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MK448895.1__QBX25797.1__Javan274_0001__00052
Bact-VirMK448895.1__QBX25797.1__Javan274_0001__00052
Identity
- Accession:
- MK448895 ↗
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 254-330
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07501.18 best | G5 | 31.9 | 1.80e-07 | 98.7% | 98.7% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tipA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.75 | 68.0 | 5.64e-01 | 100.0% | 58.3% |
| 4fumA01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.74 | 62.0 | 6.38e-01 | 96.1% | 97.3% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.69 | 35.0 | 3.91e-01 | 85.7% | 61.7% |
| 4e72A01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.68 | 39.0 | 3.34e-01 | 90.9% | 34.7% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.68 | 36.0 | 4.07e-01 | 85.7% | 66.1% |
| 4fzqA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.68 | 58.0 | 5.81e-01 | 98.7% | 92.4% |
| 1kiaA01 | 3.30.46.10 | Alpha Beta › 2-Layer Sandwich › Glycine N-methyltransferase; chain A, domain 1 › Glycine N-methyltransferase, chain A, domain 1 | 0.68 | 40.0 | 3.96e-01 | 84.4% | 54.2% |
| 4z9cB00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 37.0 | 3.26e-01 | 88.3% | 36.5% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.67 | 37.0 | 2.92e-01 | 85.7% | 25.5% |
| 6r2nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 38.0 | 3.14e-01 | 97.4% | 32.1% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.64 | 44.0 | 3.57e-01 | 96.1% | 36.1% |
| 2ltjA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.64 | 54.0 | 4.87e-01 | 100.0% | 66.7% |
| 2dslA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.63 | 34.0 | 3.00e-01 | 90.9% | 33.9% |
| 2pzhA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 39.0 | 3.25e-01 | 90.9% | 35.8% |
| 3f6gA02 | 3.30.160.340 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 34.0 | 3.76e-01 | 85.7% | 66.7% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.61 | 50.0 | 3.71e-01 | 97.4% | 35.2% |
| 7a0hA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.59 | 38.0 | 2.97e-01 | 92.2% | 28.7% |
| 2r76A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.58 | 41.0 | 3.50e-01 | 94.8% | 43.2% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 34.0 | 3.05e-01 | 88.3% | 39.3% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 37.0 | 3.33e-01 | 85.7% | 45.9% |
| 4n4rB00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.56 | 40.0 | 3.31e-01 | 97.4% | 39.1% |
| 2q0yA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 35.0 | 2.93e-01 | 88.3% | 35.5% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.55 | 46.0 | 3.05e-01 | 93.5% | 36.0% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 33.0 | 3.31e-01 | 84.4% | 58.0% |
| 1z6bA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 29.0 | 2.43e-01 | 84.4% | 26.8% |
| 1yliB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 34.0 | 2.87e-01 | 92.2% | 33.8% |
| 3bghB01 | 3.30.160.180 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain | 0.52 | 40.0 | 3.24e-01 | 100.0% | 39.8% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.52 | 42.0 | 3.16e-01 | 90.9% | 75.0% |
| 3eo5A01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.52 | 43.0 | 4.15e-01 | 90.9% | 78.4% |
| 7neaA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.50 | 40.0 | 3.45e-01 | 85.7% | 78.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3451695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.82 | 44.0 | 4.20e-01 | 85.7% | 45.6% |
| 4031475 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.76 | 66.0 | 4.21e-01 | 97.4% | 20.3% |
| 4209937 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.72 | 63.0 | 6.40e-01 | 100.0% | 98.7% |
| 4055918 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.72 | 62.0 | 6.33e-01 | 100.0% | 98.7% |
| 4071921 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.71 | 59.0 | 4.78e-01 | 97.4% | 47.3% |
| 3017364 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.71 | 40.0 | 2.76e-01 | 85.7% | 16.2% |
| 2583528 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.71 | 60.0 | 5.89e-01 | 100.0% | 88.1% |
| 4618992 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.70 | 62.0 | 4.33e-01 | 97.4% | 31.2% |
| 3027346 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.70 | 62.0 | 5.28e-01 | 100.0% | 82.8% |
| 4525357 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.69 | 59.0 | 4.88e-01 | 100.0% | 52.9% |
| 866038 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.68 | 58.0 | 5.81e-01 | 98.7% | 92.4% |
| 4132478 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.68 | 61.0 | 5.69e-01 | 100.0% | 81.1% |
| 3301111 | 331.3.1.25 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PaO | 0.66 | 41.0 | 3.41e-01 | 89.6% | 35.6% |
