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MK448862.1__QBX24176.1__Javan178_0051__00051
Bact-VirMK448862.1__QBX24176.1__Javan178_0051__00051
Identity
- Accession:
- MK448862 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 56-134
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n7zA02 | 2.170.290.10 | Mainly Beta › Beta Complex › baseplate structural protein gp8, domain 2 › baseplate structural protein gp8, domain 2 | 0.63 | 53.0 | 4.24e-01 | 93.7% | 89.2% |
| 2i5hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 40.0 | 4.15e-01 | 75.9% | 90.3% |
| 2bdvA00 | 3.90.1680.10 | Alpha Beta › Alpha-Beta Complex › hypothetical protein yedk fold › SOS response associated peptidase-like | 0.51 | 41.0 | 3.11e-01 | 92.4% | 92.5% |
| 2pfcA00 | 3.10.129.30 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain | 0.50 | 40.0 | 3.34e-01 | 92.4% | 93.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937833 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.62 | 47.0 | 3.75e-01 | 81.0% | 93.8% |
| 4379635 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.58 | 41.0 | 3.84e-01 | 72.2% | 89.5% |
| 3567138 | 2.1.1.133 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4503 | 0.52 | 39.0 | 3.28e-01 | 82.3% | 95.0% |
| 3189631 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 39.0 | 3.37e-01 | 84.8% | 84.6% |
| 4308069 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.51 | 40.0 | 3.19e-01 | 91.1% | 77.3% |
| 3666058 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.50 | 37.0 | 3.52e-01 | 78.5% | 66.3% |
D2
medium
residues 1-55
Domain cluster:
representative