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MK448945.1__QBX28462.1__Javan454_0026__00026
Bact-VirMK448945.1__QBX28462.1__Javan454_0026__00026
Identity
- Accession:
- MK448945 ↗
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-57
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ad8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 43.0 | 2.80e-01 | 83.9% | 90.0% |
| 4cbgD02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 3.34e-01 | 96.4% | 74.5% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 37.0 | 2.83e-01 | 83.9% | 82.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495452 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 44.0 | 2.86e-01 | 85.7% | 35.9% |
| 3624740 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.57 | 42.0 | 2.92e-01 | 92.9% | 23.0% |
| 3977478 | 4056.1.1.9 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_portal_2 | 0.56 | 38.0 | 3.26e-01 | 78.6% | 40.0% |
| 3507247 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.54 | 40.0 | 2.61e-01 | 82.1% | 36.9% |
| 3222596 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.54 | 42.0 | 3.24e-01 | 100.0% | 36.3% |
| 5010552 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.52 | 41.0 | 3.23e-01 | 100.0% | 39.2% |
| 4342003 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.51 | 42.0 | 3.79e-01 | 100.0% | 67.5% |
| 5044066 | 3010.1.1.2 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › Lon_C | 0.51 | 37.0 | 3.08e-01 | 80.4% | 60.0% |
| 5019603 | 3010.1.1.0 ↗ | a/b three-layered sandwiches › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains › C-terminal subdomain in Lon-related proteases catalytic domains | 0.51 | 37.0 | 3.29e-01 | 85.7% | 67.4% |