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MK448889.1__QBX25532.1__Javan262_0017__00017

Bact-Vir

MK448889.1__QBX25532.1__Javan262_0017__00017

Identity

Accession:
MK448889 ↗
Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-63
PDB
Domain cluster: representative
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fiwA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.84 75.0 5.46e-01 100.0% 58.3%
3govB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 74.0 5.36e-01 100.0% 64.2%
1a5iA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 73.0 5.37e-01 100.0% 55.1%
2as9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 73.0 5.72e-01 100.0% 58.5%
1ekbB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 74.0 5.51e-01 100.0% 61.5%
1orfA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 73.0 5.50e-01 100.0% 58.1%
1shyA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 73.0 5.56e-01 100.0% 58.8%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.81 68.0 5.27e-01 93.5% 48.0%
5dj7A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 72.0 5.43e-01 100.0% 57.4%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.80 71.0 5.92e-01 100.0% 69.6%
2pp6A02 2.40.10.210 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) 0.80 67.0 6.01e-01 100.0% 68.3%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.78 69.0 5.10e-01 100.0% 47.0%
1a7sA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 69.0 5.25e-01 100.0% 57.1%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 68.0 5.18e-01 100.0% 56.1%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 67.0 5.36e-01 100.0% 62.4%
3gs9A01 6.20.110.10 Special › Other non-globular › Thrombin, subunit H › 0.76 64.0 5.39e-01 97.8% 55.7%
1ltoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 66.0 5.00e-01 100.0% 57.8%
1zboA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.76 66.0 4.95e-01 100.0% 61.9%
4l8jA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.75 66.0 5.21e-01 100.0% 57.9%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.75 67.0 4.47e-01 100.0% 55.2%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 63.0 4.96e-01 100.0% 58.4%
2ahmH02 3.30.70.3540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain 0.73 65.0 5.15e-01 100.0% 67.7%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 57.0 5.03e-01 87.0% 60.9%
3prbA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.73 60.0 6.11e-01 100.0% 95.5%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.11e-01 87.0% 66.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 56.0 5.05e-01 87.0% 65.1%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.71 47.0 4.13e-01 89.1% 44.4%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 52.0 4.72e-01 87.0% 58.5%
4gaaA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.70 50.0 3.32e-01 100.0% 18.7%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 56.0 4.58e-01 100.0% 48.9%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 50.0 4.31e-01 82.6% 50.7%
2gj2A00 3.30.70.2070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › VP9 protein domain 0.65 54.0 4.57e-01 100.0% 55.7%
3fawA01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 55.0 4.51e-01 100.0% 53.3%
3ibjA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.64 52.0 3.67e-01 100.0% 50.6%
3c8cB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 51.0 3.88e-01 100.0% 52.0%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.63 53.0 4.11e-01 100.0% 44.3%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.62 44.0 3.14e-01 76.1% 85.6%
4s2rQ03 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.62 50.0 3.16e-01 100.0% 36.7%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 52.0 4.22e-01 100.0% 79.6%
3ttgA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.61 50.0 3.08e-01 100.0% 13.6%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.61 51.0 3.66e-01 100.0% 35.8%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 49.0 3.68e-01 100.0% 35.5%
4h4kA01 3.30.70.2940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 53.0 4.29e-01 100.0% 59.6%
3h9wA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 49.0 3.86e-01 100.0% 89.0%
3sz6A00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 3.58e-01 100.0% 37.1%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 44.0 3.63e-01 100.0% 87.5%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.58 46.0 4.01e-01 100.0% 60.2%
6vbkA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.58 47.0 3.76e-01 100.0% 64.0%
1v05A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 3.85e-01 100.0% 46.9%
2b9kA00 2.20.20.70 Mainly Beta › Single Sheet › Anthopleurin-A › 0.57 42.0 4.24e-01 97.8% 89.4%
2zo4A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.56 48.0 3.05e-01 100.0% 59.1%
