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MK448873.1__QBX24733.1__Javan202_0054__00003

Bact-Vir

MK448873.1__QBX24733.1__Javan202_0054__00003

Identity

Accession:
MK448873 ↗
Kingdom:
phage

Quality

67.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan202

TaxID: 2548045

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 67-120
PDB
Domain cluster: representative
D2 high residues 135-185
PDB
Domain cluster: rep: MZ503613.1__QYC52399.1__X__00046__D113-159
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 35.0 3.25e-01 100.0% 35.9%
4kc9A02 1.20.120.1750 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 39.0 2.67e-01 72.5% 40.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598956 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.62 37.0 3.27e-01 94.1% 37.5%