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MK448934.1__QBX27883.1__Javan422_0010__00010

Bact-Vir

MK448934.1__QBX27883.1__Javan422_0010__00010

Identity

Accession:
MK448934 ↗
Kingdom:
phage

Quality

96.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-82
PDB
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 61.0 6.83e-01 74.4% 90.8%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 59.0 5.35e-01 70.7% 54.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 58.0 6.59e-01 72.0% 93.8%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 57.0 6.50e-01 74.4% 98.4%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 54.0 6.19e-01 72.0% 96.7%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.77 58.0 4.76e-01 80.5% 45.8%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.36e-01 85.4% 90.0%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 50.0 4.80e-01 70.7% 64.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 5.25e-01 80.5% 75.0%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.73 53.0 4.33e-01 75.6% 46.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.93e-01 72.0% 67.8%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 59.0 4.33e-01 91.5% 82.0%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 5.01e-01 96.3% 78.6%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.68 52.0 4.45e-01 81.7% 68.7%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 4.84e-01 97.6% 73.1%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 58.0 4.83e-01 93.9% 75.4%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.39e-01 84.1% 80.6%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.31e-01 90.2% 72.7%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.42e-01 96.3% 80.1%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 3.94e-01 81.7% 77.5%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.14e-01 86.6% 73.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 52.0 4.33e-01 97.6% 74.8%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.04e-01 85.4% 80.9%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.12e-01 93.9% 71.9%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 39.0 3.77e-01 86.6% 58.5%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.45e-01 97.6% 76.9%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 47.0 3.98e-01 90.2% 83.1%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.83e-01 85.4% 77.5%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.63e-01 89.0% 78.8%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 37.0 3.74e-01 73.2% 86.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 3.23e-01 72.0% 90.4%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587538 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 67.0 7.30e-01 76.8% 91.2%
4121566 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 63.0 6.06e-01 70.7% 64.4%
3291186 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 64.0 5.79e-01 73.2% 59.0%
4243530 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 61.0 6.80e-01 72.0% 89.2%
4454772 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 67.0 7.40e-01 79.3% 100.0%
4530655 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 64.0 5.94e-01 76.8% 62.0%
4876274 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 64.0 7.26e-01 75.6% 100.0%
4520564 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 59.0 6.03e-01 70.7% 71.2%
4683324 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.87 59.0 5.25e-01 70.7% 51.8%
4683276 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 72.0 6.80e-01 87.8% 77.9%
4175748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.86 63.0 6.47e-01 76.8% 78.8%
4202221 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 65.0 7.11e-01 82.9% 97.1%
4237551 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 63.0 5.94e-01 76.8% 66.3%
4165188 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 62.0 6.15e-01 76.8% 72.9%
4497189 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.84 63.0 7.00e-01 78.0% 98.5%
None 0.84 60.0 5.31e-01 74.4% 54.5%
None 0.84 59.0 5.40e-01 74.4% 57.1%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.84 61.0 6.77e-01 76.8% 98.5%
4140444 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.84 59.0 5.29e-01 74.4% 54.5%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 61.0 6.37e-01 76.8% 82.7%
4470607 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.83 59.0 5.17e-01 74.4% 52.2%
3279596 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.83 65.0 4.86e-01 82.9% 36.3%
3163613 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 60.0 6.45e-01 75.6% 92.9%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 60.0 5.70e-01 75.6% 66.0%
4059731 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.82 57.0 5.18e-01 72.0% 88.6%
3955987 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 60.0 5.71e-01 76.8% 66.3%
3964397 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 59.0 5.41e-01 75.6% 59.0%
5012037 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 57.0 5.51e-01 72.0% 66.7%
None 0.81 58.0 5.47e-01 74.4% 63.2%
4037682 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.81 57.0 5.34e-01 74.4% 60.0%
3959929 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 59.0 6.06e-01 76.8% 78.8%
4336182 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 61.0 5.91e-01 79.3% 76.7%
4205790 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 58.0 5.90e-01 75.6% 76.2%
3589532 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 62.0 5.78e-01 80.5% 78.6%
3283863 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 64.0 6.20e-01 85.4% 77.8%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 59.0 5.71e-01 76.8% 70.0%
4486973 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 62.0 6.17e-01 81.7% 78.8%
4304581 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.80 57.0 5.40e-01 74.4% 63.8%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 61.0 5.70e-01 80.5% 66.0%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 58.0 6.09e-01 75.6% 85.3%
4146353 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.80 66.0 6.73e-01 90.2% 91.3%
3959868 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 58.0 6.10e-01 76.8% 84.0%
3587471 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 64.0 5.47e-01 84.1% 66.7%
3286778 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 59.0 6.35e-01 78.0% 92.9%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 57.0 6.30e-01 75.6% 93.8%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 61.0 6.22e-01 80.5% 85.0%
3961841 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 63.0 6.74e-01 90.2% 100.0%
4396640 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 62.0 5.38e-01 82.9% 59.2%
4439853 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 57.0 6.12e-01 76.8% 88.6%
3289947 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 58.0 5.96e-01 78.0% 82.5%
2817645 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.78 57.0 5.83e-01 75.6% 80.0%
3284292 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 57.0 5.57e-01 76.8% 72.2%
4160122 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.78 70.0 5.71e-01 100.0% 58.7%
4279016 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.77 62.0 6.27e-01 84.1% 92.5%
None 0.77 69.0 4.87e-01 98.8% 35.5%
3291331 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.77 61.0 6.19e-01 86.6% 87.5%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 59.0 6.18e-01 80.5% 92.0%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 57.0 6.30e-01 81.7% 97.0%
3288090 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.76 58.0 6.26e-01 81.7% 92.9%
4372550 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 60.0 5.83e-01 82.9% 75.6%
4238054 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.76 70.0 4.89e-01 100.0% 35.5%
3969325 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 55.0 5.96e-01 75.6% 91.4%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 55.0 5.91e-01 75.6% 91.4%
3973709 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 55.0 5.02e-01 75.6% 61.0%
4456068 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 58.0 5.40e-01 80.5% 68.0%
3284011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 58.0 6.21e-01 80.5% 94.3%
4663875 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.75 67.0 4.77e-01 100.0% 37.1%
4043241 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 60.0 6.08e-01 86.6% 87.5%
3951829 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.75 61.0 6.02e-01 85.4% 82.4%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 57.0 5.81e-01 81.7% 83.7%
4032673 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 67.0 4.74e-01 100.0% 36.7%
3283374 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 57.0 5.40e-01 80.5% 69.5%
3972713 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 58.0 5.55e-01 84.1% 75.8%
3573627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 56.0 4.80e-01 80.5% 52.0%
4577850 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.74 62.0 5.77e-01 89.0% 76.8%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.73 66.0 5.07e-01 100.0% 46.5%
3587755 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.73 67.0 5.71e-01 100.0% 74.6%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 57.0 5.71e-01 87.8% 84.7%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 59.0 6.12e-01 91.5% 98.7%
3961604 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 58.0 5.47e-01 91.5% 74.0%
3974736 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 60.0 5.98e-01 89.0% 85.9%
3284984 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.70 62.0 4.40e-01 100.0% 34.6%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 58.0 6.00e-01 92.7% 97.3%
3288971 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.69 61.0 5.05e-01 100.0% 58.7%
4603338 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.69 54.0 5.83e-01 84.1% 98.6%
4388780 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.68 62.0 5.02e-01 97.6% 99.3%
4233279 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.67 58.0 4.27e-01 100.0% 38.7%
3284461 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 58.0 4.19e-01 100.0% 35.6%