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MK448939.1__QBX28128.1__Javan440_0036__00036

Bact-Vir

MK448939.1__QBX28128.1__Javan440_0036__00036

Identity

Accession:
MK448939 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-47
PDB
Domain cluster: representative
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 73.0 6.42e-01 95.0% 63.8%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 74.0 6.88e-01 100.0% 76.5%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 73.0 5.79e-01 100.0% 47.5%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 75.0 6.60e-01 100.0% 67.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 71.0 6.43e-01 100.0% 67.9%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 73.0 6.19e-01 100.0% 58.2%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 72.0 5.93e-01 100.0% 52.8%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.42e-01 100.0% 63.5%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 69.0 6.28e-01 97.5% 68.5%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 6.20e-01 100.0% 60.0%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 72.0 6.42e-01 100.0% 67.8%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 70.0 6.38e-01 100.0% 70.9%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 6.23e-01 100.0% 60.9%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 5.82e-01 100.0% 50.0%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 71.0 7.08e-01 97.5% 95.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 6.52e-01 100.0% 74.1%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 5.87e-01 100.0% 60.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 5.29e-01 100.0% 43.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 6.41e-01 95.0% 78.0%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 63.0 4.89e-01 82.5% 41.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.06e-01 100.0% 63.9%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.22e-01 100.0% 38.1%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 6.27e-01 100.0% 78.8%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.80 65.0 6.52e-01 95.0% 100.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 67.0 6.50e-01 100.0% 86.7%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.80 70.0 5.31e-01 100.0% 88.3%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.80 65.0 4.52e-01 100.0% 27.5%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.80 66.0 5.01e-01 100.0% 86.4%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 6.24e-01 100.0% 72.7%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 5.98e-01 100.0% 63.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.54e-01 100.0% 55.2%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.74e-01 100.0% 59.1%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.13e-01 100.0% 75.9%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 65.0 6.38e-01 100.0% 88.6%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 4.79e-01 100.0% 35.6%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.86e-01 100.0% 65.0%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.37e-01 100.0% 51.4%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 68.0 5.81e-01 100.0% 62.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.78 62.0 3.85e-01 100.0% 15.2%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.64e-01 100.0% 61.9%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 66.0 5.22e-01 100.0% 47.1%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.21e-01 100.0% 51.3%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.77 62.0 4.77e-01 100.0% 38.6%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 67.0 5.89e-01 100.0% 66.7%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 64.0 5.71e-01 100.0% 70.5%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 5.57e-01 100.0% 62.0%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.96e-01 100.0% 78.8%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 67.0 5.44e-01 100.0% 53.3%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 64.0 5.13e-01 97.5% 48.7%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 6.49e-01 100.0% 100.0%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 4.63e-01 100.0% 34.1%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 5.81e-01 100.0% 65.6%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 6.09e-01 100.0% 82.0%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.35e-01 100.0% 60.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.40e-01 100.0% 61.1%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.74 60.0 4.09e-01 95.0% 54.2%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 4.82e-01 87.5% 55.2%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.54e-01 100.0% 63.5%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 4.41e-01 100.0% 30.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 4.27e-01 100.0% 28.4%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 4.26e-01 100.0% 33.3%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.17e-01 100.0% 57.1%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 4.22e-01 100.0% 30.5%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.72 62.0 4.38e-01 100.0% 30.5%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 61.0 5.60e-01 100.0% 80.0%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.07e-01 100.0% 56.5%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 54.0 5.48e-01 82.5% 85.0%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.89e-01 100.0% 56.9%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 57.0 5.53e-01 95.0% 85.1%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 61.0 4.63e-01 100.0% 42.3%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.46e-01 100.0% 40.0%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.69 58.0 3.76e-01 100.0% 22.7%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 58.0 4.60e-01 100.0% 46.0%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 54.0 5.24e-01 92.5% 85.1%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 54.0 5.24e-01 90.0% 91.3%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 57.0 4.94e-01 97.5% 66.2%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 59.0 5.02e-01 97.5% 67.2%