4labA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.56 46.0 3.18e-01 100.0% 26.2%
2apoA03 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 3.65e-01 100.0% 60.9%
1g3pA02 3.90.450.1 Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 0.55 44.0 3.60e-01 100.0% 48.1%
2ausC02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.55 42.0 3.03e-01 100.0% 28.6%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 46.0 2.86e-01 100.0% 17.8%
2iw3A05 2.40.50.990 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 41.0 3.15e-01 82.6% 45.0%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.55 45.0 2.85e-01 100.0% 18.7%
1xm8A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 45.0 2.92e-01 100.0% 42.1%
4ad9A01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 43.0 2.95e-01 100.0% 69.6%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.54 41.0 2.97e-01 95.7% 70.3%
2mn5A00 3.30.30.140 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.54 40.0 3.88e-01 91.3% 87.5%
1g87A02 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.53 44.0 3.16e-01 100.0% 32.7%
4g26A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 43.0 2.73e-01 100.0% 19.3%
1tolA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.52 46.0 3.81e-01 100.0% 57.3%
2x9aA00 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.52 45.0 4.14e-01 100.0% 73.8%
1zkpC00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 41.0 2.68e-01 100.0% 45.3%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4260208 1.1.13.62 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF27197 0.86 79.0 5.89e-01 100.0% 46.7%
4032883 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.84 76.0 5.73e-01 100.0% 45.7%
2642578 1.1.13.3 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.82 72.0 5.44e-01 100.0% 45.5%
4092486 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.82 63.0 4.19e-01 100.0% 21.7%
4669352 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 67.0 5.03e-01 100.0% 38.2%
4042581 4.1.1.161 beta barrels › SH3 › SH3 › SH3 › DUF4178 0.82 63.0 4.23e-01 82.6% 25.8%
3975275 1.1.13.15 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 0.82 69.0 5.38e-01 100.0% 45.3%
3535535 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 73.0 4.51e-01 100.0% 25.3%
3555476 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 73.0 4.47e-01 100.0% 24.0%
3394788 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 71.0 4.43e-01 100.0% 26.7%
3058418 1.1.13.2 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach 0.80 70.0 5.43e-01 100.0% 45.1%
3890483 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 69.0 4.30e-01 100.0% 24.1%
4943219 205.1.1.123 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD 0.78 68.0 4.71e-01 100.0% 32.9%
5049368 205.1.1.1 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 0.78 67.0 4.71e-01 100.0% 34.0%
3393350 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 68.0 4.40e-01 100.0% 23.9%
3286392 1.1.16.1 beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD 0.77 67.0 4.80e-01 100.0% 34.6%
3290365 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 67.0 4.95e-01 100.0% 46.7%
2736875 1.1.16.1 beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD 0.75 65.0 4.26e-01 100.0% 23.3%
3306779 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.75 60.0 5.33e-01 87.0% 63.1%
3416144 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.75 65.0 4.25e-01 100.0% 22.4%
3279326 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 65.0 5.26e-01 100.0% 81.1%
3216247 1.1.7.25 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN 0.75 65.0 5.25e-01 100.0% 52.2%
3251994 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.74 55.0 3.94e-01 91.3% 28.7%
3389168 4081.1.1.5 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N 0.74 63.0 4.16e-01 100.0% 23.9%
5042402 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.73 63.0 5.83e-01 100.0% 88.3%
4863266 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.72 54.0 4.79e-01 87.0% 56.9%
4047545 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 61.0 4.27e-01 100.0% 38.1%
4176978 1.1.9.5 beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.72 62.0 3.94e-01 100.0% 29.2%
4931072 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.72 57.0 4.93e-01 87.0% 60.0%
5047208 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.72 59.0 5.56e-01 100.0% 76.4%
3624495 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.71 53.0 3.14e-01 84.8% 11.0%
4913414 1.1.16.0 beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain 0.71 61.0 4.67e-01 100.0% 42.5%
4889079 1.1.16.1 beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD 0.71 61.0 4.67e-01 100.0% 42.5%
4051625 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.71 55.0 4.96e-01 87.0% 63.1%
