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MK448817.1__QBX21759.1__Javan59_0030__00030

Bact-Vir

MK448817.1__QBX21759.1__Javan59_0030__00030

Identity

Accession:
MK448817 ↗
Kingdom:
phage

Quality

89.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan59

TaxID: 2548277

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-65
PDB
Domain cluster: representative
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF07638.18 Sigma70_ECF 21.6 2.50e-04 100.0% 29.2%
PF05263.18 best DUF722 31.4 2.70e-07 100.0% 46.0%
PF04545.23 Sigma70_r4 26.4 5.40e-06 81.5% 76.0%
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 65.0 6.87e-01 80.0% 79.3%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 58.0 6.16e-01 73.8% 72.4%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 60.0 6.82e-01 76.9% 89.8%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 78.0 7.90e-01 100.0% 93.8%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 63.0 6.26e-01 81.5% 70.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 75.0 7.10e-01 100.0% 77.3%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 72.0 6.99e-01 98.5% 79.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 67.0 6.17e-01 95.4% 65.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 74.0 7.64e-01 100.0% 98.4%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 58.0 5.93e-01 76.9% 71.4%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 67.0 5.96e-01 96.9% 60.9%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 72.0 7.39e-01 93.8% 95.1%
1j5yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 59.0 6.03e-01 76.9% 73.4%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 71.0 6.65e-01 100.0% 75.0%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 56.0 5.72e-01 75.4% 71.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 7.07e-01 92.3% 92.1%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 6.55e-01 100.0% 77.6%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 61.0 5.92e-01 76.9% 70.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 5.74e-01 76.9% 73.0%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 6.41e-01 84.6% 89.1%
1lvaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 58.0 5.95e-01 76.9% 77.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 6.13e-01 78.5% 87.0%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 54.0 6.11e-01 72.3% 90.0%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 57.0 5.16e-01 78.5% 55.2%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 58.0 4.61e-01 81.5% 38.8%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 5.29e-01 95.4% 52.4%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.79 74.0 5.02e-01 100.0% 33.5%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 5.59e-01 76.9% 69.4%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 47.0 5.42e-01 72.3% 86.7%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.41e-01 81.5% 36.5%
5zr6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 5.63e-01 75.4% 79.7%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 6.31e-01 95.4% 87.7%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 57.0 4.29e-01 84.6% 33.3%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 5.03e-01 76.9% 60.5%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 51.0 5.05e-01 76.9% 65.2%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.03e-01 76.9% 63.9%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.46e-01 93.8% 95.0%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.32e-01 76.9% 73.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.07e-01 76.9% 68.7%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 5.11e-01 76.9% 69.1%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.23e-01 76.9% 75.4%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.42e-01 72.3% 82.5%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 53.0 4.86e-01 78.5% 58.3%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.21e-01 76.9% 74.6%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.22e-01 75.4% 76.7%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 4.76e-01 73.8% 59.5%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.28e-01 89.2% 65.2%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.04e-01 76.9% 72.3%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.03e-01 81.5% 35.3%
8amzO01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.72 57.0 3.56e-01 84.6% 33.8%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 52.0 4.56e-01 75.4% 60.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.86e-01 75.4% 67.9%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.33e-01 90.8% 68.2%
6oinA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.07e-01 75.4% 95.5%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 5.70e-01 87.7% 84.8%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.57e-01 78.5% 58.5%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.71e-01 75.4% 69.6%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 57.0 3.96e-01 89.2% 39.4%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.54e-01 75.4% 69.8%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 4.82e-01 81.5% 63.5%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.58e-01 78.5% 60.5%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 4.82e-01 76.9% 88.0%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 4.47e-01 78.5% 54.3%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 58.0 4.64e-01 90.8% 55.0%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.89e-01 87.7% 61.7%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 4.35e-01 78.5% 55.1%
