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MK448845.1__QBX23230.1__Javan118_0057__00007

Bact-Vir

MK448845.1__QBX23230.1__Javan118_0057__00007

Identity

Accession:
MK448845 ↗
Kingdom:
phage

Quality

73.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan118

TaxID: 2547987

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-46
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7l4aA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 44.0 2.87e-01 78.3% 54.8%
1x3bA00 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.60 43.0 3.00e-01 100.0% 24.0%
7asgA01 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.60 44.0 3.17e-01 100.0% 27.8%
2n1hA00 2.70.130.10 Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain 0.59 47.0 3.89e-01 95.7% 72.3%
3uepA00 2.30.330.10 Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like 0.58 46.0 3.98e-01 100.0% 81.2%
5wt7A00 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.56 40.0 2.87e-01 100.0% 25.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3781084 239.3.1.0 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain 0.64 44.0 3.02e-01 100.0% 21.3%
4669970 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 44.0 2.86e-01 76.1% 34.9%
3532425 239.3.1.1 ↗ beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.59 41.0 2.91e-01 100.0% 25.2%
4310836 2004.1.1.80 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin 0.58 40.0 2.61e-01 71.7% 32.7%
3675857 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.52 39.0 2.78e-01 93.5% 29.2%
3535752 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 36.0 2.69e-01 78.3% 28.6%
3220929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 41.0 3.60e-01 95.7% 100.0%