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MK448887.1__QBX25460.1__Javan258_0053__00007

Bact-Vir

MK448887.1__QBX25460.1__Javan258_0053__00007

Identity

Accession:
MK448887 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan258

TaxID: 2548076

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-74
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hyjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 43.0 3.41e-01 86.4% 54.4%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.55 43.0 4.16e-01 90.9% 97.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3516444 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.68 49.0 4.80e-01 75.8% 77.1%
4297295 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.63 46.0 4.48e-01 78.8% 96.0%
3275441 3722.1.1.1 ↗ alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 0.62 46.0 2.99e-01 81.8% 34.5%
3409412 101.1.10.19 ↗ alpha arrays › HTH › HTH › Cyclin-like › ORC6_2nd 0.54 39.0 3.53e-01 78.8% 92.6%
5062917 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 46.0 3.72e-01 100.0% 70.0%