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MK448917.1__QBX27012.1__Javan362_0038__00020
Bact-VirMK448917.1__QBX27012.1__Javan362_0038__00020
Identity
- Accession:
- MK448917 ↗
- Kingdom:
- phage
Quality
63.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 93-151
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pptA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.74 | 46.0 | 5.48e-01 | 100.0% | 100.0% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.71 | 43.0 | 5.08e-01 | 98.3% | 100.0% |
| 2incC00 | 3.10.20.270 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › TmoB-like | 0.64 | 55.0 | 4.97e-01 | 100.0% | 96.4% |
| 6kykA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 52.0 | 4.77e-01 | 98.3% | 100.0% |
| 3ah7A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.60 | 51.0 | 4.28e-01 | 100.0% | 92.7% |
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.58 | 41.0 | 4.04e-01 | 74.6% | 76.6% |
| 1gg3A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 45.0 | 4.27e-01 | 98.3% | 98.7% |
| 2dafA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 47.0 | 4.43e-01 | 100.0% | 97.4% |
| 2ebqA00 | 4.10.1060.10 | Few Secondary Structures › Irregular › ZNF265 like › Zinc finger, RanBP2-type | 0.56 | 36.0 | 3.95e-01 | 76.3% | 83.0% |
| 3u31A02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.51 | 35.0 | 3.05e-01 | 71.2% | 58.6% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028456 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 55.0 | 6.13e-01 | 98.3% | 95.6% |
| 5047273 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 50.0 | 5.79e-01 | 96.6% | 95.0% |
| 5029687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 53.0 | 5.80e-01 | 96.6% | 97.8% |
| 4980259 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 53.0 | 5.92e-01 | 79.7% | 100.0% |
| 4995783 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 47.0 | 5.41e-01 | 98.3% | 97.5% |
| 5060995 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 47.0 | 5.49e-01 | 72.9% | 100.0% |
| 3303263 | 376.1.6.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › zf-LSD1 | 0.72 | 47.0 | 5.42e-01 | 91.5% | 100.0% |
| 5028514 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.71 | 55.0 | 5.55e-01 | 100.0% | 83.3% |
| 4973787 | 375.1.1.11 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27 | 0.71 | 48.0 | 4.66e-01 | 74.6% | 63.1% |
| 4969798 | 375.1.3.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF5817 | 0.71 | 49.0 | 5.13e-01 | 86.4% | 78.2% |
| 4956278 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 53.0 | 5.65e-01 | 96.6% | 94.0% |
| 5075187 | 375.1.3.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 | 0.71 | 48.0 | 4.85e-01 | 88.1% | 70.0% |
| 3892736 | 103.1.1.67 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 | 0.71 | 50.0 | 5.49e-01 | 84.7% | 100.0% |
| 4945327 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.71 | 49.0 | 4.64e-01 | 89.8% | 61.4% |
| 4002266 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.70 | 48.0 | 4.82e-01 | 96.6% | 70.0% |
| 3361170 | 375.1.1.201 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_20 | 0.69 | 46.0 | 4.85e-01 | 84.7% | 80.0% |
| 5004151 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 52.0 | 5.55e-01 | 100.0% | 98.0% |
| 4963432 | 4076.2.1.7 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › DUF5817 | 0.68 | 50.0 | 4.43e-01 | 88.1% | 54.1% |
| 3368649 | 375.1.1.201 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_20 | 0.68 | 44.0 | 4.91e-01 | 93.2% | 97.5% |
| 3179128 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.67 | 43.0 | 4.90e-01 | 89.8% | 97.5% |
| 5047885 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 41.0 | 4.54e-01 | 100.0% | 82.2% |
| 3681017 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 43.0 | 4.72e-01 | 81.4% | 100.0% |
| 3226989 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.65 | 47.0 | 4.86e-01 | 88.1% | 85.5% |
| 4979347 | 375.1.3.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 | 0.64 | 52.0 | 4.97e-01 | 89.8% | 100.0% |
| 4111189 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 49.0 | 4.87e-01 | 84.7% | 81.7% |
| 3638416 | 376.1.4.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog | 0.64 | 46.0 | 4.71e-01 | 88.1% | 83.6% |
| 1680338 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.63 | 43.0 | 4.05e-01 | 98.3% | 57.5% |
| 3703544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 41.0 | 4.63e-01 | 86.4% | 100.0% |
| 4512216 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 43.0 | 4.54e-01 | 100.0% | 88.0% |
| 3801584 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.59 | 50.0 | 4.33e-01 | 100.0% | 86.0% |
| 3846254 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.59 | 46.0 | 4.12e-01 | 89.8% | 84.4% |
| 3748079 | 376.1.6.10 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR, PF26200 | 0.58 | 46.0 | 3.48e-01 | 89.8% | 49.0% |
| 3256947 | 3628.1.1.0 ↗ | a+b complex topology › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit › Transcription factor tau 60 kDa subunit | 0.55 | 47.0 | 3.68e-01 | 98.3% | 54.1% |
| 4982858 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 36.0 | 2.91e-01 | 86.4% | 31.9% |
| 3707098 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 41.0 | 3.83e-01 | 93.2% | 66.7% |
| 3292956 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.52 | 34.0 | 3.64e-01 | 74.6% | 82.0% |
| 4029250 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 38.0 | 3.49e-01 | 86.4% | 94.3% |