| 3989763 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.65 | 54.0 | 4.43e-01 | 100.0% | 49.3% |
| 1682689 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.64 | 54.0 | 5.37e-01 | 100.0% | 90.2% |
| 3359635 | 274.1.1.44 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF7804 | 0.64 | 42.0 | 3.76e-01 | 89.6% | 47.3% |
| 2780879 | 1172.1.1.1 ↗ | beta barrels › UL131A-like › UL130 C-terminal domain › UL130 C-terminal domain › Gp_UL130 | 0.64 | 43.0 | 3.86e-01 | 89.6% | 48.6% |
| 4021107 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 34.0 | 2.39e-01 | 87.0% | 17.1% |
| 1720136 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.59 | 36.0 | 4.10e-01 | 88.3% | 87.0% |
| 3699016 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.58 | 51.0 | 3.14e-01 | 97.4% | 31.2% |
| 4942841 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 34.0 | 3.04e-01 | 85.7% | 39.1% |
| 4460236 | 2484.1.1.232 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › EutA | 0.58 | 39.0 | 3.13e-01 | 92.2% | 34.2% |
| 2135304 | 11.1.1.166 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FctA | 0.55 | 41.0 | 3.55e-01 | 92.2% | 50.8% |
| 3596299 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 41.0 | 3.69e-01 | 88.3% | 58.1% |
| 4547123 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.55 | 43.0 | 4.55e-01 | 88.3% | 94.3% |
| 4662006 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.54 | 44.0 | 3.78e-01 | 92.2% | 82.3% |
| 3577548 | 331.12.1.0 ↗ | a+b two layers › TBP-like › YugN-like › YugN-like | 0.53 | 34.0 | 3.08e-01 | 92.2% | 43.4% |
| 3786082 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.53 | 39.0 | 2.62e-01 | 80.5% | 79.8% |
| 3543052 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.53 | 42.0 | 3.77e-01 | 92.2% | 60.9% |
| 4241552 | 7504.1.1.3 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Maf | 0.53 | 44.0 | 3.27e-01 | 92.2% | 37.0% |
| 185213 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.52 | 43.0 | 4.29e-01 | 90.9% | 85.2% |
| 3768529 | 11.1.1.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD | 0.52 | 41.0 | 3.62e-01 | 92.2% | 58.3% |
| 3994597 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.51 | 43.0 | 2.95e-01 | 92.2% | 52.7% |
| 3366570 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.31e-01 | 88.3% | 54.5% |
D2
high
residues 336-412
Domain cluster:
rep: MK448895.1__QBX25797.1__Javan274_0001__00052__D254-330
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07501.18 best | G5 | 84.9 | 4.90e-24 | 97.4% | 97.3% |
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fzqA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.86 | 77.0 | 7.70e-01 | 98.7% | 94.9% |
| 4fumA01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.78 | 69.0 | 7.06e-01 | 94.8% | 100.0% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.76 | 41.0 | 2.91e-01 | 87.0% | 18.4% |
| 2k54A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.74 | 46.0 | 3.89e-01 | 88.3% | 39.0% |
| 2lyxA00 | 3.10.450.390 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 | 0.74 | 43.0 | 4.10e-01 | 85.7% | 50.6% |
| 4nspA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.72 | 40.0 | 2.80e-01 | 88.3% | 17.6% |
| 3tipA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.71 | 65.0 | 5.43e-01 | 100.0% | 61.4% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 37.0 | 3.11e-01 | 84.4% | 31.5% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.69 | 37.0 | 2.91e-01 | 85.7% | 25.2% |
| 1tuhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 40.0 | 3.37e-01 | 85.7% | 35.1% |
| 3akoC00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.64 | 39.0 | 3.15e-01 | 89.6% | 30.9% |
| 2ltjA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.64 | 55.0 | 4.93e-01 | 97.4% | 67.6% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 39.0 | 3.35e-01 | 85.7% | 37.6% |
| 4h3uA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 43.0 | 3.65e-01 | 89.6% | 41.5% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 35.0 | 3.59e-01 | 85.7% | 53.9% |
| 4dduA07 | 2.60.510.20 | Mainly Beta › Sandwich › EV matrix protein fold › | 0.63 | 40.0 | 3.57e-01 | 88.3% | 45.8% |
| 1of5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 40.0 | 3.22e-01 | 87.0% | 33.1% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 40.0 | 3.33e-01 | 87.0% | 38.2% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 41.0 | 3.47e-01 | 90.9% | 40.9% |
| 3eehA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 36.0 | 3.18e-01 | 83.1% | 39.7% |
| 4k02A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 37.0 | 3.22e-01 | 87.0% | 37.8% |
| 3eo5A01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.60 | 50.0 | 4.83e-01 | 92.2% | 81.8% |
