| 4928935 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 39.0 | 3.71e-01 | 71.4% | 84.0% |
| 3401074 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 47.0 | 4.24e-01 | 91.7% | 87.0% |
| 3734699 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.56 | 42.0 | 3.49e-01 | 79.8% | 57.3% |
| 5077119 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 39.0 | 3.29e-01 | 73.8% | 50.0% |
| 4926979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 39.0 | 3.52e-01 | 71.4% | 72.2% |
| 3937820 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 38.0 | 3.80e-01 | 70.2% | 91.8% |
| 3989253 | 223.1.1.45 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GdpP_PAS | 0.55 | 40.0 | 3.79e-01 | 76.2% | 81.0% |
| 3928706 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.55 | 39.0 | 3.16e-01 | 75.0% | 57.6% |
| 4279392 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 44.0 | 4.25e-01 | 100.0% | 78.9% |
| 3216049 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.54 | 39.0 | 3.06e-01 | 75.0% | 56.7% |
| 4008916 | 223.1.1.103 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 | 0.54 | 44.0 | 2.92e-01 | 90.5% | 33.6% |
| 5055694 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 38.0 | 3.47e-01 | 76.2% | 84.3% |
| 163801 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.53 | 45.0 | 4.13e-01 | 100.0% | 72.7% |
| 3437479 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 38.0 | 4.15e-01 | 88.1% | 98.5% |
| 3251228 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 38.0 | 3.23e-01 | 77.4% | 81.4% |
| 4997177 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 46.0 | 4.19e-01 | 100.0% | 73.0% |
| 4880519 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 43.0 | 3.92e-01 | 100.0% | 68.4% |
| 4984438 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 44.0 | 4.19e-01 | 100.0% | 97.1% |
| 4027836 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.51 | 38.0 | 3.20e-01 | 79.8% | 85.3% |
| 3277683 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 43.0 | 3.54e-01 | 100.0% | 49.1% |
| 3271763 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 38.0 | 3.23e-01 | 81.0% | 82.0% |
| 4932407 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.51 | 38.0 | 3.94e-01 | 79.8% | 91.3% |
| 4616211 | 5084.1.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW | 0.51 | 41.0 | 3.30e-01 | 92.9% | 87.5% |
| 3974066 | 10.12.1.8 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › AraC_binding | 0.51 | 41.0 | 3.44e-01 | 94.0% | 50.7% |
| 3401928 | 220.1.1.192 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP_C | 0.50 | 38.0 | 3.32e-01 | 83.3% | 97.1% |
| 4948685 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.50 | 40.0 | 3.71e-01 | 89.3% | 100.0% |
| 5034165 | 220.5.1.1 ↗ | beta barrels › PH domain-like › NucS N-terminal domain › NucS N-terminal domain › NucS_N | 0.50 | 41.0 | 3.61e-01 | 90.5% | 93.6% |
D2
medium
residues 7-75
Domain cluster:
rep: NC_028700.1__YP_009191733.1__AU160_gp64__00064__D2-66
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ykwA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 51.0 | 4.52e-01 | 89.9% | 99.1% |
| 1r26A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 49.0 | 4.24e-01 | 91.3% | 91.2% |
| 2p7sA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.59 | 46.0 | 4.05e-01 | 88.4% | 94.5% |
| 2oq8A00 | 2.60.40.2930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 3.52e-01 | 88.4% | 90.0% |
| 5tkyA04 | 2.60.34.10 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 | 0.56 | 42.0 | 3.63e-01 | 82.6% | 92.2% |
| 2hqsA01 | 3.40.50.10070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain | 0.55 | 46.0 | 3.74e-01 | 97.1% | 84.5% |
| 6r2nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 3.09e-01 | 75.4% | 51.4% |
| 3u83A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.14e-01 | 71.0% | 71.6% |
| 4bfiB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 35.0 | 3.07e-01 | 71.0% | 81.2% |
| 3gvzA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.51 | 43.0 | 3.04e-01 | 100.0% | 99.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3855125 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.62 | 50.0 | 3.34e-01 | 91.3% | 60.0% |
| 4995333 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.61 | 51.0 | 3.68e-01 | 94.2% | 76.2% |
| 3290365 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 44.0 | 3.73e-01 | 81.2% | 65.8% |
| 3862290 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 39.0 | 3.02e-01 | 71.0% | 70.3% |
| 3484772 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.57 | 44.0 | 3.60e-01 | 88.4% | 84.8% |
| 3709548 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 38.0 | 3.16e-01 | 71.0% | 97.7% |
| 5001466 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.55 | 47.0 | 3.06e-01 | 100.0% | 80.9% |
| 3272552 | 3249.1.1.1 ↗ | beta sandwiches › beta-sandwich domain in YqeH GTPase › beta-sandwich domain in YqeH GTPase › beta-sandwich domain in YqeH GTPase › YqeH-like_C | 0.54 | 38.0 | 3.00e-01 | 91.3% | 33.5% |
| 4982503 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.53 | 46.0 | 3.00e-01 | 100.0% | 86.8% |
| 3229258 | 2485.1.1.96 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like_DJC16_3rd | 0.53 | 46.0 | 3.74e-01 | 98.6% | 95.6% |
| 3755783 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.02e-01 | 71.0% | 69.2% |
| 134473 | 210.1.2.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT | 0.51 | 43.0 | 3.04e-01 | 100.0% | 99.6% |
| 4930386 | 11.1.1.1395 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HcyBio | 0.50 | 40.0 | 3.60e-01 | 89.9% | 93.0% |