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MK448882.1__QBX25158.1__Javan242_0002__00050

Bact-Vir

MK448882.1__QBX25158.1__Javan242_0002__00050

Identity

Accession:
MK448882 ↗
Kingdom:
phage

Quality

91.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan242

TaxID: 2548066

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 143-208
PDB
Domain cluster: rep: MN534320.1__QGJ84704.1__X__00008__D78-145
D2 medium residues 37-142
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.58 42.0 3.96e-01 76.4% 85.6%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.54 32.0 3.15e-01 77.4% 52.5%
8adlB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.85e-01 80.2% 42.8%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.53e-01 88.7% 67.2%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.51 41.0 2.93e-01 89.6% 44.7%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5071985 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.21e-01 78.3% 55.7%
1169089 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.51 38.0 2.77e-01 80.2% 40.8%
3859059 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.51 36.0 3.87e-01 72.6% 88.9%