5k7fA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 52.0 5.24e-01 90.0% 95.1%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 55.0 5.00e-01 100.0% 75.9%
3s5rB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 51.0 3.41e-01 100.0% 28.6%
2fd5A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 49.0 4.72e-01 90.0% 87.5%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4214638 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 87.0 7.67e-01 100.0% 72.7%
5074438 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.93 83.0 8.35e-01 97.5% 97.5%
4978144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.88 77.0 6.74e-01 100.0% 68.3%
5053647 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 76.0 6.87e-01 100.0% 74.5%
5070618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 76.0 7.13e-01 100.0% 80.0%
4928849 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 76.0 6.64e-01 100.0% 68.3%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 76.0 6.67e-01 100.0% 66.7%
4978612 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.86 76.0 6.62e-01 100.0% 66.7%
4040211 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.86 75.0 6.58e-01 100.0% 68.3%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.86 72.0 5.70e-01 97.5% 47.5%
4449179 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 74.0 6.54e-01 100.0% 68.3%
4318089 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.85 74.0 6.49e-01 100.0% 68.3%
5053252 101.1.2.304 alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.85 73.0 5.33e-01 100.0% 37.3%
4967134 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.85 68.0 7.14e-01 87.5% 100.0%
5082754 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 71.0 6.17e-01 100.0% 61.7%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 73.0 5.90e-01 100.0% 52.0%
1769338 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 72.0 6.06e-01 100.0% 57.1%
5019015 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.84 71.0 7.14e-01 95.0% 97.5%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 72.0 6.18e-01 100.0% 61.5%
3787646 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 70.0 7.04e-01 95.0% 95.0%
5048567 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 71.0 6.13e-01 100.0% 61.5%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.83 72.0 5.79e-01 97.5% 52.0%
4984666 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 71.0 5.82e-01 100.0% 54.7%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 70.0 5.48e-01 100.0% 45.9%
3952144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 70.0 6.04e-01 100.0% 63.1%
3741366 101.1.1.96 alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.82 71.0 6.03e-01 97.5% 60.0%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 71.0 5.79e-01 100.0% 53.3%
3502245 101.1.6.13 alpha arrays › HTH › HTH › TrpR › HTH_28 0.82 67.0 6.49e-01 95.0% 82.2%
4984317 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 71.0 6.44e-01 100.0% 72.7%
3959624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 6.34e-01 95.0% 78.0%
4977346 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 69.0 6.52e-01 100.0% 82.0%
5051778 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 64.0 6.76e-01 90.0% 100.0%
3291331 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.82 70.0 5.58e-01 100.0% 48.8%
5030781 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 65.0 6.57e-01 100.0% 92.5%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.82 71.0 5.58e-01 97.5% 48.8%
4047135 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 69.0 6.42e-01 95.0% 78.0%
5078072 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 71.0 6.06e-01 100.0% 63.1%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.81 69.0 6.10e-01 100.0% 66.7%
4975730 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 5.91e-01 100.0% 58.6%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 70.0 5.86e-01 100.0% 57.1%
3987778 101.1.1.118 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 0.81 70.0 6.33e-01 100.0% 74.5%
4043241 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 71.0 5.59e-01 100.0% 48.8%
3593689 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 6.17e-01 100.0% 68.3%
5013438 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.81 70.0 6.16e-01 100.0% 66.7%
4978382 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.81 68.0 6.21e-01 100.0% 74.5%
5030858 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 6.20e-01 100.0% 74.5%
5066726 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 70.0 6.14e-01 100.0% 66.7%
5074942 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.80 68.0 5.49e-01 95.0% 50.7%
5040079 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 68.0 5.65e-01 100.0% 54.7%
3953011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 68.0 6.23e-01 100.0% 72.7%
4985252 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 67.0 5.86e-01 100.0% 63.1%
4943479 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 67.0 6.34e-01 100.0% 80.0%
4010472 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 69.0 6.43e-01 100.0% 80.0%
3967091 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.80 65.0 5.90e-01 100.0% 66.7%
3736326 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 5.91e-01 100.0% 61.5%
5037302 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.79 66.0 5.92e-01 100.0% 66.7%
3180778 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 68.0 5.84e-01 100.0% 61.5%
3933478 101.1.1.197 alpha arrays › HTH › HTH › Three-helical HTH › IF2_N 0.79 68.0 5.78e-01 97.5% 61.5%
4938759 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.79 67.0 6.15e-01 100.0% 72.7%
