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MK448825.1__QBX22201.1__Javan639_0031__00012
Bact-VirMK448825.1__QBX22201.1__Javan639_0031__00012
Identity
- Accession:
- MK448825 ↗
- Kingdom:
- phage
Quality
97.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-86
Domain cluster:
rep: MF001358.1__ASZ76771.1__X__00105__D7-99
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF15738.12 best | YafQ_toxin | 105.4 | 2.30e-30 | 100.0% | 92.0% |
| PF05016.22 | ParE_toxin | 29.5 | 1.30e-06 | 98.8% | 93.3% |
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.93 | 88.0 | 8.56e-01 | 100.0% | 92.2% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.86 | 81.0 | 7.95e-01 | 100.0% | 97.7% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.84 | 73.0 | 7.24e-01 | 100.0% | 89.7% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.83 | 77.0 | 7.60e-01 | 100.0% | 95.4% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.83 | 72.0 | 6.90e-01 | 100.0% | 82.1% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.82 | 71.0 | 7.08e-01 | 98.8% | 90.7% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.81 | 75.0 | 7.36e-01 | 100.0% | 93.3% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.81 | 76.0 | 7.33e-01 | 100.0% | 90.4% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.79 | 73.0 | 7.21e-01 | 100.0% | 94.3% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.79 | 71.0 | 6.98e-01 | 100.0% | 92.1% |
| 4mcxF00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.78 | 72.0 | 7.04e-01 | 100.0% | 98.9% |
| 6bm0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 42.0 | 2.71e-01 | 79.8% | 13.9% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 43.0 | 2.80e-01 | 70.2% | 20.3% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.61 | 54.0 | 5.26e-01 | 100.0% | 89.1% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 43.0 | 2.91e-01 | 73.8% | 35.3% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 38.0 | 2.59e-01 | 72.6% | 20.2% |
| 1ss4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 41.0 | 3.43e-01 | 79.8% | 94.6% |
| 2retA00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.55 | 40.0 | 4.01e-01 | 84.5% | 76.2% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.55 | 41.0 | 2.76e-01 | 78.6% | 69.6% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 3.66e-01 | 100.0% | 65.9% |
| 6iw6A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 41.0 | 3.83e-01 | 81.0% | 99.1% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 30.0 | 3.15e-01 | 100.0% | 55.8% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 38.0 | 3.32e-01 | 73.8% | 99.2% |
| 1gkaB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 42.0 | 3.36e-01 | 85.7% | 71.3% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.54 | 40.0 | 3.00e-01 | 81.0% | 96.4% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 39.0 | 3.62e-01 | 78.6% | 98.2% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 44.0 | 3.07e-01 | 95.2% | 92.1% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 39.0 | 2.56e-01 | 86.9% | 24.9% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 43.0 | 3.90e-01 | 100.0% | 71.5% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1297412 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.93 | 88.0 | 8.54e-01 | 100.0% | 91.2% |
| 3165472 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.93 | 87.0 | 8.28e-01 | 98.8% | 92.6% |
| 5032565 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.90 | 83.0 | 8.27e-01 | 100.0% | 94.1% |
| 5014619 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 76.0 | 7.84e-01 | 100.0% | 95.0% |
| 4966674 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.89 | 76.0 | 7.62e-01 | 100.0% | 89.4% |
| 5029836 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.88 | 74.0 | 7.66e-01 | 100.0% | 92.5% |
| 4968316 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.88 | 78.0 | 7.70e-01 | 100.0% | 89.8% |
| 5014147 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.87 | 77.0 | 7.88e-01 | 100.0% | 97.5% |
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.87 | 75.0 | 7.75e-01 | 100.0% | 96.2% |
| 2807914 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.87 | 80.0 | 7.83e-01 | 100.0% | 92.1% |
| 5005256 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.87 | 77.0 | 7.71e-01 | 100.0% | 92.9% |
| 4999510 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.87 | 76.0 | 7.60e-01 | 100.0% | 91.8% |
| 2549544 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.86 | 81.0 | 7.95e-01 | 100.0% | 97.7% |
| 4969644 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 80.0 | 7.86e-01 | 100.0% | 95.6% |
| 4968774 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 73.0 | 7.68e-01 | 98.8% | 100.0% |
| 5063859 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 74.0 | 7.61e-01 | 100.0% | 96.2% |
| 4967722 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 73.0 | 7.55e-01 | 98.8% | 95.0% |
| 4966983 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.85 | 75.0 | 7.66e-01 | 98.8% | 97.5% |
| 5007067 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 80.0 | 7.86e-01 | 100.0% | 94.4% |
| 5031617 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 74.0 | 7.62e-01 | 97.6% | 97.5% |
