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MK448920.1__QBX27159.1__Javan372_0023__00023
Bact-VirMK448920.1__QBX27159.1__Javan372_0023__00023
Identity
- Accession:
- MK448920 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 39-92
Domain cluster:
rep: NC_071083.1__YP_010683437.1__PQF09_gp43__00043__D112-175
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3q7yA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.76 | 67.0 | 5.12e-01 | 100.0% | 99.2% |
| 1upsA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.75 | 67.0 | 5.00e-01 | 100.0% | 97.0% |
| 3zx7A02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.75 | 67.0 | 4.95e-01 | 100.0% | 94.9% |
| 5g56A03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.75 | 64.0 | 4.90e-01 | 96.3% | 99.2% |
| 3a07B00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.72 | 60.0 | 4.74e-01 | 96.3% | 95.8% |
| 6lciA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.71 | 59.0 | 4.42e-01 | 96.3% | 100.0% |
| 1hcdA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.63 | 53.0 | 4.24e-01 | 100.0% | 98.3% |
| 3nwnA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.59 | 48.0 | 3.09e-01 | 100.0% | 26.9% |
| 1b9mB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.55 | 33.0 | 3.06e-01 | 85.2% | 43.1% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 4.16e-01 | 100.0% | 91.7% |
| 2eayB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 4.09e-01 | 100.0% | 89.8% |
| 4fsdA02 | 3.40.5.100 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.52 | 43.0 | 3.79e-01 | 100.0% | 61.6% |
| 3ca8A01 | 1.10.3620.10 | Mainly Alpha › Orthogonal Bundle › YdcF fold › YdcF like domain | 0.52 | 35.0 | 2.97e-01 | 74.1% | 89.6% |
| 3k59A07 | 1.10.132.60 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain | 0.52 | 39.0 | 2.96e-01 | 85.2% | 59.9% |
| 5i47B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 37.0 | 3.26e-01 | 87.0% | 87.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3249251 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.76 | 67.0 | 4.99e-01 | 100.0% | 86.2% |
| 3908634 | 6.1.1.29 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CysR_MRC2_N | 0.72 | 62.0 | 4.77e-01 | 98.1% | 89.6% |
| 3701157 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.57 | 48.0 | 2.98e-01 | 100.0% | 22.5% |
| 3394453 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.55 | 45.0 | 2.74e-01 | 100.0% | 17.2% |
| 2797621 | 206.1.3.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH-S_ATP | 0.53 | 41.0 | 2.90e-01 | 100.0% | 25.4% |
| 3834467 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.52 | 43.0 | 2.57e-01 | 100.0% | 15.8% |
| 5003888 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.52 | 36.0 | 3.05e-01 | 100.0% | 43.3% |
| 5071733 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.51 | 41.0 | 3.56e-01 | 94.4% | 68.9% |
| 5025566 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.50 | 42.0 | 4.25e-01 | 100.0% | 100.0% |