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MK448915.1__QBX26880.1__Javan350_0025__00025

Bact-Vir

MK448915.1__QBX26880.1__Javan350_0025__00025

Identity

Accession:
MK448915 ↗
Kingdom:
phage

Quality

76.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan350

TaxID: 2548121

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-42
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6ig5A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.73 61.0 4.15e-01 100.0% 26.1%
2wdqC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.67 53.0 3.69e-01 94.3% 26.4%
3wgbC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.56 46.0 3.55e-01 94.3% 80.7%
1ji7A00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.55 40.0 3.24e-01 82.9% 83.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4167796 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.69 54.0 3.44e-01 100.0% 16.3%
3469624 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 52.0 4.37e-01 97.1% 45.3%
3359983 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.68 52.0 3.85e-01 100.0% 30.0%
3786619 103.4.1.2 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TFIIS_M 0.57 44.0 3.40e-01 100.0% 34.7%