| 5029202 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.85 | 71.0 | 7.07e-01 | 100.0% | 87.1% |
| 5031302 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.85 | 80.0 | 7.34e-01 | 100.0% | 96.2% |
| 5080427 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 71.0 | 7.32e-01 | 100.0% | 93.8% |
| 4994192 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.85 | 73.0 | 7.47e-01 | 100.0% | 96.2% |
| 3604507 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 75.0 | 7.22e-01 | 100.0% | 85.1% |
| 3602698 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 75.0 | 7.50e-01 | 100.0% | 94.1% |
| 5062498 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.84 | 75.0 | 7.52e-01 | 100.0% | 94.1% |
| 4933908 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 75.0 | 7.53e-01 | 100.0% | 95.3% |
| 4967379 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.83 | 74.0 | 7.40e-01 | 100.0% | 94.1% |
| 5052823 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 79.0 | 7.51e-01 | 100.0% | 92.6% |
| 2629016 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.83 | 77.0 | 7.60e-01 | 100.0% | 95.4% |
| 5018720 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 73.0 | 7.28e-01 | 100.0% | 92.9% |
| 3586933 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 76.0 | 7.29e-01 | 98.8% | 97.9% |
| 134040 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 72.0 | 6.90e-01 | 100.0% | 82.1% |
| 5016951 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 73.0 | 6.99e-01 | 98.8% | 84.2% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.81 | 75.0 | 7.36e-01 | 100.0% | 93.3% |
| 1877168 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 76.0 | 7.39e-01 | 100.0% | 92.4% |
| 4950220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 75.0 | 7.37e-01 | 100.0% | 93.3% |
| 4937462 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 75.0 | 7.16e-01 | 100.0% | 92.6% |
| 5027871 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.81 | 75.0 | 7.25e-01 | 100.0% | 90.3% |
| 5078519 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.80 | 75.0 | 7.20e-01 | 100.0% | 94.7% |
| 4948982 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.80 | 74.0 | 7.23e-01 | 100.0% | 94.4% |
| 4962176 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 69.0 | 7.06e-01 | 100.0% | 98.8% |
| 138730 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 71.0 | 6.98e-01 | 100.0% | 92.1% |
| 2057235 | 4312.1.1.5 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › RelE | 0.78 | 68.0 | 6.22e-01 | 100.0% | 72.2% |
| 1124757 | 4312.1.1.2 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin | 0.78 | 72.0 | 6.93e-01 | 100.0% | 97.8% |
| 5007064 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.78 | 63.0 | 6.60e-01 | 100.0% | 97.3% |
| 4993641 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 61.0 | 6.48e-01 | 100.0% | 94.7% |
| 4941339 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.75 | 69.0 | 6.26e-01 | 100.0% | 93.6% |
| 2706250 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.75 | 68.0 | 6.29e-01 | 100.0% | 82.9% |
| 5082625 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.74 | 68.0 | 6.62e-01 | 100.0% | 93.3% |
| 4993827 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.74 | 60.0 | 6.16e-01 | 100.0% | 91.3% |
| 3165163 | 4312.1.1.2 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin | 0.72 | 64.0 | 6.29e-01 | 97.6% | 100.0% |
| 5030390 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.67 | 53.0 | 5.28e-01 | 100.0% | 82.0% |
| 3388897 | 5.1.4.407 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, Alsin_RLD | 0.65 | 42.0 | 2.77e-01 | 100.0% | 14.7% |
| 3592992 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 42.0 | 2.81e-01 | 70.2% | 33.8% |
| 3474310 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.61 | 44.0 | 4.05e-01 | 76.2% | 62.7% |
| 5034142 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 43.0 | 2.77e-01 | 73.8% | 21.5% |
| 3699565 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 43.0 | 2.67e-01 | 73.8% | 43.8% |
| 3744900 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 40.0 | 2.74e-01 | 70.2% | 22.0% |
| 3484000 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 48.0 | 2.70e-01 | 100.0% | 6.5% |
| 3485757 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 42.0 | 2.58e-01 | 75.0% | 28.5% |
| 2074975 | 3779.1.1.0 ↗ | 0.54 | 39.0 | 3.55e-01 | 76.2% | 93.0% | |
| 3637257 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 47.0 | 3.26e-01 | 100.0% | 38.0% |
| 3384213 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.54 | 41.0 | 2.70e-01 | 83.3% | 78.4% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.54 | 36.0 | 3.57e-01 | 98.8% | 64.4% |
| 3237256 | 5.1.4.156 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 | 0.52 | 45.0 | 2.85e-01 | 96.4% | 85.8% |
| 3591346 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 37.0 | 2.36e-01 | 73.8% | 25.7% |
| 3311719 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 42.0 | 2.75e-01 | 94.0% | 82.5% |
| 3782385 | 5.1.4.78 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta | 0.51 | 41.0 | 2.62e-01 | 100.0% | 16.7% |