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MK448968.1__QBX29744.1__Javan512_0004__00050

Bact-Vir

MK448968.1__QBX29744.1__Javan512_0004__00050

Identity

Accession:
MK448968 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Streptococcus_phage_Javan512

TaxID: 2548226

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-98
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m1fB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.49e-01 100.0% 72.4%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.54 31.0 3.03e-01 92.2% 50.5%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.51 37.0 3.59e-01 97.8% 67.3%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.50 42.0 3.70e-01 92.2% 97.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4990980 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 41.0 4.11e-01 97.8% 64.2%
4932977 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.57 39.0 3.72e-01 93.3% 60.0%
3246086 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 32.0 3.17e-01 100.0% 54.7%
5012485 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.52 37.0 3.98e-01 100.0% 89.3%
3608102 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 32.0 3.54e-01 94.4% 80.0%