| 3h9wA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 36.0 | 3.24e-01 | 84.4% | 43.1% |
| 1s5aB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 38.0 | 3.10e-01 | 87.0% | 35.7% |
| 3f9sB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 44.0 | 3.60e-01 | 90.9% | 44.7% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 37.0 | 3.20e-01 | 84.4% | 38.9% |
| 1yliB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.57 | 36.0 | 2.92e-01 | 84.4% | 32.4% |
| 4lgqA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 42.0 | 3.55e-01 | 89.6% | 45.9% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 37.0 | 2.37e-01 | 87.0% | 11.6% |
| 3ff0A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.28e-01 | 89.6% | 39.7% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.55 | 45.0 | 4.11e-01 | 89.6% | 95.1% |
| 4ienA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 38.0 | 3.05e-01 | 89.6% | 37.7% |
| 3f7xA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 40.0 | 3.34e-01 | 89.6% | 45.9% |
| 3ewkA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 33.0 | 3.05e-01 | 84.4% | 45.6% |
| 3kkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.31e-01 | 92.2% | 43.8% |
| 4hoiB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 32.0 | 2.84e-01 | 83.1% | 40.4% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 32.0 | 2.70e-01 | 83.1% | 35.7% |
| 4n6qA00 | 2.60.40.3960 | Mainly Beta › Sandwich › Immunoglobulin-like › Velvet domain | 0.52 | 43.0 | 3.21e-01 | 87.0% | 49.4% |
| 1t70A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 38.0 | 2.74e-01 | 80.5% | 99.6% |
| 4hrvA00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.51 | 32.0 | 2.67e-01 | 85.7% | 33.8% |
| 2oq8A00 | 2.60.40.2930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.36e-01 | 90.9% | 62.0% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989719 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.97 | 54.0 | 7.17e-01 | 88.3% | 97.8% |
| 4055918 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.96 | 89.0 | 9.11e-01 | 97.4% | 100.0% |
| 4525357 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.89 | 81.0 | 6.41e-01 | 96.1% | 52.9% |
| 866038 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.86 | 77.0 | 7.70e-01 | 98.7% | 94.9% |
| 4132478 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.83 | 77.0 | 7.11e-01 | 100.0% | 92.6% |
| 3883050 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.82 | 43.0 | 2.87e-01 | 85.7% | 15.1% |
| 4031475 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.78 | 71.0 | 4.49e-01 | 97.4% | 21.4% |
| 4209937 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.77 | 68.0 | 6.93e-01 | 98.7% | 100.0% |
| 3027346 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.77 | 70.0 | 5.80e-01 | 97.4% | 82.0% |
| 4056450 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.76 | 52.0 | 6.04e-01 | 90.9% | 100.0% |
| 3205088 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.74 | 44.0 | 3.77e-01 | 88.3% | 38.3% |
| 3494737 | 7505.1.1.1 ↗ | a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg | 0.73 | 45.0 | 4.33e-01 | 85.7% | 55.3% |
| 4547123 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.72 | 59.0 | 6.15e-01 | 90.9% | 100.0% |
| 4618992 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.72 | 63.0 | 4.34e-01 | 93.5% | 30.8% |
| 4071921 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.71 | 65.0 | 5.10e-01 | 100.0% | 50.0% |
| 3583345 | 5.1.4.288 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › APEH_N | 0.71 | 46.0 | 2.85e-01 | 85.7% | 11.6% |
| 3354564 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 37.0 | 4.11e-01 | 76.6% | 63.3% |
| 3271615 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.69 | 42.0 | 2.63e-01 | 88.3% | 10.7% |
| 3908974 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 43.0 | 3.15e-01 | 88.3% | 25.6% |
| 3961916 | 243.1.1.10 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL | 0.67 | 41.0 | 3.58e-01 | 84.4% | 40.9% |
| 4438791 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.66 | 40.0 | 4.83e-01 | 84.4% | 94.0% |
| 5023826 | 2484.1.1.122 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2209 | 0.66 | 42.0 | 3.53e-01 | 87.0% | 39.2% |
| 1682689 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.64 | 55.0 | 5.41e-01 | 97.4% | 91.5% |
| 3925547 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.64 | 37.0 | 2.75e-01 | 84.4% | 22.6% |
| 2583528 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.64 | 57.0 | 5.57e-01 | 100.0% | 97.6% |
| 3356242 | 243.3.1.45 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › TIN1 | 0.63 | 45.0 | 4.15e-01 | 81.8% | 58.0% |
| 3989884 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.63 | 47.0 | 5.23e-01 | 77.9% | 100.0% |
