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MK448950.1__QBX28737.1__Javan464_0022__00046
Bact-VirMK448950.1__QBX28737.1__Javan464_0022__00046
Identity
- Accession:
- MK448950 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-96
Domain cluster:
rep: NC_073317.1__YP_010749072.1__QCF72_gp16__00016__D4-119
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.77 | 71.0 | 6.65e-01 | 100.0% | 90.2% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.75 | 41.0 | 4.11e-01 | 70.7% | 53.8% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.74 | 41.0 | 4.16e-01 | 70.7% | 55.6% |
| 2pp6A02 | 2.40.10.210 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins (gpFII-like) | 0.74 | 48.0 | 5.79e-01 | 98.9% | 98.4% |
| 2w5eA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 44.0 | 5.06e-01 | 100.0% | 90.8% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 46.0 | 5.02e-01 | 100.0% | 86.5% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 49.0 | 3.96e-01 | 100.0% | 42.8% |
| 2cxkA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 38.0 | 3.95e-01 | 70.7% | 65.5% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.61 | 55.0 | 5.39e-01 | 96.7% | 100.0% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 48.0 | 4.80e-01 | 100.0% | 82.1% |
| 4gn1C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 36.0 | 3.09e-01 | 98.9% | 37.3% |
| 4djmA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 34.0 | 3.63e-01 | 70.7% | 65.0% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 54.0 | 4.82e-01 | 100.0% | 76.6% |
| 1eq9A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 51.0 | 4.71e-01 | 100.0% | 76.9% |
| 1azzA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 51.0 | 4.71e-01 | 100.0% | 77.3% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 45.0 | 4.51e-01 | 100.0% | 84.0% |
| 2zu2A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 44.0 | 4.34e-01 | 100.0% | 77.6% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.56 | 48.0 | 4.62e-01 | 98.9% | 89.0% |
| 2fgzA01 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.55 | 44.0 | 4.19e-01 | 90.2% | 79.1% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.55 | 36.0 | 3.45e-01 | 79.3% | 56.9% |
| 1elvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 49.0 | 4.40e-01 | 100.0% | 74.6% |
| 7z6eA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.63e-01 | 98.9% | 58.2% |
| 3nxpA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 48.0 | 3.87e-01 | 100.0% | 57.1% |
| 2a2jA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 47.0 | 3.63e-01 | 100.0% | 66.5% |
| 7v6bA01 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.52 | 44.0 | 4.11e-01 | 93.5% | 72.8% |
| 4m9fA00 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 45.0 | 3.58e-01 | 100.0% | 85.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 75.0 | 7.29e-01 | 100.0% | 94.0% |
| 119252 | 1.1.13.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join | 0.77 | 71.0 | 6.65e-01 | 100.0% | 90.2% |
| 4988096 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 68.0 | 6.36e-01 | 100.0% | 97.4% |
| 3973553 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 42.0 | 4.74e-01 | 70.7% | 72.9% |
| 3199895 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 41.0 | 4.07e-01 | 70.7% | 52.6% |
| 3587815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 67.0 | 6.47e-01 | 100.0% | 93.3% |
| 3975275 | 1.1.13.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gifsy-2 | 0.72 | 54.0 | 5.36e-01 | 100.0% | 74.7% |
| 4204303 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 40.0 | 4.13e-01 | 71.7% | 56.7% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 65.0 | 6.25e-01 | 100.0% | 97.1% |
| 5018347 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.69 | 49.0 | 4.08e-01 | 100.0% | 43.9% |
| 5003311 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 61.0 | 5.78e-01 | 100.0% | 97.3% |
| 3273438 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.66 | 39.0 | 4.07e-01 | 70.7% | 63.5% |
| 4273414 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.65 | 38.0 | 4.29e-01 | 72.8% | 75.7% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.64 | 58.0 | 5.90e-01 | 98.9% | 97.8% |
| 3247886 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 40.0 | 3.00e-01 | 72.8% | 25.3% |
| 4879695 | 1.1.13.29 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 | 0.62 | 57.0 | 5.03e-01 | 100.0% | 76.5% |
| 4038642 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.61 | 36.0 | 3.99e-01 | 71.7% | 74.3% |
| 3407221 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.61 | 54.0 | 4.05e-01 | 100.0% | 39.1% |
| 3752007 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.61 | 54.0 | 4.04e-01 | 100.0% | 40.9% |
| 3392280 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.61 | 52.0 | 3.83e-01 | 98.9% | 87.8% |
| 3843200 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.61 | 53.0 | 3.90e-01 | 100.0% | 38.6% |
| 4526316 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.61 | 41.0 | 4.13e-01 | 100.0% | 68.4% |
| 3272576 | 11.1.1.820 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd | 0.60 | 35.0 | 3.39e-01 | 70.7% | 48.2% |
| 3411245 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 51.0 | 3.73e-01 | 100.0% | 36.7% |
| 3412320 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.57 | 50.0 | 3.55e-01 | 100.0% | 44.5% |
| 3989341 | 12.2.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain | 0.57 | 33.0 | 3.99e-01 | 94.6% | 96.4% |
| 5023947 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.57 | 49.0 | 4.02e-01 | 95.7% | 85.3% |
| 3754984 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 40.0 | 3.14e-01 | 100.0% | 34.9% |
| 3485102 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.55 | 49.0 | 4.25e-01 | 100.0% | 64.8% |
| 3251518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.84e-01 | 77.2% | 67.6% |
| 3261363 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 39.0 | 3.72e-01 | 75.0% | 66.4% |
| 3385895 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 34.0 | 3.64e-01 | 78.3% | 72.5% |
| 134018 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 47.0 | 3.94e-01 | 100.0% | 93.8% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.52 | 33.0 | 3.39e-01 | 72.8% | 64.4% |
| 3408098 | 3369.1.1.0 ↗ | beta meanders › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 › lysosome-associated membrane protein LAMP-3 | 0.51 | 39.0 | 3.33e-01 | 80.4% | 75.3% |
| 3408870 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.51 | 44.0 | 4.14e-01 | 94.6% | 77.3% |