4329871 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 60.0 4.00e-01 100.0% 24.7%
3235142 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.70 52.0 3.08e-01 87.0% 10.4%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.70 60.0 4.02e-01 100.0% 25.6%
3891158 1.1.7.90 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 0.70 60.0 4.53e-01 100.0% 51.3%
3483489 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 54.0 4.60e-01 87.0% 56.0%
5022325 239.1.1.15 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.68 58.0 4.62e-01 100.0% 67.0%
3491527 11.1.1.629 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4517 0.68 58.0 4.26e-01 100.0% 44.6%
3643549 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.68 53.0 4.43e-01 87.0% 52.5%
3961655 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.67 59.0 4.55e-01 100.0% 51.0%
591 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.67 50.0 4.29e-01 82.6% 50.0%
3261290 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.67 58.0 4.27e-01 100.0% 40.8%
4651626 11.1.1.171 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 0.66 55.0 4.46e-01 100.0% 51.0%
5054413 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.65 54.0 4.27e-01 97.8% 73.8%
4974179 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 53.0 4.19e-01 100.0% 59.1%
3250648 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.65 52.0 4.26e-01 100.0% 59.0%
3249705 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 52.0 4.41e-01 100.0% 54.4%
4587522 1.1.7.11 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.65 53.0 4.37e-01 100.0% 52.6%
3172535 304.9.1.126 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF29325 0.64 56.0 4.39e-01 100.0% 62.0%
3435375 60.1.1.10 beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › PF28898 0.63 51.0 3.87e-01 100.0% 47.7%
3929899 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 52.0 3.97e-01 100.0% 55.0%
3575428 304.9.1.36 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_10 0.62 53.0 4.15e-01 100.0% 44.8%
3675176 223.1.1.28 a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N 0.62 51.0 3.69e-01 100.0% 70.7%
3894561 221.1.2.16 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › MTRES1_C 0.61 50.0 4.07e-01 100.0% 93.0%
4940409 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.61 52.0 4.42e-01 100.0% 68.8%
3835364 3938.1.1.3 alpha arrays › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › Heterogeneous nuclear ribonucleoprotein Q acidic domain › PF26252 0.61 49.0 3.26e-01 100.0% 34.2%
4929255 11.1.1.65 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CopC 0.60 49.0 3.86e-01 100.0% 46.4%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.60 46.0 3.14e-01 100.0% 20.9%
4012542 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 51.0 3.15e-01 100.0% 19.7%
3396193 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 51.0 3.78e-01 100.0% 50.8%
3232202 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 49.0 3.61e-01 100.0% 45.7%
4658510 375.14.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) 0.59 33.0 3.52e-01 71.7% 57.5%
4031443 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.58 48.0 3.05e-01 97.8% 17.6%
4364215 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 45.0 3.55e-01 97.8% 89.2%
185983 6012.1.1.1 few secondary structure elements › Antimicrobial peptide LCI › Antimicrobial peptide LCI › Antimicrobial peptide LCI › lci 0.57 42.0 4.24e-01 97.8% 89.4%
3262549 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.56 43.0 2.95e-01 100.0% 20.0%
4077036 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.56 48.0 3.13e-01 100.0% 21.8%
3404842 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.56 45.0 2.86e-01 100.0% 15.7%
4025731 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.55 42.0 3.01e-01 100.0% 26.8%
4473668 304.102.1.1 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 0.55 45.0 3.18e-01 100.0% 29.4%
3505584 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.54 45.0 2.83e-01 100.0% 17.8%
3714409 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 44.0 3.22e-01 100.0% 55.3%
3975892 64.3.1.0 beta meanders › WW domain-like › Carbohydrate binding domain › Carbohydrate binding domain 0.54 43.0 4.10e-01 89.1% 89.1%
2499603 244.1.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO 0.54 42.0 3.43e-01 100.0% 44.6%
4275176 304.102.1.5 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 0.51 39.0 2.70e-01 100.0% 20.4%
3519410 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.51 37.0 3.79e-01 84.8% 100.0%
3502375 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.50 41.0 4.17e-01 95.7% 93.3%
3610062 3850.1.1.0 few secondary structure elements › Protein-only RNase P Zn-binding domain › Protein-only RNase P Zn-binding domain › Protein-only RNase P Zn-binding domain 0.50 40.0 3.64e-01 97.8% 92.9%