| 3368394 | 4325.1.1.11 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF27041 | 0.62 | 37.0 | 3.49e-01 | 84.4% | 47.4% |
| 3710606 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.62 | 41.0 | 3.43e-01 | 88.3% | 39.3% |
| 3989763 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.61 | 53.0 | 4.29e-01 | 97.4% | 50.0% |
| 4564292 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.61 | 32.0 | 2.83e-01 | 83.1% | 32.2% |
| 3727183 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 39.0 | 2.70e-01 | 89.6% | 20.0% |
| 185213 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.60 | 50.0 | 4.98e-01 | 92.2% | 88.9% |
| 1887056 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 40.0 | 3.47e-01 | 88.3% | 44.2% |
| 4460236 | 2484.1.1.232 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › EutA | 0.59 | 42.0 | 3.45e-01 | 94.8% | 38.1% |
| 3945792 | 3953.1.1.2 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N2 | 0.58 | 49.0 | 4.32e-01 | 88.3% | 75.2% |
| 4580567 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.57 | 44.0 | 4.17e-01 | 81.8% | 72.2% |
| 3621160 | 7505.1.1.1 ↗ | a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg | 0.57 | 34.0 | 3.30e-01 | 79.2% | 51.8% |
| 3685936 | 11.1.1.150 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Velvet | 0.57 | 46.0 | 3.41e-01 | 87.0% | 50.0% |
| None | — | 0.56 | 34.0 | 2.18e-01 | 88.3% | 11.4% | |
| 3507768 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 41.0 | 3.80e-01 | 83.1% | 61.0% |
| 4927158 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 45.0 | 2.71e-01 | 88.3% | 21.2% |
| 3645698 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 32.0 | 2.51e-01 | 84.4% | 23.9% |
| 3615383 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.55 | 47.0 | 3.62e-01 | 94.8% | 45.7% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.53 | 36.0 | 2.89e-01 | 92.2% | 31.8% |
| 3347628 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 31.0 | 2.22e-01 | 84.4% | 16.9% |
| 3199843 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 46.0 | 2.97e-01 | 96.1% | 44.3% |
| 3704007 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.52 | 35.0 | 2.59e-01 | 88.3% | 23.4% |
| 4662006 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.52 | 43.0 | 3.72e-01 | 97.4% | 60.0% |
| 4218521 | 5.1.3.22 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › GSDH | 0.52 | 43.0 | 2.73e-01 | 89.6% | 20.5% |
| 170705 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.51 | 33.0 | 3.04e-01 | 87.0% | 47.6% |
| 5043731 | 2484.1.1.122 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2209 | 0.51 | 42.0 | 3.51e-01 | 89.6% | 96.9% |
D3
medium
residues 113-189
Domain cluster:
representative
CATH (63)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.82 | 71.0 | 6.88e-01 | 93.5% | 97.6% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.81 | 70.0 | 7.08e-01 | 92.2% | 94.7% |
| 2rkkA01 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.81 | 70.0 | 5.47e-01 | 93.5% | 48.7% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.80 | 69.0 | 6.53e-01 | 94.8% | 94.6% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.80 | 67.0 | 6.77e-01 | 90.9% | 92.0% |
| 3zc0D00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 71.0 | 5.31e-01 | 100.0% | 80.7% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.79 | 51.0 | 6.07e-01 | 77.9% | 98.1% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.79 | 68.0 | 6.17e-01 | 94.8% | 92.2% |
| 2gnxA01 | 1.10.3450.30 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › | 0.78 | 72.0 | 5.38e-01 | 100.0% | 92.7% |
| 1wfdA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.78 | 63.0 | 5.89e-01 | 87.0% | 72.0% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.77 | 62.0 | 5.41e-01 | 93.5% | 57.8% |
| 5o5jT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.77 | 65.0 | 6.30e-01 | 94.8% | 82.4% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.77 | 64.0 | 5.43e-01 | 90.9% | 59.5% |
| 2ra1A02 | 1.20.58.780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 57.0 | 6.05e-01 | 79.2% | 100.0% |
| 1j5wA02 | 1.20.58.180 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 | 0.77 | 64.0 | 6.44e-01 | 90.9% | 90.9% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 53.0 | 4.80e-01 | 90.9% | 52.8% |
| 3ieeA02 | 1.20.58.820 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Uncharacterised protein PF12889, C-terminal DUF3829 | 0.76 | 69.0 | 6.24e-01 | 100.0% | 95.1% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.76 | 64.0 | 5.52e-01 | 93.5% | 93.4% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.76 | 65.0 | 5.91e-01 | 94.8% | 91.3% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.76 | 63.0 | 5.74e-01 | 90.9% | 69.9% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.76 | 60.0 | 6.09e-01 | 85.7% | 90.5% |