2gloA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 47.0 4.89e-01 78.5% 81.4%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.57e-01 75.4% 64.5%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 4.59e-01 81.5% 64.4%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 54.0 4.62e-01 89.2% 68.9%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 54.0 4.55e-01 89.2% 66.0%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.69e-01 87.7% 74.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 53.0 4.67e-01 89.2% 72.3%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 57.0 4.10e-01 100.0% 87.4%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 4.86e-01 86.2% 85.5%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.75e-01 76.9% 95.4%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 49.0 4.24e-01 84.6% 61.3%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 56.0 4.46e-01 100.0% 69.4%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 56.0 3.72e-01 98.5% 86.7%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.63 53.0 3.82e-01 98.5% 74.8%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 44.0 4.75e-01 73.8% 88.9%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.52e-01 93.8% 68.3%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 45.0 4.45e-01 80.0% 91.2%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 4.06e-01 75.4% 69.9%
5zl6A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.58 48.0 3.68e-01 92.3% 94.0%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.55 40.0 3.99e-01 78.5% 86.6%
1di1A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.50 42.0 2.85e-01 98.5% 94.5%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4624269 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.93 61.0 6.37e-01 76.9% 73.3%
5029404 101.1.2.92 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.88 71.0 5.71e-01 89.2% 47.8%
4165729 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 79.0 5.74e-01 100.0% 38.8%
5029842 101.1.2.645 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.86 79.0 6.53e-01 96.9% 60.0%
4644463 101.1.3.27 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_40 0.86 61.0 6.31e-01 86.2% 80.0%
4663875 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.85 74.0 4.89e-01 100.0% 25.4%
4112812 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 73.0 6.21e-01 100.0% 59.0%
4938897 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.84 59.0 5.59e-01 76.9% 62.7%
3578154 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.84 74.0 6.61e-01 100.0% 70.0%
4940480 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 59.0 6.32e-01 78.5% 87.3%
3284461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 73.0 4.78e-01 100.0% 24.8%
4033888 101.1.1.489 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF722 0.82 74.0 5.83e-01 100.0% 85.4%
3972282 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 72.0 6.75e-01 100.0% 81.0%
4097443 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.81 70.0 5.09e-01 100.0% 36.5%
3285621 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 66.0 6.09e-01 86.2% 73.8%
5074054 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.81 56.0 6.00e-01 73.8% 85.5%
4563221 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.81 70.0 6.18e-01 100.0% 66.3%
4084282 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 73.0 6.62e-01 100.0% 76.5%
5061230 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 61.0 5.55e-01 81.5% 62.4%
4570076 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.79 70.0 4.54e-01 100.0% 22.9%
4585396 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 70.0 5.20e-01 100.0% 40.0%
4213931 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 69.0 6.29e-01 100.0% 74.1%
3511772 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 55.0 5.05e-01 78.5% 56.5%
4026959 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.79 68.0 4.22e-01 93.8% 18.5%
3989015 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 64.0 5.38e-01 87.7% 81.0%
4934188 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 5.46e-01 87.7% 57.0%
4979704 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 58.0 5.98e-01 92.3% 85.0%
2578 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.78 53.0 5.06e-01 76.9% 61.3%
4383658 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.77 53.0 5.12e-01 76.9% 62.7%
4977009 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 50.0 5.08e-01 78.5% 67.7%
4086835 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.77 56.0 5.19e-01 78.5% 62.5%
4982701 101.1.2.109 ↗ alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.77 62.0 5.71e-01 89.2% 68.2%
3291136 183.1.1.0 ↗ alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain 0.76 61.0 4.60e-01 89.2% 37.3%
3339569 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.76 69.0 6.19e-01 100.0% 73.0%
3329805 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.76 69.0 5.09e-01 100.0% 40.6%
3955874 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.76 51.0 4.72e-01 76.9% 54.1%
3708827 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.76 62.0 4.49e-01 87.7% 44.1%
3962667 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 50.0 5.39e-01 70.8% 80.0%
4518447 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.76 68.0 5.69e-01 100.0% 59.1%
