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MK448864.1__QBX24251.1__Javan180_0018__00020
Bact-VirMK448864.1__QBX24251.1__Javan180_0018__00020
Identity
- Accession:
- MK448864 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-72_87-123
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 44.0 | 4.25e-01 | 87.8% | 63.1% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 45.0 | 4.33e-01 | 87.8% | 65.1% |
| 2lqjA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 42.0 | 3.90e-01 | 87.8% | 57.4% |
| 2qmwA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 41.0 | 4.14e-01 | 87.8% | 71.4% |
| 3nrbB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 42.0 | 4.03e-01 | 85.1% | 67.5% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 39.0 | 3.89e-01 | 86.5% | 66.3% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 41.0 | 3.90e-01 | 85.1% | 62.9% |
| 3w7bA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 41.0 | 3.91e-01 | 87.8% | 64.8% |
| 3luyA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.56 | 40.0 | 3.79e-01 | 87.8% | 62.9% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 38.0 | 3.33e-01 | 85.1% | 46.5% |
| 2wbmA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 37.0 | 3.80e-01 | 86.5% | 72.9% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.55 | 37.0 | 3.61e-01 | 90.5% | 61.2% |
| 5c40B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 43.0 | 2.96e-01 | 91.9% | 91.0% |
| 3p96A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.54 | 39.0 | 3.82e-01 | 86.5% | 69.0% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 39.0 | 3.63e-01 | 79.7% | 66.7% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 37.0 | 3.87e-01 | 86.5% | 82.4% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.52 | 36.0 | 2.58e-01 | 73.0% | 49.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.52 | 35.0 | 3.30e-01 | 97.3% | 56.5% |
| 5d4nC00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.62e-01 | 85.1% | 64.3% |
| 1kwmA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.50 | 33.0 | 3.20e-01 | 83.8% | 56.8% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.89 | 83.0 | 6.21e-01 | 100.0% | 53.7% |
| 4927585 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.63 | 45.0 | 4.39e-01 | 86.5% | 68.8% |
| 5048300 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 40.0 | 3.58e-01 | 85.1% | 45.7% |
| 4948792 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.60 | 43.0 | 4.30e-01 | 87.8% | 74.7% |
| 4478722 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 42.0 | 3.74e-01 | 85.1% | 51.4% |
| 5063981 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 41.0 | 4.14e-01 | 86.5% | 73.3% |
| 5056500 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 40.0 | 3.83e-01 | 89.2% | 62.4% |
| 4030911 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.58 | 41.0 | 3.94e-01 | 87.8% | 65.5% |
| 4304504 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 41.0 | 3.76e-01 | 86.5% | 56.0% |
| 4316814 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 41.0 | 3.86e-01 | 86.5% | 61.7% |
| 4371656 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.57 | 40.0 | 3.72e-01 | 85.1% | 57.9% |
| 5074385 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 40.0 | 3.93e-01 | 87.8% | 70.0% |
| 3209003 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.56 | 34.0 | 3.22e-01 | 89.2% | 48.9% |
| 4274127 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.56 | 39.0 | 3.58e-01 | 85.1% | 54.5% |
| 3840001 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.56 | 41.0 | 3.95e-01 | 85.1% | 68.2% |
| 4976260 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.55 | 40.0 | 3.85e-01 | 87.8% | 67.1% |
| 4105300 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 38.0 | 3.56e-01 | 85.1% | 56.8% |
| 4612662 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 38.0 | 3.62e-01 | 85.1% | 59.1% |
| 4205431 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 38.0 | 3.57e-01 | 85.1% | 56.8% |
| 5023213 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 36.0 | 3.73e-01 | 81.1% | 72.9% |
| 3510650 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.54 | 37.0 | 3.44e-01 | 85.1% | 53.5% |
| 3486149 | 221.15.1.1 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase › DUF2340 | 0.54 | 38.0 | 4.05e-01 | 91.9% | 93.3% |
| 4394754 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.53 | 36.0 | 3.42e-01 | 85.1% | 57.8% |
| 3783088 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 36.0 | 3.62e-01 | 85.1% | 69.3% |
| 5024124 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.53 | 38.0 | 3.75e-01 | 86.5% | 71.2% |
| 4025515 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 37.0 | 3.13e-01 | 89.2% | 41.5% |
| 4173939 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.52 | 35.0 | 3.40e-01 | 83.8% | 58.9% |
| 3339301 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 37.0 | 4.00e-01 | 87.8% | 91.7% |
| 3379810 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 34.0 | 3.68e-01 | 97.3% | 85.0% |
| 3305599 | 304.55.1.20 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P | 0.52 | 39.0 | 3.72e-01 | 89.2% | 67.8% |
| 5051350 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 38.0 | 3.50e-01 | 79.7% | 64.0% |
| 4223968 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.51 | 35.0 | 3.45e-01 | 86.5% | 66.3% |
| 4107133 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.51 | 34.0 | 3.40e-01 | 85.1% | 66.7% |
| 5078624 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.51 | 41.0 | 3.71e-01 | 94.6% | 64.8% |
| 4942818 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.50 | 38.0 | 3.17e-01 | 100.0% | 44.3% |
| 4982133 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.50 | 34.0 | 3.34e-01 | 85.1% | 65.0% |