4224164 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.79 71.0 5.59e-01 100.0% 51.2%
4192837 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 67.0 6.11e-01 100.0% 72.7%
4998812 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 67.0 5.80e-01 100.0% 63.1%
3946890 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.78 68.0 5.69e-01 100.0% 57.1%
5019932 3151.1.1.0 alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 0.78 59.0 6.14e-01 90.0% 100.0%
3567273 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.78 65.0 6.35e-01 100.0% 88.9%
5060508 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 68.0 6.90e-01 100.0% 100.0%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 66.0 5.69e-01 100.0% 61.5%
5038325 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 69.0 6.43e-01 100.0% 81.6%
5082771 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 68.0 5.41e-01 100.0% 51.2%
5077990 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.77 66.0 5.16e-01 100.0% 45.6%
4966252 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 60.0 6.21e-01 90.0% 100.0%
5030083 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 63.0 5.88e-01 100.0% 74.0%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 69.0 5.98e-01 100.0% 66.7%
5044655 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 69.0 6.38e-01 100.0% 80.0%
3984815 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.77 63.0 5.86e-01 100.0% 72.7%
4173594 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.76 64.0 6.19e-01 97.5% 86.7%
5030496 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 65.0 5.78e-01 100.0% 66.7%
3239905 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.76 63.0 5.07e-01 100.0% 47.1%
4547756 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.76 65.0 5.47e-01 100.0% 58.6%
4007629 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.76 65.0 5.42e-01 100.0% 55.7%
5018201 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.76 65.0 5.69e-01 100.0% 65.0%
3781995 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 64.0 5.64e-01 97.5% 65.0%
3968335 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.76 67.0 5.83e-01 100.0% 66.7%
4928175 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.76 64.0 6.39e-01 100.0% 92.9%
3784774 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.76 63.0 5.61e-01 97.5% 66.7%
3924290 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 67.0 6.47e-01 100.0% 88.9%
3273891 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.75 61.0 4.48e-01 100.0% 71.7%
3469752 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.75 61.0 5.97e-01 100.0% 91.1%
4333531 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 65.0 6.05e-01 100.0% 86.0%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.74 62.0 5.30e-01 100.0% 57.1%
3964709 101.1.1.118 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS630 0.74 57.0 5.43e-01 100.0% 74.0%
3387962 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 62.0 5.71e-01 100.0% 74.1%
5021925 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 4.53e-01 100.0% 37.3%
4931278 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.76e-01 100.0% 84.9%
3588243 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.72 62.0 5.38e-01 95.0% 66.7%
3374351 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.68 54.0 5.22e-01 100.0% 80.0%
D2 medium residues 60-97
PDB
Domain cluster: representative
CATH (79)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 73.0 7.20e-01 100.0% 95.1%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 73.0 6.50e-01 100.0% 69.1%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.47e-01 100.0% 46.3%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 5.99e-01 100.0% 61.9%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 5.61e-01 100.0% 51.4%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 6.32e-01 100.0% 70.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.78e-01 100.0% 56.7%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 67.0 6.04e-01 100.0% 68.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 67.0 5.97e-01 100.0% 66.1%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 6.00e-01 100.0% 65.5%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 5.45e-01 100.0% 48.8%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.74e-01 94.7% 62.1%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.96e-01 94.7% 76.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.31e-01 100.0% 49.3%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 5.56e-01 100.0% 57.6%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.68e-01 100.0% 58.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 64.0 5.80e-01 100.0% 67.9%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.74e-01 100.0% 62.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 63.0 4.00e-01 100.0% 18.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 64.0 6.16e-01 100.0% 84.4%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 64.0 5.65e-01 100.0% 65.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.23e-01 100.0% 52.9%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.47e-01 100.0% 59.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 61.0 5.35e-01 100.0% 58.7%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.90e-01 100.0% 77.6%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.92e-01 100.0% 43.2%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.75 61.0 5.51e-01 97.4% 89.3%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.75 62.0 4.17e-01 97.4% 54.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 63.0 4.79e-01 100.0% 88.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 4.73e-01 100.0% 42.5%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 58.0 4.56e-01 100.0% 41.5%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.73 62.0 4.32e-01 100.0% 29.8%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.48e-01 100.0% 76.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 4.97e-01 100.0% 53.7%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 60.0 5.06e-01 100.0% 80.3%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 6.05e-01 100.0% 97.4%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 61.0 5.08e-01 100.0% 54.3%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.72 59.0 4.11e-01 100.0% 26.4%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.80e-01 100.0% 50.0%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.55e-01 100.0% 78.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.24e-01 100.0% 63.3%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 4.65e-01 100.0% 47.1%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.16e-01 100.0% 66.7%
