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MK448870.1__QBX24560.1__Javan192_0024__00024
Bact-VirMK448870.1__QBX24560.1__Javan192_0024__00024
Identity
- Accession:
- MK448870 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-172
Domain cluster:
rep: NC_031040.1__YP_009283227.1__BI030_gp31__00031__D4-146
D2
high
residues 275-447
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3oqcA02 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.66 | 59.0 | 5.46e-01 | 94.2% | 97.6% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.64 | 56.0 | 5.21e-01 | 91.9% | 87.6% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 53.0 | 4.87e-01 | 94.8% | 90.9% |
| 3m1uA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.58 | 48.0 | 4.90e-01 | 93.1% | 88.9% |
| 4durB01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.56 | 24.0 | 3.22e-01 | 87.9% | 75.3% |
| 1gmnA01 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.54 | 24.0 | 3.19e-01 | 87.9% | 76.1% |
| 1qmyA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 45.0 | 4.71e-01 | 91.9% | 100.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3519649 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.73 | 54.0 | 4.65e-01 | 76.3% | 94.0% |
| 3716797 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.72 | 53.0 | 4.51e-01 | 75.7% | 94.1% |
| 3271417 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.72 | 53.0 | 4.64e-01 | 75.7% | 92.4% |
| 3648094 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.71 | 53.0 | 4.51e-01 | 76.9% | 88.6% |
| 3438527 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.71 | 53.0 | 4.68e-01 | 76.9% | 94.0% |
| 4029045 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.71 | 53.0 | 4.47e-01 | 76.3% | 93.9% |
| 3606763 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 52.0 | 4.45e-01 | 75.7% | 92.7% |
| 3830898 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.71 | 53.0 | 4.70e-01 | 76.3% | 90.8% |
| 2755323 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.71 | 53.0 | 4.61e-01 | 77.5% | 90.3% |
| 2507468 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.70 | 53.0 | 4.58e-01 | 76.9% | 92.7% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.68 | 53.0 | 5.79e-01 | 93.6% | 100.0% |
| 3829242 | 219.1.1.113 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28979 | 0.66 | 55.0 | 4.69e-01 | 87.9% | 94.5% |
| 3290662 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.66 | 48.0 | 5.45e-01 | 84.4% | 100.0% |
| 3679774 | 219.1.1.23 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY_DUB | 0.65 | 50.0 | 3.48e-01 | 78.0% | 85.8% |
| 3804711 | 219.1.1.113 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PF28979 | 0.65 | 53.0 | 4.70e-01 | 87.3% | 94.1% |
| 3399872 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 55.0 | 5.26e-01 | 93.1% | 100.0% |
| 3233379 | 390.1.1.7 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_3 | 0.63 | 22.0 | 3.28e-01 | 86.1% | 69.3% |
| 3936469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 33.0 | 4.35e-01 | 91.9% | 95.6% |
| 7413 | 219.1.1.24 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N | 0.61 | 53.0 | 4.86e-01 | 94.8% | 90.5% |
| 4879299 | 219.1.1.45 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 | 0.61 | 50.0 | 4.50e-01 | 86.1% | 97.8% |
| 3399870 | 219.1.1.24 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N | 0.59 | 52.0 | 4.75e-01 | 93.6% | 95.6% |
| 3408014 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 50.0 | 4.59e-01 | 93.1% | 95.2% |
| 3536187 | 219.1.1.41 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 | 0.58 | 40.0 | 4.43e-01 | 70.5% | 91.4% |
| 3397758 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.58 | 50.0 | 4.63e-01 | 93.1% | 92.3% |
| 3219196 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.56 | 48.0 | 4.04e-01 | 91.3% | 93.7% |
| 4029401 | 219.1.1.14 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Josephin | 0.54 | 46.0 | 4.56e-01 | 91.9% | 91.4% |
| 3388732 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.51 | 24.0 | 3.26e-01 | 82.7% | 88.2% |
| 5059227 | 206.1.3.41 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_Ter | 0.51 | 37.0 | 3.39e-01 | 74.6% | 80.4% |
| 3500153 | 219.1.1.27 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Menin | 0.50 | 37.0 | 3.51e-01 | 91.3% | 64.8% |