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MK448930.1__QBX27697.1__Javan406_0047__00047
Bact-VirMK448930.1__QBX27697.1__Javan406_0047__00047
Identity
- Accession:
- MK448930 ↗
- Kingdom:
- phage
Quality
49.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 328-450
D2
high
residues 502-542_595-719
D3
medium
residues 543-594
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03009.24 best | GDPD | 40.1 | 6.50e-10 | 98.1% | 17.2% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ks6A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.92 | 77.0 | 4.75e-01 | 100.0% | 18.4% |
| 1o1zA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.91 | 69.0 | 4.33e-01 | 100.0% | 18.1% |
| 2pz0B00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.89 | 81.0 | 5.06e-01 | 100.0% | 21.0% |
| 3qvqA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.88 | 79.0 | 4.95e-01 | 100.0% | 20.3% |
| 2oogD00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.88 | 81.0 | 4.97e-01 | 100.0% | 22.0% |
| 7ympE01 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.88 | 81.0 | 4.93e-01 | 100.0% | 28.7% |
| 2otdA01 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.87 | 78.0 | 4.98e-01 | 100.0% | 22.4% |
| 1zccA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.87 | 78.0 | 4.92e-01 | 100.0% | 21.3% |
| 3i10A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.86 | 77.0 | 4.70e-01 | 100.0% | 18.0% |
| 3mz2A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.85 | 76.0 | 4.63e-01 | 100.0% | 17.5% |
| 3l12B00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.85 | 78.0 | 4.73e-01 | 100.0% | 24.4% |
| 1ydyA00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.84 | 77.0 | 4.60e-01 | 100.0% | 23.8% |
| 2o55A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.79 | 66.0 | 4.11e-01 | 100.0% | 18.5% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051726 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.97 | 79.0 | 4.84e-01 | 100.0% | 18.1% |
| 5025575 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.96 | 78.0 | 4.84e-01 | 100.0% | 19.1% |
| 3634988 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.95 | 80.0 | 4.75e-01 | 100.0% | 14.8% |
| None | — | 0.95 | 76.0 | 4.82e-01 | 100.0% | 20.0% | |
| 3214410 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.95 | 78.0 | 4.71e-01 | 100.0% | 16.1% |
| 4960417 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.94 | 75.0 | 4.72e-01 | 100.0% | 19.1% |
| 4978539 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.93 | 75.0 | 4.67e-01 | 100.0% | 19.1% |
| 5028823 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.93 | 74.0 | 4.70e-01 | 100.0% | 20.0% |
| 2831694 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.92 | 74.0 | 4.57e-01 | 100.0% | 17.4% |
| 378990 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.92 | 77.0 | 4.75e-01 | 100.0% | 18.4% |
| 5049645 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.92 | 75.0 | 4.67e-01 | 100.0% | 18.4% |
| 5041363 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.92 | 75.0 | 4.69e-01 | 100.0% | 19.1% |
| 4128925 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.92 | 84.0 | 5.23e-01 | 100.0% | 20.9% |
| 3518925 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.91 | 85.0 | 5.14e-01 | 100.0% | 18.6% |
| 4996562 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.91 | 83.0 | 5.16e-01 | 100.0% | 20.4% |
| 3526555 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.91 | 83.0 | 5.06e-01 | 100.0% | 18.6% |
| 3969585 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.91 | 82.0 | 5.18e-01 | 100.0% | 21.7% |
| 5045042 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.90 | 84.0 | 5.13e-01 | 100.0% | 21.5% |
| 3185090 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.90 | 82.0 | 5.07e-01 | 100.0% | 20.4% |
| 3587873 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.90 | 75.0 | 4.66e-01 | 100.0% | 18.4% |
| 4961660 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.90 | 72.0 | 4.62e-01 | 100.0% | 20.5% |
| None | — | 0.90 | 82.0 | 5.09e-01 | 100.0% | 21.0% | |
| 3172648 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.90 | 74.0 | 4.42e-01 | 100.0% | 14.4% |
| 3590456 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.89 | 81.0 | 5.08e-01 | 100.0% | 21.3% |
| 339021 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.89 | 81.0 | 5.06e-01 | 100.0% | 21.0% |
| 4032813 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.89 | 81.0 | 5.07e-01 | 100.0% | 21.3% |
| 3626919 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.89 | 83.0 | 4.96e-01 | 100.0% | 18.7% |
| 5083480 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.89 | 81.0 | 5.00e-01 | 100.0% | 20.2% |
| 3741781 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.88 | 75.0 | 4.62e-01 | 100.0% | 18.1% |
| 1349051 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.88 | 82.0 | 4.99e-01 | 100.0% | 21.1% |
| 142980 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.88 | 79.0 | 4.95e-01 | 100.0% | 20.3% |
| 3263137 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.88 | 81.0 | 4.93e-01 | 100.0% | 20.3% |
| 3015492 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.88 | 81.0 | 4.88e-01 | 100.0% | 26.1% |
| 5036821 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.88 | 79.0 | 4.97e-01 | 100.0% | 21.3% |
| 163625 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.87 | 78.0 | 4.91e-01 | 100.0% | 20.8% |
| 4031027 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.87 | 75.0 | 4.72e-01 | 100.0% | 20.4% |
| 3962522 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.87 | 81.0 | 4.94e-01 | 100.0% | 20.4% |
| 4944840 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.87 | 80.0 | 5.01e-01 | 100.0% | 22.1% |
| 8791 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.87 | 78.0 | 4.92e-01 | 100.0% | 21.3% |
| 5041537 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.87 | 81.0 | 4.99e-01 | 100.0% | 25.4% |
| None | — | 0.86 | 81.0 | 4.82e-01 | 100.0% | 18.7% | |
| 3596244 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.86 | 77.0 | 4.71e-01 | 100.0% | 17.5% |
| 135722 | 2002.1.1.107 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD,DUF4996 | 0.86 | 77.0 | 4.70e-01 | 100.0% | 18.0% |
| None | — | 0.86 | 78.0 | 4.88e-01 | 100.0% | 21.0% | |
| None | — | 0.86 | 68.0 | 4.25e-01 | 100.0% | 17.6% | |
| 3926373 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.86 | 79.0 | 4.79e-01 | 100.0% | 18.6% |
| 5064209 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.85 | 79.0 | 4.91e-01 | 100.0% | 20.6% |
| 3849305 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.85 | 80.0 | 4.76e-01 | 100.0% | 18.2% |
| 139765 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.85 | 76.0 | 4.63e-01 | 100.0% | 17.5% |
| 3755452 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.85 | 80.0 | 4.74e-01 | 100.0% | 18.1% |
| 3596227 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.83 | 75.0 | 4.59e-01 | 100.0% | 18.2% |
| 3428621 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.82 | 74.0 | 4.36e-01 | 100.0% | 20.5% |
| 3223347 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.82 | 66.0 | 4.01e-01 | 100.0% | 15.5% |
| 3718053 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.81 | 71.0 | 4.32e-01 | 100.0% | 16.5% |
| 4029798 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.79 | 70.0 | 4.19e-01 | 100.0% | 29.7% |
| 5014012 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.79 | 62.0 | 3.92e-01 | 100.0% | 19.1% |
| 3264775 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.75 | 69.0 | 4.10e-01 | 100.0% | 16.7% |
| 3414198 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.70 | 64.0 | 3.85e-01 | 100.0% | 18.6% |