2wteA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 4.95e-01 100.0% 54.2%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 5.65e-01 100.0% 86.4%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 56.0 4.32e-01 100.0% 85.4%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.05e-01 100.0% 29.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.11e-01 100.0% 33.3%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.97e-01 100.0% 60.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 3.91e-01 100.0% 27.7%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 56.0 4.78e-01 92.1% 61.9%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 50.0 4.15e-01 81.6% 47.2%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 4.75e-01 100.0% 56.0%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 4.70e-01 100.0% 61.3%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.33e-01 100.0% 40.9%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.71e-01 100.0% 58.9%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 3.85e-01 100.0% 28.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.53e-01 100.0% 63.7%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.67 52.0 5.14e-01 94.7% 97.6%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.67 56.0 3.58e-01 100.0% 19.5%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 3.81e-01 100.0% 27.5%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.67 51.0 4.81e-01 100.0% 78.6%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 54.0 4.34e-01 100.0% 45.7%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 53.0 3.56e-01 100.0% 31.8%
2j5oA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.53e-01 100.0% 55.4%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.30e-01 100.0% 47.6%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 54.0 4.27e-01 100.0% 46.0%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 51.0 4.49e-01 92.1% 61.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 53.0 4.57e-01 100.0% 61.5%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.64 52.0 3.62e-01 100.0% 38.2%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 52.0 4.94e-01 94.7% 91.3%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.63 50.0 3.53e-01 100.0% 38.2%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 4.42e-01 100.0% 55.1%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 53.0 4.56e-01 100.0% 78.1%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 3.67e-01 100.0% 57.6%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.17e-01 86.8% 55.2%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 3.82e-01 100.0% 40.4%
7u32G01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.61 47.0 4.32e-01 94.7% 66.1%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.61 45.0 4.41e-01 94.7% 82.6%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3807056 101.1.2.361 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-binding 0.90 81.0 5.54e-01 100.0% 32.5%
3191582 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.89 79.0 5.37e-01 100.0% 30.0%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.89 77.0 7.66e-01 97.4% 92.5%
3701286 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.89 80.0 7.23e-01 100.0% 76.0%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 79.0 7.19e-01 100.0% 76.0%
4061265 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.88 79.0 5.09e-01 100.0% 23.7%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 78.0 6.51e-01 100.0% 58.5%
3640035 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 77.0 5.90e-01 100.0% 44.7%
3590401 375.1.1.90 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ISL3 0.86 74.0 4.96e-01 100.0% 26.2%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.86 74.0 6.43e-01 100.0% 63.3%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 74.0 7.09e-01 100.0% 84.4%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 74.0 7.08e-01 100.0% 84.4%
1822676 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.86 73.0 6.54e-01 100.0% 70.9%
5013090 304.4.1.83 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › HTH_24 0.85 75.0 4.74e-01 100.0% 22.2%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 6.05e-01 100.0% 54.3%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 73.0 6.36e-01 100.0% 65.0%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 73.0 6.49e-01 100.0% 69.1%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 73.0 5.87e-01 100.0% 50.7%
3597464 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 73.0 6.33e-01 100.0% 66.7%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 6.24e-01 100.0% 63.3%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 73.0 5.96e-01 100.0% 53.5%
3198859 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.84 73.0 6.31e-01 100.0% 73.3%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 71.0 6.17e-01 100.0% 63.3%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 6.56e-01 100.0% 76.0%
5050152 101.1.3.35 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Terminase_5 0.83 71.0 6.57e-01 100.0% 76.0%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.83 71.0 6.57e-01 100.0% 76.0%