| 2v0cA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.76 | 68.0 | 5.35e-01 | 100.0% | 56.0% |
| 4m7cB00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.76 | 69.0 | 5.05e-01 | 100.0% | 91.4% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.76 | 62.0 | 6.06e-01 | 90.9% | 90.6% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.76 | 67.0 | 5.07e-01 | 100.0% | 79.6% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 60.0 | 5.51e-01 | 87.0% | 84.2% |
| 2i0mA02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.75 | 63.0 | 5.79e-01 | 93.5% | 90.1% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 66.0 | 5.17e-01 | 96.1% | 60.1% |
| 2qr4A01 | 1.20.140.70 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Oligopeptidase f, N-terminal domain | 0.75 | 67.0 | 5.31e-01 | 100.0% | 86.5% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.75 | 64.0 | 5.90e-01 | 93.5% | 85.9% |
| 5gl7A01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.74 | 67.0 | 5.19e-01 | 100.0% | 64.5% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.74 | 63.0 | 5.50e-01 | 94.8% | 76.7% |
| 1ug7A00 | 1.20.120.360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Axin interactor, dorsalization-associated protein, N-terminal domain | 0.73 | 63.0 | 5.44e-01 | 100.0% | 85.9% |
| 2b1eA01 | 1.20.58.1150 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 59.0 | 5.75e-01 | 89.6% | 81.4% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.73 | 61.0 | 5.70e-01 | 93.5% | 74.2% |
| 4aifA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 62.0 | 5.03e-01 | 94.8% | 66.0% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.72 | 59.0 | 5.26e-01 | 89.6% | 78.0% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 61.0 | 5.48e-01 | 93.5% | 90.6% |
| 1wkbA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.72 | 64.0 | 5.52e-01 | 100.0% | 70.2% |
| 2gscC00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.71 | 59.0 | 5.33e-01 | 93.5% | 73.6% |
| 2l3lA01 | 1.20.58.1250 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain | 0.71 | 60.0 | 5.45e-01 | 94.8% | 70.8% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.70 | 58.0 | 5.64e-01 | 93.5% | 89.4% |
| 3rkvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 57.0 | 4.60e-01 | 88.3% | 62.6% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 58.0 | 5.06e-01 | 93.5% | 76.7% |
| 4yvoA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 58.0 | 5.03e-01 | 90.9% | 73.9% |
| 1rqgA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.68 | 59.0 | 4.85e-01 | 100.0% | 66.9% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 59.0 | 4.29e-01 | 97.4% | 42.9% |
| 1elrA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.66 | 56.0 | 4.72e-01 | 92.2% | 63.3% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.65 | 56.0 | 4.99e-01 | 96.1% | 92.0% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.65 | 53.0 | 4.85e-01 | 93.5% | 76.9% |
| 2x1lA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.65 | 53.0 | 4.19e-01 | 93.5% | 67.4% |
| 2wwxB00 | 1.20.1260.70 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.65 | 60.0 | 4.34e-01 | 100.0% | 59.0% |
| 3jz0A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 59.0 | 4.90e-01 | 100.0% | 93.8% |
| 2vq2A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 55.0 | 3.86e-01 | 90.9% | 50.9% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.64 | 58.0 | 4.84e-01 | 100.0% | 72.2% |
| 1yw0A00 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 57.0 | 4.00e-01 | 97.4% | 82.7% |
| 3ggyA00 | 1.20.1260.60 | Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1 | 0.64 | 54.0 | 4.03e-01 | 90.9% | 90.3% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.64 | 58.0 | 4.99e-01 | 100.0% | 87.4% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.62 | 56.0 | 4.84e-01 | 100.0% | 81.4% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 49.0 | 5.15e-01 | 85.7% | 100.0% |
| 5fzsA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 50.0 | 4.46e-01 | 96.1% | 78.5% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 50.0 | 4.28e-01 | 100.0% | 89.7% |
| 2kj8A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 44.0 | 3.87e-01 | 98.7% | 90.7% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029773 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.84 | 66.0 | 6.79e-01 | 89.6% | 87.8% |
| 3270441 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.83 | 69.0 | 7.06e-01 | 89.6% | 92.0% |
| 3724271 | 109.4.1.757 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › VPS51_Exo84_N | 0.82 | 70.0 | 4.06e-01 | 92.2% | 11.4% |
| 3883622 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.82 | 67.0 | 6.84e-01 | 88.3% | 90.7% |