3978620 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.75 68.0 5.01e-01 100.0% 39.4%
3974728 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.75 52.0 4.88e-01 76.9% 58.7%
2140759 101.1.2.142 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.75 52.0 4.88e-01 75.4% 60.3%
4056602 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.75 67.0 4.89e-01 100.0% 37.1%
4926894 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 60.0 6.20e-01 95.4% 91.7%
3980765 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 67.0 4.97e-01 100.0% 39.4%
5032049 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 48.0 5.03e-01 75.4% 71.7%
3832359 101.1.2.97 ↗ alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.75 53.0 5.13e-01 75.4% 68.9%
4322147 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 67.0 3.96e-01 100.0% 13.4%
4253265 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.75 67.0 4.95e-01 100.0% 39.4%
4019534 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 52.0 5.42e-01 76.9% 80.0%
3668668 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.74 55.0 4.44e-01 80.0% 43.2%
4954772 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 55.0 5.88e-01 78.5% 92.7%
3969964 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.73 54.0 4.95e-01 78.5% 72.9%
5041641 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.73 58.0 5.53e-01 89.2% 73.3%
3948820 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.73 53.0 4.78e-01 80.0% 55.6%
5011311 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 57.0 5.50e-01 89.2% 74.7%
4982117 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.32e-01 81.5% 88.0%
5071274 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 5.35e-01 96.9% 63.2%
4979451 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 58.0 5.87e-01 95.4% 86.2%
3664504 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.73 54.0 4.07e-01 80.0% 34.2%
3314908 101.1.2.97 ↗ alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.73 51.0 4.78e-01 75.4% 60.0%
5000128 101.1.2.109 ↗ alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.73 57.0 5.24e-01 86.2% 65.9%
2701 101.1.2.109 ↗ alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.72 58.0 5.28e-01 89.2% 65.2%
3360961 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.72 54.0 3.94e-01 80.0% 30.9%
None — 0.72 62.0 5.56e-01 98.5% 68.9%
4068007 101.1.2.233 ↗ alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH 0.71 61.0 6.00e-01 96.9% 87.1%
3280606 101.1.2.743 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28795 0.71 59.0 5.55e-01 92.3% 75.0%
3935496 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.71 59.0 4.27e-01 90.8% 40.0%
None — 0.71 53.0 4.06e-01 80.0% 36.0%
3299379 142.1.1.3 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.71 55.0 4.22e-01 84.6% 37.3%
3662896 101.1.1.411 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 0.71 55.0 4.45e-01 84.6% 44.8%
5030830 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 49.0 4.80e-01 76.9% 67.1%
4990436 101.1.2.109 ↗ alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.71 55.0 5.27e-01 89.2% 74.7%
3577478 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.71 58.0 4.19e-01 90.8% 38.9%
3284984 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.70 61.0 4.08e-01 96.9% 45.3%
3990437 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.70 58.0 4.24e-01 90.8% 41.1%
5065637 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.70 57.0 5.11e-01 90.8% 65.6%
4955905 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.68 55.0 5.43e-01 98.5% 82.9%
3986364 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.68 52.0 4.70e-01 92.3% 61.1%
3253586 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.67 55.0 4.28e-01 90.8% 47.6%
3787293 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 54.0 4.38e-01 89.2% 51.2%
5025027 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 52.0 4.21e-01 84.6% 52.0%
5076381 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 52.0 4.50e-01 84.6% 65.0%
3890040 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 54.0 4.19e-01 89.2% 45.7%
5023608 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 53.0 4.28e-01 89.2% 75.4%
4996071 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 54.0 4.84e-01 89.2% 75.6%
5042712 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 54.0 4.61e-01 89.2% 67.6%
4947863 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 52.0 4.71e-01 87.7% 72.2%
4947168 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 51.0 4.59e-01 84.6% 70.0%
4955900 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.65 52.0 4.68e-01 90.8% 63.3%
5036215 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.65 53.0 4.45e-01 89.2% 60.0%
3204144 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.65 57.0 4.55e-01 98.5% 90.0%
4944102 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.64 52.0 4.69e-01 89.2% 75.6%
5042406 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.64 49.0 4.38e-01 84.6% 67.4%
5025139 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.63 51.0 4.56e-01 89.2% 71.6%
5040184 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.55e-01 84.6% 73.8%
5019202 101.1.1.494 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.62 52.0 5.03e-01 95.4% 94.7%
3984771 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.60 49.0 4.04e-01 95.4% 48.0%
3946141 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.60 50.0 4.74e-01 96.9% 80.0%