3632861 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 6.78e-01 100.0% 97.8%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 70.0 6.11e-01 100.0% 63.3%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 69.0 5.57e-01 100.0% 49.3%
3199092 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.82 69.0 6.45e-01 100.0% 78.0%
3892684 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.82 68.0 6.38e-01 100.0% 78.0%
5027602 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.14e-01 97.4% 70.9%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.81 66.0 6.67e-01 97.4% 97.4%
3946608 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 70.0 5.76e-01 100.0% 54.3%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 68.0 5.94e-01 100.0% 63.3%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 6.78e-01 100.0% 95.0%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 67.0 5.71e-01 100.0% 56.9%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 68.0 5.95e-01 100.0% 63.3%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.80 66.0 5.65e-01 100.0% 56.9%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.80 67.0 4.30e-01 100.0% 20.6%
4999211 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 6.58e-01 100.0% 84.4%
3890615 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.80 69.0 6.39e-01 100.0% 76.0%
3963874 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 66.0 4.71e-01 100.0% 31.7%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.80 65.0 5.78e-01 100.0% 63.3%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 65.0 5.94e-01 100.0% 69.1%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 65.0 5.33e-01 100.0% 49.3%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 66.0 5.40e-01 100.0% 50.7%
3583872 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 66.0 5.96e-01 100.0% 69.1%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 67.0 6.24e-01 100.0% 76.0%
3948900 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 69.0 5.54e-01 100.0% 50.7%
3930711 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 64.0 6.24e-01 100.0% 86.7%
3288492 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.79 68.0 6.46e-01 100.0% 84.4%
3942514 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 66.0 6.16e-01 100.0% 78.0%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.79 67.0 4.91e-01 100.0% 36.2%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 66.0 5.63e-01 100.0% 58.5%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 64.0 6.02e-01 100.0% 76.0%
3376425 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.79 67.0 5.24e-01 100.0% 44.7%
3333780 4964.1.1.1 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A 0.78 64.0 4.45e-01 100.0% 27.1%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.78 64.0 6.19e-01 100.0% 86.7%
4460997 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.78 67.0 6.40e-01 100.0% 84.4%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 66.0 6.33e-01 100.0% 84.4%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 66.0 5.00e-01 100.0% 43.2%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.78 66.0 5.36e-01 100.0% 52.0%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.78 66.0 5.23e-01 100.0% 48.8%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 6.19e-01 100.0% 84.4%
4992527 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.78 66.0 5.22e-01 100.0% 48.8%
5014241 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.78 66.0 5.17e-01 100.0% 45.9%
5007028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 64.0 5.79e-01 100.0% 69.1%
3707219 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.77 64.0 4.61e-01 100.0% 31.7%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.76 63.0 4.94e-01 100.0% 43.3%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.76 62.0 5.07e-01 100.0% 48.8%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.76 62.0 4.95e-01 100.0% 44.7%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 62.0 5.36e-01 100.0% 60.0%
3579797 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 60.0 4.96e-01 100.0% 50.0%
4970237 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.75 63.0 6.04e-01 100.0% 86.7%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.75 61.0 5.15e-01 97.4% 54.3%
5061082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 6.22e-01 100.0% 100.0%
4175748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 61.0 4.95e-01 100.0% 47.5%
3781995 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 60.0 5.35e-01 100.0% 66.7%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 5.33e-01 100.0% 63.3%
3982095 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.74 62.0 4.72e-01 100.0% 39.8%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.74 58.0 3.58e-01 100.0% 13.9%
3469752 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.73 60.0 5.81e-01 100.0% 86.7%
4948834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 5.88e-01 100.0% 93.2%
3280379 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 62.0 4.63e-01 100.0% 38.0%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 59.0 5.40e-01 100.0% 69.1%
4142399 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 61.0 4.77e-01 100.0% 43.3%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.73 57.0 5.46e-01 100.0% 76.0%
3338097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 62.0 5.53e-01 100.0% 72.7%
5047812 101.29.1.0 alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.72 57.0 5.16e-01 100.0% 65.0%
4939633 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.71 59.0 5.16e-01 100.0% 60.3%
3410592 101.1.8.25 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq 0.71 59.0 5.38e-01 100.0% 69.1%
3424045 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 60.0 5.40e-01 100.0% 72.7%
3958096 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 4.36e-01 100.0% 43.3%
3985633 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.67 53.0 4.91e-01 100.0% 69.1%
4495608 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 51.0 4.86e-01 97.4% 78.0%