| 3267491 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.82 | 65.0 | 6.82e-01 | 85.7% | 94.3% |
| 3418094 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.82 | 64.0 | 6.33e-01 | 83.1% | 80.0% |
| 3527051 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.82 | 70.0 | 6.55e-01 | 93.5% | 80.0% |
| 3245731 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.81 | 70.0 | 6.96e-01 | 93.5% | 95.0% |
| 3686751 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.81 | 64.0 | 6.35e-01 | 84.4% | 81.2% |
| 165995 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.81 | 70.0 | 7.08e-01 | 92.2% | 94.7% |
| 4999686 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.81 | 68.0 | 6.92e-01 | 90.9% | 93.3% |
| 3499075 | 109.4.1.445 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps54_N | 0.81 | 64.0 | 3.88e-01 | 92.2% | 13.5% |
| 4159500 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.81 | 67.0 | 6.48e-01 | 89.6% | 81.2% |
| 4929706 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.81 | 66.0 | 6.89e-01 | 87.0% | 95.7% |
| 5076876 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.81 | 63.0 | 6.23e-01 | 83.1% | 80.0% |
| 3371182 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 68.0 | 6.14e-01 | 92.2% | 81.0% |
| 3407072 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 69.0 | 6.86e-01 | 93.5% | 95.0% |
| 3402139 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.80 | 68.0 | 6.61e-01 | 93.5% | 83.5% |
| 4947260 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 65.0 | 6.42e-01 | 87.0% | 83.7% |
| 5032368 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.80 | 63.0 | 6.78e-01 | 84.4% | 100.0% |
| 4933335 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.80 | 65.0 | 6.48e-01 | 88.3% | 86.3% |
| 3465154 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 68.0 | 4.31e-01 | 92.2% | 46.9% |
| 4978312 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.80 | 63.0 | 6.54e-01 | 84.4% | 92.9% |
| 3186889 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.80 | 66.0 | 6.20e-01 | 90.9% | 73.7% |
| 3716154 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.79 | 68.0 | 6.77e-01 | 93.5% | 93.8% |
| 4074824 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.79 | 66.0 | 6.05e-01 | 90.9% | 70.0% |
| 3250965 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.79 | 71.0 | 5.68e-01 | 97.4% | 68.3% |
| 3829016 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.79 | 68.0 | 5.75e-01 | 93.5% | 68.8% |
| 3252144 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.79 | 64.0 | 6.64e-01 | 87.0% | 95.7% |
| 4940283 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.79 | 71.0 | 5.35e-01 | 100.0% | 81.0% |
| 4933622 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.79 | 66.0 | 6.09e-01 | 92.2% | 89.0% |
| 3272556 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.79 | 66.0 | 4.89e-01 | 92.2% | 36.4% |
| 4944331 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.79 | 70.0 | 5.30e-01 | 98.7% | 84.4% |
| 3884438 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.79 | 62.0 | 6.19e-01 | 85.7% | 82.5% |
| 5023839 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.79 | 71.0 | 5.19e-01 | 100.0% | 77.5% |
| 4943123 | 604.12.1.134 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › AAA | 0.79 | 67.0 | 6.46e-01 | 92.2% | 84.7% |
| 4972182 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.79 | 61.0 | 6.35e-01 | 83.1% | 91.4% |
| 3879426 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.79 | 67.0 | 6.54e-01 | 93.5% | 88.0% |
| 3773235 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.78 | 67.0 | 6.35e-01 | 93.5% | 80.0% |
| 5072045 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.78 | 66.0 | 5.96e-01 | 92.2% | 81.9% |
| 3821159 | 109.4.1.350 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ELYS | 0.78 | 62.0 | 4.51e-01 | 85.7% | 32.4% |
| 5079204 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.78 | 68.0 | 5.06e-01 | 96.1% | 78.9% |
| 5072449 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.78 | 66.0 | 6.27e-01 | 93.5% | 80.0% |
| 3838 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.78 | 63.0 | 5.89e-01 | 87.0% | 72.0% |
| 3505828 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.77 | 66.0 | 5.10e-01 | 94.8% | 71.8% |
| 4002826 | 604.12.1.9 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 | 0.77 | 65.0 | 5.95e-01 | 92.2% | 74.0% |
| 5062167 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.77 | 69.0 | 4.96e-01 | 100.0% | 70.7% |
| 60156 | 109.10.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin | 0.77 | 69.0 | 5.00e-01 | 100.0% | 80.1% |
| 3706056 | 604.22.1.0 ↗ | alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain | 0.77 | 67.0 | 6.46e-01 | 94.8% | 85.9% |
| 4016111 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.76 | 63.0 | 6.45e-01 | 93.5% | 93.3% |
| 3592663 | 604.22.1.0 ↗ | alpha bundles › Spectrin repeat-like › tubulin binding cofactor C N-terminal domain › tubulin binding cofactor C N-terminal domain | 0.76 | 66.0 | 6.07e-01 | 94.8% | 73.0% |
| 5065621 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.76 | 68.0 | 4.94e-01 | 100.0% | 72.1% |
| 4958131 | 109.10.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin | 0.76 | 68.0 | 4.97e-01 | 100.0% | 75.6% |
| 3743018 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.76 | 59.0 | 6.27e-01 | 83.1% | 98.5% |
| 3608758 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.76 | 63.0 | 6.25e-01 | 92.2% | 92.5% |
| 4927814 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.76 | 67.0 | 4.93e-01 | 100.0% | 72.6% |
| 5042787 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.76 | 66.0 | 4.99e-01 | 98.7% | 89.9% |
| 3225484 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.76 | 59.0 | 6.15e-01 | 85.7% | 94.3% |
| 3480252 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.75 | 58.0 | 5.91e-01 | 84.4% | 90.7% |
| 3394532 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 68.0 | 4.96e-01 | 100.0% | 72.2% |
| 5047516 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.75 | 66.0 | 4.87e-01 | 100.0% | 50.7% |
| 3713076 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 64.0 | 5.10e-01 | 93.5% | 80.7% |
| 4586475 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 64.0 | 4.74e-01 | 94.8% | 51.3% |
| 3731082 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.74 | 57.0 | 5.75e-01 | 83.1% | 85.3% |
| 3812592 | 109.4.1.1948 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle | 0.74 | 62.0 | 4.87e-01 | 92.2% | 45.0% |
| 3596608 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.74 | 62.0 | 6.07e-01 | 94.8% | 84.7% |
| 5048081 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.73 | 62.0 | 6.35e-01 | 93.5% | 96.0% |
| 3742136 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.73 | 56.0 | 5.66e-01 | 81.8% | 97.3% |
| 4970290 | 633.10.1.43 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › FIMAH | 0.73 | 58.0 | 5.71e-01 | 93.5% | 79.5% |
| 3267859 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.73 | 65.0 | 6.22e-01 | 98.7% | 98.9% |
| 4015003 | 109.10.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin | 0.72 | 65.0 | 4.49e-01 | 97.4% | 80.8% |
| 3704286 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.72 | 58.0 | 5.32e-01 | 87.0% | 68.0% |
| 4183024 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.72 | 60.0 | 4.89e-01 | 93.5% | 52.7% |
| 3360009 | 109.4.1.1425 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C, PF27696 | 0.72 | 60.0 | 3.55e-01 | 93.5% | 11.9% |
| 3670337 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.72 | 57.0 | 5.43e-01 | 85.7% | 76.7% |
| 3626109 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.72 | 55.0 | 5.77e-01 | 85.7% | 94.3% |
| 4955893 | 109.10.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin › Translin | 0.72 | 63.0 | 4.67e-01 | 100.0% | 76.6% |
| 3398468 | 601.16.1.9 ↗ | alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › PF31076 | 0.71 | 63.0 | 5.21e-01 | 100.0% | 72.1% |
| 3582234 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.71 | 60.0 | 5.58e-01 | 94.8% | 84.0% |
| 3497029 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 62.0 | 5.70e-01 | 98.7% | 90.0% |
| 3922692 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 63.0 | 5.49e-01 | 98.7% | 87.0% |
| 4933309 | 604.17.1.0 ↗ | alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like | 0.70 | 50.0 | 5.44e-01 | 75.3% | 98.3% |
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 53.0 | 5.52e-01 | 84.4% | 92.9% |
| 3414767 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 53.0 | 5.30e-01 | 84.4% | 82.5% |
| 5003426 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.68 | 57.0 | 5.09e-01 | 96.1% | 71.3% |
| 5079439 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.67 | 55.0 | 5.11e-01 | 96.1% | 82.9% |
| 3545387 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.57 | 49.0 | 4.37e-01 | 96.1% | 99.1% |
D4
medium
residues 190-253
Domain cluster:
rep: MK448895.1__QBX25797.1__Javan274_0001__00052__D254-330
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07501.18 best | G5 | 26.2 | 1.00e-05 | 100.0% | 96.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fumA01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.82 | 73.0 | 6.92e-01 | 96.9% | 95.9% |
| 3tipA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.80 | 74.0 | 5.71e-01 | 100.0% | 56.1% |
| 4fzqA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.77 | 69.0 | 6.44e-01 | 100.0% | 89.9% |
| 2ltjA00 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.72 | 62.0 | 5.27e-01 | 100.0% | 64.9% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.72 | 41.0 | 2.71e-01 | 90.6% | 13.7% |
| 1tm0A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.70 | 38.0 | 2.81e-01 | 84.4% | 20.1% |
| 5tu7B01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.67 | 59.0 | 5.90e-01 | 96.9% | 100.0% |
| 3vskA01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.63 | 54.0 | 4.30e-01 | 98.4% | 91.0% |
| 5wbyC01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 38.0 | 2.44e-01 | 90.6% | 12.8% |
| 4orlA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 35.0 | 3.06e-01 | 92.2% | 38.2% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.55 | 46.0 | 2.98e-01 | 96.9% | 19.2% |
| 4hkqA04 | 3.10.20.370 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 34.0 | 3.32e-01 | 90.6% | 53.9% |
| 1t70A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 41.0 | 2.86e-01 | 85.9% | 99.6% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.53 | 44.0 | 3.42e-01 | 98.4% | 59.1% |
| 6a5gA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.31e-01 | 89.1% | 42.6% |
| 2kxyA01 | 2.170.120.40 | Mainly Beta › Beta Complex › RNA Polymerase Alpha Subunit; Chain A, domain 2 › YbbR-like domain | 0.53 | 43.0 | 4.03e-01 | 96.9% | 100.0% |
| 4b9gA00 | 2.60.40.3480 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 41.0 | 3.31e-01 | 93.8% | 77.4% |
| 4i4kA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.05e-01 | 93.8% | 37.7% |
| 2qxlB05 | 2.60.34.10 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 | 0.51 | 39.0 | 3.20e-01 | 84.4% | 62.2% |
| 2jtyA00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.51 | 40.0 | 3.06e-01 | 93.8% | 63.0% |
| 3eo5A01 | 2.20.230.10 | Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. | 0.51 | 44.0 | 3.96e-01 | 96.9% | 78.4% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4055918 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.88 | 82.0 | 7.72e-01 | 100.0% | 96.0% |
| 4662006 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.88 | 65.0 | 5.03e-01 | 92.2% | 38.5% |
| 3988836 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.86 | 71.0 | 7.33e-01 | 87.5% | 100.0% |
| 3989719 | 706.2.1.0 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.83 | 54.0 | 6.27e-01 | 92.2% | 95.6% |
| 860411 | 706.2.1.3 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › SasG_E | 0.83 | 62.0 | 6.82e-01 | 93.8% | 100.0% |
| 4525357 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.81 | 72.0 | 5.55e-01 | 100.0% | 51.4% |
| 4031475 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.80 | 74.0 | 4.48e-01 | 100.0% | 20.3% |
| 866038 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.77 | 69.0 | 6.44e-01 | 100.0% | 89.9% |
| 4132478 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.77 | 69.0 | 6.02e-01 | 100.0% | 77.9% |
| 3027346 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.76 | 68.0 | 5.38e-01 | 100.0% | 57.8% |
| 4618992 | 706.2.1.2 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G | 0.73 | 66.0 | 4.37e-01 | 98.4% | 30.4% |
| 1682689 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.72 | 62.0 | 5.79e-01 | 100.0% | 87.8% |
| 3989763 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.72 | 64.0 | 4.84e-01 | 98.4% | 48.0% |
| 4071921 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.71 | 65.0 | 4.85e-01 | 100.0% | 46.0% |
| 4209937 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.70 | 63.0 | 5.96e-01 | 100.0% | 94.7% |
| 2583528 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.66 | 59.0 | 5.39e-01 | 100.0% | 84.5% |
| 5054149 | 806.1.1.1 ↗ | a+b four layers › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › Aldehyde ferredoxin oxidoreductase, N-terminal domain › AFOR_N | 0.66 | 41.0 | 2.79e-01 | 87.5% | 17.1% |
| 4436435 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.63 | 53.0 | 4.27e-01 | 98.4% | 49.2% |
| 3315568 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.60 | 34.0 | 3.30e-01 | 85.9% | 48.6% |
| 3111928 | 3114.1.1.3 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › Muc_B2 | 0.54 | 46.0 | 4.07e-01 | 100.0% | 75.2% |
| 3782336 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.54 | 29.0 | 2.37e-01 | 82.8% | 23.1% |
| 139855 | 240.1.1.1 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Ribosomal protein TL5/L25 C-terminal domain-related › Ribosomal protein TL5/L25 C-terminal domain-related › YbbR | 0.54 | 44.0 | 3.95e-01 | 98.4% | 87.0% |
| 4882997 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.51 | 39.0 | 3.21e-01 | 85.9% | 66.7% |
| 185213 | 706.2.1.1 ↗ | beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G › G5 | 0.51 | 44.0 | 4.07e-01 | 96.9% | 85.2% |
| 4055808 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.50 | 34.0 | 2.77e-01 | 93.8% | 34.6% |